Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3860 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 5.6e-43 177.2 88 100.0
CDE11G0572 Ceratophyllum demersum HOM05D006948 ORTHO05D008703 6.9e-41 170.2 88 95.5
PSO732G0264 Papaver somniferum HOM05D006948 ORTHO05D008703 1.2e-21 106.3 89 59.6
ATR0057G003 Amborella trichopoda HOM05D006948 ORTHO05D008703 2.7e-21 105.1 85 60.0
PSO675G6563 Papaver somniferum HOM05D006948 ORTHO05D008703 5.1e-20 100.9 78 64.1
Dinv43640 Davidia involucrata HOM05D006948 ORTHO05D008703 6.3e-18 94.0 75 61.3
Nn1g00906 Nelumbo nucifera HOM05D006948 ORTHO05D008703 3.1e-17 91.7 79 62.0
Hund17076 Selenicereus undatus HOM05D006948 ORTHO05D008703 4.1e-17 91.3 78 61.5
Aqoxy7G00836 Aquilegia oxysepala HOM05D006948 ORTHO05D008703 1.5e-16 89.4 87 51.7
Cc00_g20460 Coffea canephora HOM05D006948 ORTHO05D008703 2.6e-16 88.6 85 57.6
Manes.05G052600 Manihot esculenta HOM05D006948 ORTHO05D008703 4.5e-16 87.8 80 56.2
Cfa012992 Carpinus fangiana HOM05D006948 ORTHO05D008703 1.0e-15 86.7 77 57.1
CiPaw.13G028600 Carya illinoinensis HOM05D006948 ORTHO05D008703 1.7e-15 85.9 85 54.1
AUR62023432 Chenopodium quinoa HOM05D006948 ORTHO05D008703 2.2e-15 85.5 77 58.4
Peaxi162Scf00392g00125 Petunia axillaris HOM05D006948 ORTHO05D008703 3.8e-15 84.7 77 58.4
Nitab4.5_0001818g0020 Nicotiana tabacum HOM05D006948 ORTHO05D008703 8.5e-15 83.6 77 58.4
Ciclev10023020m.g Citrus clementina HOM05D006948 ORTHO05D008703 1.1e-14 83.2 77 58.4
EL10Ac1g00789 Beta vulgaris HOM05D006948 ORTHO05D008703 1.4e-14 82.8 75 57.3
Solyc01g090500.4 Solanum lycopersicum HOM05D006948 ORTHO05D008703 1.9e-14 82.4 77 57.1
TWI59G0066 Tripterygium wilfordii HOM05D006948 ORTHO05D008703 1.9e-14 82.4 77 54.5
SEGI_25204 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 2.5e-14 82.0 73 54.8
SEGI_39218 Sequoiadendron giganteum HOM05D006948 ORTHO05D008703 2.5e-14 82.0 73 54.8
Actinidia12660 Actinidia chinensis HOM05D006948 ORTHO05D008703 3.2e-14 81.6 75 56.0
Atru.chr4.2323 Acer truncatum HOM05D006948 ORTHO05D008703 4.2e-14 81.3 79 59.5
Sopen01g036290 Solanum pennellii HOM05D006948 ORTHO05D008703 4.2e-14 81.3 77 57.1
Cpa.g.sc5.223 Carica papaya HOM05D006948 ORTHO05D008703 5.5e-14 80.9 85 52.9
Rhsim01G0137500 Rhododendron simsii HOM05D006948 ORTHO05D008703 5.5e-14 80.9 73 57.5
HPP92_014505 Vanilla planifolia HOM05D006948 ORTHO05D008703 5.5e-14 80.9 70 60.0
CSS0003978 Camellia sinensis var. sinensis HOM05D006948 ORTHO05D008703 7.2e-14 80.5 74 56.8
Aa31LG10G14620 Aethionema arabicum HOM05D006948 ORTHO05D008703 1.2e-13 79.7 77 53.2
Gorai.004G039500 Gossypium raimondii HOM05D006948 ORTHO05D008703 1.2e-13 79.7 83 54.2
MD00G1058900 Malus domestica HOM05D006948 ORTHO05D008703 1.6e-13 79.3 82 51.2
Prupe.2G124300 Prunus persica HOM05D006948 ORTHO05D008703 1.6e-13 79.3 85 51.8
Duzib138G1111 Durio zibethinus HOM05D006948 ORTHO05D008703 2.1e-13 79.0 77 54.5
RcHm_v2.0_Chr1g0346581 Rosa chinensis HOM05D006948 ORTHO05D008703 2.1e-13 79.0 78 51.3
Gohir.A08G029800 Gossypium hirsutum HOM05D006948 ORTHO05D008703 2.7e-13 78.6 83 53.0
