Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 2.9e-174 615.1 313 100.0
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 2.8e-89 332.8 407 46.7
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 1.6e-87 327.0 409 45.0
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 5.9e-87 325.1 402 46.0
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 2.9e-86 322.8 400 46.5
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 9.5e-85 317.8 409 44.7
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 1.6e-84 317.0 405 44.9
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 2.3e-83 313.2 403 44.9
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 3.1e-83 312.8 404 45.3
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 2.6e-82 309.7 408 44.6
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 4.4e-82 308.9 408 45.1
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 5.8e-82 308.5 411 44.5
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 4.9e-81 305.4 409 44.3
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 1.1e-80 304.3 409 44.0
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 2.4e-80 303.1 410 43.7
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 5.4e-80 302.0 407 43.2
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 1.0e-78 297.7 405 44.4
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 1.3e-78 297.4 377 44.3
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 6.6e-78 295.0 406 42.6
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 8.6e-78 294.7 369 45.5
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 1.1e-77 294.3 358 46.6
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 1.1e-77 294.3 407 42.8
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 1.9e-77 293.5 407 42.5
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 1.9e-77 293.5 409 43.0
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 2.5e-77 293.1 378 43.7
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 3.3e-77 292.7 366 44.8
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 3.3e-77 292.7 376 44.1
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 7.3e-77 291.6 407 42.3
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 7.3e-77 291.6 381 44.1
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 1.2e-76 290.8 372 44.9
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.8e-76 289.7 281 55.5
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 2.8e-76 289.7 400 43.5
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 2.8e-76 289.7 372 43.8
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 4.7e-76 288.9 372 43.8
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 4.7e-76 288.9 378 43.9
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 6.2e-76 288.5 362 45.0
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 1.1e-75 287.7 415 42.4
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.4e-75 287.3 366 44.0
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 3.1e-75 286.2 278 54.7
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 3.1e-75 286.2 371 42.9
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 4.0e-75 285.8 366 43.7
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 5.2e-75 285.4 406 42.6
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 6.8e-75 285.0 379 44.9
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 6.8e-75 285.0 370 44.3
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 1.5e-74 283.9 370 44.6
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 2.6e-74 283.1 282 54.6
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 9.8e-74 281.2 421 41.1
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 1.3e-73 280.8 376 44.4
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 1.4e-72 277.3 366 44.8
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 2.4e-72 276.6 360 42.8
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 3.5e-71 272.7 361 42.4
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 3.0e-70 269.6 327 45.9
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 3.0e-70 269.6 445 40.0
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 3.9e-70 269.2 383 42.3
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 3.9e-70 269.2 375 41.9
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 5.1e-70 268.9 425 39.5
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 6.6e-70 268.5 393 40.2
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 8.6e-70 268.1 366 41.3
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 8.6e-70 268.1 376 41.2
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 1.5e-69 267.3 375 41.3
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 2.5e-69 266.5 399 40.1
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.6e-68 263.8 409 40.8
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 4.7e-68 262.3 375 40.3
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 6.2e-68 261.9 413 39.5
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 8.1e-68 261.5 359 42.9
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 1.8e-67 260.4 376 39.1
