Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3943 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 7.5e-197 690.3 335 100.0
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 3.7e-95 352.4 225 81.8
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 6.6e-92 341.7 213 81.7
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 2.9e-87 326.2 168 92.9
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 1.9e-83 313.5 170 90.0
arahy.Tifrunner.gnm1.ann1.Y9E1XU Arachis hypogaea HOM05D003430 ORTHO05D004809 5.8e-80 302.0 172 85.5
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.3e-79 300.8 170 85.9
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 1.3e-79 300.8 170 85.9
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 1.3e-79 300.8 170 85.9
arahy.Tifrunner.gnm1.ann1.ZQA7LX Arachis hypogaea HOM05D003430 ORTHO05D004809 1.3e-79 300.8 174 83.3
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 1.3e-79 300.8 170 87.6
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 6.4e-79 298.5 170 85.9
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 6.4e-79 298.5 170 85.9
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.1e-78 297.7 170 85.3
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 1.4e-78 297.4 170 85.9
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 1.4e-78 297.4 170 85.9
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 1.4e-78 297.4 170 85.9
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 1.9e-78 297.0 171 84.2
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 7.0e-78 295.0 170 84.7
Sp3g25660 Schrenkiella parvula HOM05D003430 ORTHO05D004809 1.2e-77 294.3 170 85.3
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 7.8e-77 291.6 170 84.7
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 2.3e-76 290.0 168 83.9
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 2.5e-75 286.6 174 81.0
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 4.3e-75 285.8 170 82.9
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 7.3e-75 285.0 170 81.8
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 1.2e-74 284.3 170 82.9
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 1.2e-74 284.3 170 82.9
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 1.8e-73 280.4 170 82.9
VMungo0044G0003 Vigna mungo HOM05D003430 ORTHO05D004809 8.3e-71 271.6 154 85.1
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 1.4e-70 270.8 169 79.9
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 2.4e-70 270.0 150 86.7
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 3.2e-70 269.6 148 87.8
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 5.4e-70 268.9 151 85.4
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 2.7e-69 266.5 151 86.1
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 4.6e-69 265.8 151 84.8
Cpa.g.c41010 Carica papaya HOM05D003430 ORTHO05D004809 1.0e-68 264.6 153 84.3
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 2.3e-68 263.5 152 85.5
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 1.5e-67 260.8 157 80.3
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 1.5e-67 260.8 150 85.3
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 3.3e-67 259.6 151 83.4
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 4.3e-67 259.2 148 85.1
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.1e-66 256.9 145 84.1
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 3.6e-66 256.1 145 84.1
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 3.6e-66 256.1 154 81.8
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 6.2e-66 255.4 148 85.1
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 3.1e-65 253.1 150 82.7
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 3.1e-65 253.1 150 82.7
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 3.1e-65 253.1 150 82.7
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 3.1e-65 253.1 150 82.7
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 8.9e-65 251.5 150 82.0
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 8.9e-65 251.5 164 75.6
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 6.4e-63 245.4 145 82.1
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 2.4e-62 243.4 145 81.4
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 2.4e-62 243.4 145 81.4
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 6.0e-61 238.8 146 78.8
Lj2C1222T53 Lonicera japonica HOM05D003430 ORTHO05D004809 1.7e-60 237.3 180 69.4
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 2.5e-59 233.4 136 82.4
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 7.3e-59 231.9 150 76.7
Lj6g0002337 Lotus japonicus HOM05D003430 ORTHO05D004809 4.7e-58 229.2 172 70.9
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.1e-57 228.0 159 70.4
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 5.2e-57 225.7 170 68.8
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 1.4e-54 217.6 123 83.7
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 5.1e-52 209.1 126 81.7
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 7.3e-51 205.3 157 68.2
Solyc10g076630.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 7.6e-48 195.3 112 80.4
Nitab4.5_0000172g1130 Nicotiana tabacum HOM05D003430 ORTHO05D004809 4.9e-47 192.6 110 82.7
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 6.4e-47 192.2 174 62.6
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 1.5e-43 181.0 170 60.0
Pp3c4_28970 Physcomitrium patens HOM05D003430 ORTHO05D004809 9.0e-41 171.8 161 62.1
Pp3c4_28972 Physcomitrium patens HOM05D003430 ORTHO05D004809 9.0e-41 171.8 161 62.1
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 6.0e-37 159.1 88 87.5
Lalb_Chr21g0308991 Lupinus albus HOM05D002109 ORTHO05D002149 1.0e-36 158.3 91 85.7
Peaxi162Scf00456g00036 Petunia axillaris HOM05D003430 ORTHO05D004809 5.3e-33 146.0 88 81.8
SHI03773 Sapria himalayana HOM05D003430 ORTHO05D004809 5.0e-23 112.8 91 61.5
SHI04802 Sapria himalayana HOM05D003430 ORTHO05D004809 4.6e-21 106.3 67 77.6
SHI20518 Sapria himalayana HOM05D003430 ORTHO05D004809 2.5e-19 100.5 63 74.6
SalBow1G2589 Salvia bowleyana HOM05D003430 ORTHO05D004809 2.8e-18 97.1 53 90.6
Solyc03g013370.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.1e-17 93.6 54 79.6
SHI25675 Sapria himalayana HOM05D003430 ORTHO05D004809 1.3e-15 88.2 56 69.6
Solyc05g025700.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.7e-13 79.7 97 48.5
SGA_v2.0_scaffold178G39492 Striga asiatica HOM05D003430 ORTHO05D004809 6.1e-13 79.3 53 66.0
SHI32119 Sapria himalayana HOM05D003430 ORTHO05D004809 8.8e-12 75.5 64 60.9
SHI33657 Sapria himalayana HOM05D003430 ORTHO05D004809 8.2e-10 68.9 91 46.2
Prupe.5G026600 Prunus persica HOM05D003430 ORTHO05D004809 1.4e-09 68.2 72 55.6
Peaxi162Scf00160g00035 Petunia axillaris HOM05D004637 ORTHO05D005320 5.9e-08 62.8 32 87.5


User provided reference genes

Program Settings