Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3920 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 1.4e-114 416.4 221 100.0
CDE02G0362 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 1.1e-60 237.3 251 58.6
Cfa016913 Carpinus fangiana HOM05D001827 ORTHO05D001790 5.8e-20 102.1 255 34.1
RcHm_v2.0_Chr5g0076481 Rosa chinensis HOM05D001827 ORTHO05D001790 4.9e-19 99.0 255 32.9
FvH4_3g42741 Fragaria vesca HOM05D001827 ORTHO05D001790 8.3e-19 98.2 255 32.5
Haze_09842 Corylus avellana HOM05D001827 ORTHO05D001790 1.1e-18 97.8 255 32.5
Actinidia04995 Actinidia chinensis HOM05D001827 ORTHO05D001790 4.1e-18 95.9 251 33.5
CSS0027094 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 9.2e-18 94.7 251 35.1
Lj6g0015113 Lotus japonicus HOM05D001827 ORTHO05D001790 9.2e-18 94.7 251 31.9
Sabra16G0242100 Salix brachista HOM05D001827 ORTHO05D001790 1.3e-16 90.9 255 32.2
TAR626G1140 Trochodendron aralioides HOM05D001827 ORTHO05D001790 1.3e-16 90.9 206 35.9
ClCG10G004390 Citrullus lanatus HOM05D001827 ORTHO05D001790 2.3e-16 90.1 252 32.5
CsaV3_3G004170 Cucumis sativus L. HOM05D001827 ORTHO05D001790 2.3e-16 90.1 252 32.9
CDE02G3428 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 1.1e-15 87.8 248 31.9
TWI39G0045 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 1.1e-15 87.8 236 33.9
MELO3C014113.2 Cucumis melo HOM05D001827 ORTHO05D001790 1.5e-15 87.4 252 32.1
MD11G1032400 Malus domestica HOM05D001827 ORTHO05D001790 1.9e-15 87.0 239 31.4
PSO210G4928 Papaver somniferum HOM05D001827 ORTHO05D001790 4.3e-15 85.9 255 32.2
PSO210G6911 Papaver somniferum HOM05D001827 ORTHO05D001790 4.3e-15 85.9 255 31.8
Prupe.4G003200 Prunus persica HOM05D001827 ORTHO05D001790 3.6e-14 82.8 234 31.2
Dinv10348 Davidia involucrata HOM05D001827 ORTHO05D001790 6.2e-14 82.0 208 33.2
Medtr3g007920 Medicago truncatula HOM05D001827 ORTHO05D001790 1.8e-13 80.5 239 32.6
TAR629G2670 Trochodendron aralioides HOM05D001812 ORTHO05D001874 1.8e-13 80.5 208 33.2
CSS0010892 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 2.3e-13 80.1 249 32.5
Hma1.2p1_1516F.1_g288370 Hydrangea macrophylla HOM05D001827 ORTHO05D001790 2.3e-13 80.1 256 30.5
CiPaw.11G205100 Carya illinoinensis HOM05D001827 ORTHO05D001790 3.1e-13 79.7 207 31.9
MBI14_g13533_MAGBIO Magnolia biondii HOM05D001827 ORTHO05D001790 5.2e-13 79.0 248 29.4
Gohir.D13G135250 Gossypium hirsutum HOM05D001827 ORTHO05D001790 6.8e-13 78.6 243 32.9
Peaxi162Scf00139g01120 Petunia axillaris HOM05D001827 ORTHO05D001790 8.9e-13 78.2 239 31.0
Glyma.02G301400 Glycine max HOM05D001827 ORTHO05D001790 1.2e-12 77.8 247 30.4
Lalb_Chr15g0088281 Lupinus albus HOM05D001827 ORTHO05D001790 1.2e-12 77.8 218 30.7
Lalb_Chr18g0057361 Lupinus albus HOM05D001827 ORTHO05D001790 1.2e-12 77.8 218 30.3
FAN21G2473 Fragaria x ananassa HOM05D001827 ORTHO05D001790 1.5e-12 77.4 193 32.6