CsaV3_3G007550 Cucumis sativus L. HOM05D006948 ORTHO05D008703 3.6e-13 78.2 77 55.8
THA.LOC104817199 Tarenaya hassleriana HOM05D006948 ORTHO05D008703 3.6e-13 78.2 76 56.6
Thecc.01G389700 Theobroma cacao HOM05D006948 ORTHO05D008703 3.6e-13 78.2 77 54.5
CANSAT21G1424 Cannabis sativa HOM05D006948 ORTHO05D008703 4.6e-13 77.8 77 55.8
Hma1.2p1_1740F.1_g300040 Hydrangea macrophylla HOM05D006948 ORTHO05D008703 4.6e-13 77.8 71 57.7
Gohir.D08G040600 Gossypium hirsutum HOM05D006948 ORTHO05D008703 6.1e-13 77.4 83 53.0
HanXRQChr06g0168761 Helianthus annuus HOM05D006948 ORTHO05D008703 6.1e-13 77.4 74 58.1
SGA_v2.0_scaffold43G16525 Striga asiatica HOM05D006948 ORTHO05D008703 7.9e-13 77.0 73 54.8
COL.COLO4_12436 Corchorus olitorius HOM05D006948 ORTHO05D008703 1.4e-12 76.3 77 51.9
Os04g0549400 Oryza sativa ssp. japonica HOM05D006948 ORTHO05D008703 1.4e-12 76.3 77 50.6
FAN01G0218 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.8e-12 75.9 78 48.7
FAN03G2439 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.8e-12 75.9 78 48.7
Lsat_1_v5_gn_7_10441 Lactuca sativa HOM05D006948 ORTHO05D008703 1.8e-12 75.9 74 54.1
Potri.014G054300 Populus trichocarpa HOM05D006948 ORTHO05D008703 1.8e-12 75.9 78 52.6
Zm00001eb429840 Zea mays HOM05D006948 ORTHO05D008703 1.8e-12 75.9 77 51.9
AUR62018049 Chenopodium quinoa HOM05D006948 ORTHO05D008703 2.3e-12 75.5 69 59.4
PGR042G1623 Punica granatum HOM05D006948 ORTHO05D008703 2.3e-12 75.5 78 51.3
Medtr7g446140 Medicago truncatula HOM05D006948 ORTHO05D008703 3.0e-12 75.1 97 45.4
ECA236G1236 Erigeron canadensis HOM05D006948 ORTHO05D008703 5.1e-12 74.3 74 54.1
Sabra14G0040200 Salix brachista HOM05D006948 ORTHO05D008703 5.1e-12 74.3 78 51.3
ATR0767G212 Amborella trichopoda HOM05D006948 ORTHO05D008703 8.8e-12 73.6 61 55.7
FvH4_7g09680 Fragaria vesca HOM05D006948 ORTHO05D008703 8.8e-12 73.6 78 47.4
FAN06G1163 Fragaria x ananassa HOM05D006948 ORTHO05D008703 8.8e-12 73.6 78 47.4
FAN06G4415 Fragaria x ananassa HOM05D006948 ORTHO05D008703 8.8e-12 73.6 78 47.4
Glyma.01G074400 Glycine max HOM05D006948 ORTHO05D008703 8.8e-12 73.6 91 46.2
Thecc.01G390200 Theobroma cacao HOM05D006948 ORTHO05D008703 8.8e-12 73.6 74 52.7
Ca_27396_v3 Cicer arietinum L. HOM05D006948 ORTHO05D008703 1.5e-11 72.8 96 45.8
FAN10G3172 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.5e-11 72.8 78 46.2
FAN10G3965 Fragaria x ananassa HOM05D006948 ORTHO05D008703 1.5e-11 72.8 78 46.2
MSTRG.28159 Avicennia marina HOM05D006948 ORTHO05D008703 2.0e-11 72.4 74 51.4
TPR.G39099 Trifolium pratense HOM05D006948 ORTHO05D008703 2.5e-11 72.0 87 47.1
AT3G60480 Arabidopsis thaliana HOM05D006948 ORTHO05D008703 4.3e-11 71.2 86 47.7
Lalb_Chr19g0126621 Lupinus albus HOM05D006948 ORTHO05D008703 4.3e-11 71.2 89 47.2
arahy.Tifrunner.gnm1.ann1.96FU63 Arachis hypogaea HOM05D006948 ORTHO05D008703 7.4e-11 70.5 79 49.4
arahy.Tifrunner.gnm1.ann1.9NP6XU Arachis hypogaea HOM05D006948 ORTHO05D008703 7.4e-11 70.5 79 49.4