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 3.1e-67 259.6 355 43.1
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 1.5e-66 257.3 373 39.4
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 7.5e-66 255.0 369 41.7
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 9.9e-66 254.6 360 42.2
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 1.7e-65 253.8 355 42.5
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.4e-64 250.8 365 40.8
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 1.4e-64 250.8 359 41.8
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 1.9e-64 250.4 355 42.3
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 2.4e-64 250.0 372 37.6
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 5.4e-64 248.8 362 39.8
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 7.1e-64 248.4 368 40.5
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 2.1e-63 246.9 337 42.4
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 4.6e-63 245.7 362 39.2
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 4.6e-63 245.7 427 38.4
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 1.0e-62 244.6 352 41.8
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 5.1e-62 242.3 436 36.5
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 3.3e-61 239.6 371 38.3
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 7.3e-61 238.4 356 40.2
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 4.7e-60 235.7 368 40.8
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 1.8e-59 233.8 356 39.6
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 1.8e-59 233.8 356 39.9
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 2.4e-59 233.4 356 40.7
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 3.1e-59 233.0 362 37.6
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 5.2e-59 232.3 356 39.6
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 4.4e-58 229.2 367 39.5
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 1.7e-57 227.3 356 39.0
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 8.4e-57 224.9 368 38.6
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 1.1e-53 214.5 319 42.3
Pp3c15_14160 Physcomitrium patens HOM05D005911 ORTHO05D007565 3.3e-53 213.0 239 49.0
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 3.8e-49 199.5 378 35.4
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 6.4e-49 198.7 322 38.2
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.1e-48 198.0 322 37.9
CBR_g27891 Chara braunii HOM05D005911 ORTHO05D007565 3.5e-47 193.0 201 46.8
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 3.3e-45 186.4 304 37.2
CARHR039360 Cardamine hirsuta HOM05D005911 ORTHO05D007565 3.6e-44 183.0 205 46.3
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 4.9e-41 172.6 350 34.6
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 1.9e-40 170.6 288 37.2
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 3.2e-40 169.9 280 37.5
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 1.2e-39 167.9 301 35.5
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 1.0e-38 164.9 302 36.1
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 3.1e-35 153.3 337 34.4
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 6.9e-35 152.1 297 33.3
Gorai.008G153200 Gossypium raimondii HOM05D005911 ORTHO05D007565 1.3e-33 147.9 151 50.3
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea HOM05D005911 ORTHO05D007565 7.9e-31 138.7 266 36.5
MCO11G507 Micromonas commoda HOM05D005911 ORTHO05D007565 8.7e-30 135.2 213 36.6
Cre17.g701100 Chlamydomonas reinhardtii HOM05D005911 ORTHO05D007565 3.3e-29 133.3 201 38.8
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis HOM05D005911 ORTHO05D007565 1.0e-25 121.7 123 47.2
Nitab4.5_0000776g0050 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.7e-25 120.9 111 52.3
Ciclev10013569m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.1e-24 118.2 73 74.0
PRCOL_00000481 Prasinoderma coloniale HOM05D005911 ORTHO05D007565 1.1e-21 108.2 208 30.3
Ciclev10003801m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.9e-21 107.5 104 52.9
Lj9A367G53 Lonicera japonica HOM05D005911 ORTHO05D007565 3.7e-20 103.2 87 59.8
Eucgr.G01892 Eucalyptus grandis HOM05D005911 ORTHO05D007565 2.4e-19 100.5 124 46.0
Sc14g0001900 Simmondsia chinensis HOM05D005911 ORTHO05D007565 1.2e-18 98.2 96 53.1
Ciclev10018182m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.5e-18 97.8 85 57.6
Ah.01g006180 Amaranthus hybridus HOM05D002934 ORTHO05D003937 2.5e-16 90.5 273 34.1
Eucgr.G00468 Eucalyptus grandis HOM05D005911 ORTHO05D007565 2.1e-15 87.4 236 31.8
Gohir.D04G144225 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.4e-14 84.7 70 58.6
Gorai.012G129900 Gossypium raimondii HOM05D005911 ORTHO05D007565 1.4e-14 84.7 70 58.6
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 2.3e-14 84.0 354 25.4
A05p20720 Brassica napus HOM05D005911 ORTHO05D007565 2.3e-06 57.4 46 65.2
BraA05t20979Z Brassica rapa HOM05D005911 ORTHO05D007565 2.3e-06 57.4 46 65.2
CARHR039340 Cardamine hirsuta HOM05D005911 ORTHO05D007565 8.8e-06 55.5 46 65.2


User provided reference genes

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