Gorai.013G151600 Gossypium raimondii HOM05D001827 ORTHO05D001790 2.0e-12 77.0 243 32.5
FAN16G2144 Fragaria x ananassa HOM05D001827 ORTHO05D001790 2.6e-12 76.6 209 31.6
Lj4g0001684 Lotus japonicus HOM05D001827 ORTHO05D001790 2.6e-12 76.6 201 34.3
Medtr5g096080 Medicago truncatula HOM05D001827 ORTHO05D001790 2.6e-12 76.6 239 31.8
QL05p067335 Quercus lobata HOM05D001827 ORTHO05D001790 3.4e-12 76.3 233 31.8
FAN11G2212 Fragaria x ananassa HOM05D001827 ORTHO05D001790 5.8e-12 75.5 193 32.1
FAN25G2361 Fragaria x ananassa HOM05D001827 ORTHO05D001790 5.8e-12 75.5 193 32.1
CAN.G623.22 Capsicum annuum HOM05D001827 ORTHO05D001790 7.6e-12 75.1 239 30.5
Nn1g07551 Nelumbo nucifera HOM05D001827 ORTHO05D001790 1.3e-11 74.3 196 32.1
MD05G1362200 Malus domestica HOM05D001827 ORTHO05D001790 1.7e-11 73.9 215 31.6
HPP92_003813 Vanilla planifolia HOM05D001827 ORTHO05D001790 2.2e-11 73.6 210 32.4
Ca_20990_v3 Cicer arietinum L. HOM05D000879 ORTHO05D001790 2.9e-11 73.2 208 34.6
TWI38G0190 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 2.9e-11 73.2 196 30.6
CDE01G0404 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 3.8e-11 72.8 153 34.0
Rhsim06G0231100 Rhododendron simsii HOM05D001827 ORTHO05D001790 3.8e-11 72.8 206 31.6
Hma1.2p1_1094F.1_g256430 Hydrangea macrophylla HOM05D001827 ORTHO05D001790 4.9e-11 72.4 190 32.6
TWI38G2079 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 8.4e-11 71.6 205 30.7
TAR517G0009 Trochodendron aralioides HOM05D001827 ORTHO05D001790 1.1e-10 71.2 163 32.5
Eucgr.F02039 Eucalyptus grandis HOM05D001827 ORTHO05D001790 1.4e-10 70.9 205 31.7
Sed0007556 Sechium edule HOM05D001827 ORTHO05D001790 1.9e-10 70.5 224 32.6
Thecc.06G241600 Theobroma cacao HOM05D001827 ORTHO05D001790 1.9e-10 70.5 219 32.4
TPR.G8584 Trifolium pratense HOM05D001827 ORTHO05D001790 1.9e-10 70.5 217 33.2
Ah.06g180970 Amaranthus hybridus HOM05D001827 ORTHO05D001790 2.4e-10 70.1 238 30.3
arahy.Tifrunner.gnm1.ann1.U3UNQX Arachis hypogaea HOM05D001827 ORTHO05D001790 2.4e-10 70.1 206 30.6
PGR083G1584 Punica granatum HOM05D001827 ORTHO05D001790 3.2e-10 69.7 206 31.1
vmacro11602 Vaccinium macrocarpon HOM05D001827 ORTHO05D001790 5.4e-10 68.9 206 32.0
arahy.Tifrunner.gnm1.ann1.UDIE03 Arachis hypogaea HOM05D001827 ORTHO05D001790 7.1e-10 68.6 205 30.2
Oeu046939.1 Olea europaea HOM05D001827 ORTHO05D001790 7.1e-10 68.6 229 31.4
Atru.chr2.3710 Acer truncatum HOM05D001827 ORTHO05D001790 9.2e-10 68.2 196 29.1
Sed0003258 Sechium edule HOM05D001827 ORTHO05D001790 1.2e-09 67.8 217 32.3
CANSAT11G0161 Cannabis sativa HOM05D001827 ORTHO05D001790 1.6e-09 67.4 206 32.0
Lj6A253T11 Lonicera japonica HOM05D001827 ORTHO05D001790 1.6e-09 67.4 219 28.3
MD03G1029200 Malus domestica HOM05D001827 ORTHO05D001790 1.6e-09 67.4 206 30.1
Duzib268G1786 Durio zibethinus HOM05D001827 ORTHO05D001790 2.1e-09 67.0 229 31.0
CiPaw.12G139200 Carya illinoinensis HOM05D001827 ORTHO05D001790 2.7e-09 66.6 207 30.0