BcaC07g40567 Brassica carinata HOM05D006948 ORTHO05D008703 7.4e-11 70.5 81 49.4
C08p35470 Brassica napus HOM05D006948 ORTHO05D008703 7.4e-11 70.5 81 49.4
Carub.0005s2721 Capsella rubella HOM05D006948 ORTHO05D008703 7.4e-11 70.5 81 48.1
AL5G42750 Arabidopsis lyrata HOM05D006948 ORTHO05D008703 9.7e-11 70.1 81 48.1
BcaC07g40569 Brassica carinata HOM05D006948 ORTHO05D008703 1.7e-10 69.3 81 48.1
VMungo1383G1377 Vigna mungo HOM05D006948 ORTHO05D008703 2.2e-10 68.9 81 46.9
Lj1g0016170 Lotus japonicus HOM05D006948 ORTHO05D008703 2.8e-10 68.6 82 45.1
CARHR170860 Cardamine hirsuta HOM05D006948 ORTHO05D008703 3.7e-10 68.2 81 46.9
Eucgr.E01580 Eucalyptus grandis HOM05D006948 ORTHO05D008703 4.8e-10 67.8 75 49.3
Sed0014312 Sechium edule HOM05D006948 ORTHO05D008703 4.8e-10 67.8 95 44.2
Sp5g02740 Schrenkiella parvula HOM05D006948 ORTHO05D008703 8.2e-10 67.0 81 48.1
BcaC07g42775 Brassica carinata HOM05D006948 ORTHO05D008703 3.1e-09 65.1 79 48.1
BolC8t51138H Brassica oleracea HOM05D006948 ORTHO05D008703 3.1e-09 65.1 79 48.1
Haze_02785 Corylus avellana HOM05D006948 ORTHO05D008703 3.1e-09 65.1 58 55.2
Haze_02790 Corylus avellana HOM05D006948 ORTHO05D008703 4.1e-09 64.7 58 55.2
Migut.O00539 Erythranthe guttata HOM05D006948 ORTHO05D008703 2.0e-08 62.4 74 45.9
Migut.N01755 Erythranthe guttata HOM05D006948 ORTHO05D008703 2.6e-08 62.0 74 45.9
MD07G1101200 Malus domestica HOM05D006948 ORTHO05D008703 2.6e-08 62.0 75 45.3
Phvul.008G140300 Phaseolus vulgaris HOM05D006948 ORTHO05D008703 3.4e-08 61.6 99 38.4
Pp3c5_22300 Physcomitrium patens HOM05D006948 ORTHO05D008703 4.5e-08 61.2 77 36.4
Thecc.01G390600 Theobroma cacao HOM05D006948 ORTHO05D008703 7.7e-08 60.5 48 62.5
Haze_24986 Corylus avellana HOM05D006948 ORTHO05D008703 1.0e-07 60.1 58 53.4
PGSC0003DMG401026039 Solanum tuberosum HOM05D006948 ORTHO05D008703 1.7e-07 59.3 59 50.8
TAR629G0288 Trochodendron aralioides HOM05D006948 ORTHO05D000005 1.7e-07 59.3 55 56.4
QL04p032282 Quercus lobata HOM05D006948 ORTHO05D008703 2.2e-07 58.9 58 55.2
unitig_0.g2760 Utricularia gibba HOM05D006948 ORTHO05D008703 3.8e-07 58.2 64 54.7
QL04p032169 Quercus lobata HOM05D006948 ORTHO05D008703 6.5e-07 57.4 58 51.7
QL04p033225 Quercus lobata HOM05D006948 ORTHO05D008703 6.5e-07 57.4 58 51.7
A09p52730 Brassica napus HOM05D006948 ORTHO05D008703 8.5e-07 57.0 107 37.4
SHI13603 Sapria himalayana HOM05D006948 ORTHO05D008703 8.5e-07 57.0 58 50.0
QL04p031942 Quercus lobata HOM05D006948 ORTHO05D008703 1.1e-06 56.6 58 51.7
MELO3C005977.2 Cucumis melo HOM05D006948 ORTHO05D008703 1.4e-06 56.2 66 48.5
QL04p033368 Quercus lobata HOM05D006948 ORTHO05D008703 1.9e-06 55.8 58 50.0
Sc23g0003950 Simmondsia chinensis HOM05D006948 ORTHO05D008703 1.9e-06 55.8 54 53.7
AUR62013722 Chenopodium quinoa HOM05D006948 ORTHO05D008703 2.5e-06 55.5 56 55.4
Nitab4.5_0002874g0090 Nicotiana tabacum HOM05D006948 ORTHO05D008703 4.2e-06 54.7 58 51.7
DCAR_025075 Daucus carota HOM05D006948 ORTHO05D008703 9.4e-06 53.5 60 48.3


User provided reference genes

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