Potri.001G369200 Populus trichocarpa HOM05D001827 ORTHO05D001790 2.7e-09 66.6 208 30.3
Sc03g0011630 Simmondsia chinensis HOM05D001827 ORTHO05D001790 2.7e-09 66.6 257 27.6
Sopen07g033890 Solanum pennellii HOM05D001827 ORTHO05D001790 2.7e-09 66.6 259 27.8
TWI77G0847 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 2.7e-09 66.6 218 29.4
SGA_v2.0_scaffold42G15974 Striga asiatica HOM05D001827 ORTHO05D001790 3.5e-09 66.2 236 30.1
TPR.G5995 Trifolium pratense HOM05D001827 ORTHO05D001790 3.5e-09 66.2 208 32.7
AUR62017147 Chenopodium quinoa HOM05D001827 ORTHO05D001790 4.6e-09 65.9 238 30.7
Rhsim02G0090400 Rhododendron simsii HOM05D001827 ORTHO05D001790 4.6e-09 65.9 216 29.2
Sed0000061 Sechium edule HOM05D001827 ORTHO05D001790 4.6e-09 65.9 197 29.9
Ciclev10007701m.g Citrus clementina HOM05D001827 ORTHO05D001790 6.0e-09 65.5 208 29.8
Duzib235G1271 Durio zibethinus HOM05D001827 ORTHO05D001790 6.0e-09 65.5 226 28.8
Glyma.09G015000 Glycine max HOM05D001827 ORTHO05D001790 6.0e-09 65.5 189 30.2
Solyc07g065680.3 Solanum lycopersicum HOM05D001827 ORTHO05D001790 6.0e-09 65.5 259 28.2
AUR62035660 Chenopodium quinoa HOM05D001827 ORTHO05D001790 7.8e-09 65.1 231 31.2
Phvul.008G279900 Phaseolus vulgaris HOM05D001827 ORTHO05D001790 7.8e-09 65.1 205 30.7
PGSC0003DMG400022271 Solanum tuberosum HOM05D001827 ORTHO05D001790 7.8e-09 65.1 259 27.4
Lalb_Chr13g0304391 Lupinus albus HOM05D001827 ORTHO05D001790 1.0e-08 64.7 216 29.2
Nitab4.5_0004583g0090 Nicotiana tabacum HOM05D001827 ORTHO05D001790 1.3e-08 64.3 239 28.5
COL.COLO4_09854 Corchorus olitorius HOM05D001827 ORTHO05D001790 1.7e-08 63.9 176 31.8
Gohir.D01G077200 Gossypium hirsutum HOM05D001827 ORTHO05D001790 1.7e-08 63.9 189 31.2
Gorai.002G101700 Gossypium raimondii HOM05D001827 ORTHO05D001790 1.7e-08 63.9 189 31.2
Haze_07028 Corylus avellana HOM05D001827 ORTHO05D001790 2.3e-08 63.5 210 29.5
Atru.chr1.2237 Acer truncatum HOM05D001827 ORTHO05D001790 3.0e-08 63.2 245 29.0
Atru.chr1.2239 Acer truncatum HOM05D001827 ORTHO05D001790 3.0e-08 63.2 245 29.0
Gohir.A01G092700 Gossypium hirsutum HOM05D001827 ORTHO05D001790 3.0e-08 63.2 189 31.2
arahy.Tifrunner.gnm1.ann1.L4SZG2 Arachis hypogaea HOM05D001827 ORTHO05D001790 3.9e-08 62.8 223 28.7
Cpa.g.sc12.122 Carica papaya HOM05D001827 ORTHO05D001790 3.9e-08 62.8 236 29.2
Ciclev10014746m.g Citrus clementina HOM05D001827 ORTHO05D001790 3.9e-08 62.8 240 30.8
Lalb_Chr12g0195931 Lupinus albus HOM05D001827 ORTHO05D001790 6.6e-08 62.0 219 29.7
vmacro15728 Vaccinium macrocarpon HOM05D001827 ORTHO05D001790 6.6e-08 62.0 232 27.6
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 8.6e-08 61.6 206 30.6
Medtr2g027130 Medicago truncatula HOM05D001827 ORTHO05D001790 8.6e-08 61.6 178 28.1
Medtr4g134110 Medicago truncatula HOM05D001827 ORTHO05D001790 8.6e-08 61.6 225 29.8
CARHR012500 Cardamine hirsuta HOM05D001827 ORTHO05D001790 1.1e-07 61.2 237 29.5
Ca_06402_v3 Cicer arietinum L. HOM05D001827 ORTHO05D001790 1.1e-07 61.2 223 29.6
arahy.Tifrunner.gnm1.ann1.L6LFU0 Arachis hypogaea HOM05D001827 ORTHO05D001790 1.5e-07 60.8 223 28.3
Gohir.D05G384900 Gossypium hirsutum HOM05D001827 ORTHO05D001790 1.5e-07 60.8 206 29.6
Thecc.07G010300 Theobroma cacao HOM05D001827 ORTHO05D001790 1.5e-07 60.8 188 30.9
EL10Ac4g07523 Beta vulgaris HOM05D001827 ORTHO05D001790 1.9e-07 60.5 238 29.0
Duzib213G1002 Durio zibethinus HOM05D001827 ORTHO05D001790 1.9e-07 60.5 187 31.6
Eucgr.L01393 Eucalyptus grandis HOM05D001827 ORTHO05D001790 1.9e-07 60.5 240 27.5
Gorai.009G451600 Gossypium raimondii HOM05D001827 ORTHO05D001790 1.9e-07 60.5 205 29.8
Gohir.A10G007800 Gossypium hirsutum HOM05D001827 ORTHO05D001790 2.5e-07 60.1 243 27.6
VMungo0647G0995 Vigna mungo HOM05D001827 ORTHO05D001790 2.5e-07 60.1 189 30.2
HPP92_020565 Vanilla planifolia HOM05D001827 ORTHO05D001790 3.3e-07 59.7 219 31.1
A09p64060 Brassica napus HOM05D001827 ORTHO05D001790 4.3e-07 59.3 200 29.5
Lj6A248T28 Lonicera japonica HOM05D001827 ORTHO05D001790 4.3e-07 59.3 206 27.2
AL1G23420 Arabidopsis lyrata HOM05D001827 ORTHO05D001790 5.6e-07 58.9 217 28.6
ClCG01G011200 Citrullus lanatus HOM05D001827 ORTHO05D001790 5.6e-07 58.9 184 27.7
Eucgr.E03845 Eucalyptus grandis HOM05D001827 ORTHO05D001790 5.6e-07 58.9 240 27.1
Thhalv10007286m.g Eutrema salsugineum HOM05D001827 ORTHO05D001790 5.6e-07 58.9 200 29.0
Medtr3g060660 Medicago truncatula HOM05D001827 ORTHO05D001790 5.6e-07 58.9 178 28.1
Psat2g006880 Pisum sativum HOM05D001827 ORTHO05D001790 5.6e-07 58.9 217 30.9
Aa31LG5G11980 Aethionema arabicum HOM05D001812 ORTHO05D001874 7.3e-07 58.5 255 26.7
BcaNung05493 Brassica carinata HOM05D001827 ORTHO05D001790 9.6e-07 58.2 200 29.0
AT1G12150 Arabidopsis thaliana HOM05D001827 ORTHO05D001790 1.2e-06 57.8 217 29.0
MSTRG.14494 Avicennia marina HOM05D001827 ORTHO05D001790 1.2e-06 57.8 175 29.7
MELO3C026089.2 Cucumis melo HOM05D001827 ORTHO05D001790 1.2e-06 57.8 180 27.8
Lj6C241T4 Lonicera japonica HOM05D001827 ORTHO05D001790 1.2e-06 57.8 206 26.7
Gohir.D10G007700 Gossypium hirsutum HOM05D001827 ORTHO05D001790 1.6e-06 57.4 241 27.0
Gorai.011G008400 Gossypium raimondii HOM05D001827 ORTHO05D001790 1.6e-06 57.4 241 27.0
Sp1g10820 Schrenkiella parvula HOM05D001827 ORTHO05D001790 2.8e-06 56.6 200 29.0
QL05p066984 Quercus lobata HOM05D001827 ORTHO05D001790 3.6e-06 56.2 232 26.3
C08p47640 Brassica napus HOM05D001827 ORTHO05D001790 4.7e-06 55.8 196 28.6
BraA09t41752Z Brassica rapa HOM05D001827 ORTHO05D001790 4.7e-06 55.8 196 28.6
RcHm_v2.0_Chr5g0000421 Rosa chinensis HOM05D001827 ORTHO05D001790 6.2e-06 55.5 180 26.1
Psat1g172320 Pisum sativum HOM05D001827 ORTHO05D001790 8.1e-06 55.1 181 26.5


User provided reference genes

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