Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 7.5e-224 781.6 741 100.0
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 2.4e-52 211.8 251 49.0
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 5.9e-51 207.2 203 56.2
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 6.5e-50 203.8 767 62.2
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 7.2e-49 200.3 217 51.2
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 8.8e-47 193.4 201 52.7
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 1.5e-46 192.6 197 53.3
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 2.0e-46 192.2 227 48.0
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 1.3e-45 189.5 207 48.8
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 1.7e-45 189.1 199 50.3
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 1.7e-45 189.1 200 50.5
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 1.7e-45 189.1 241 46.1
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 4.8e-45 187.6 223 47.5
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 6.3e-45 187.2 241 44.0
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 6.3e-45 187.2 207 49.8
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 8.2e-45 186.8 203 49.3
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 1.1e-44 186.4 197 51.8
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 1.4e-44 186.0 166 57.8
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 1.4e-44 186.0 243 42.8
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 3.1e-44 184.9 211 49.3
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 3.1e-44 184.9 243 42.4
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 4.1e-44 184.5 204 50.5
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 4.1e-44 184.5 239 43.9
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 1.2e-43 183.0 192 52.6
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 1.2e-43 183.0 175 53.7
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 3.4e-43 181.4 167 56.3
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 3.4e-43 181.4 193 50.8
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 5.9e-43 180.6 237 42.6
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 1.0e-42 179.9 204 49.0
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.3e-42 179.5 162 58.6
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 1.3e-42 179.5 191 50.8
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 1.3e-42 179.5 199 51.3
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 2.2e-42 178.7 201 48.3
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 2.2e-42 178.7 186 51.6
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.9e-42 178.3 214 48.1
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 2.9e-42 178.3 176 52.3
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 5.0e-42 177.6 204 46.1
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 1.1e-41 176.4 235 45.5
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 1.1e-41 176.4 175 52.0
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 1.1e-41 176.4 175 52.0
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 1.4e-41 176.0 156 56.4
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 1.4e-41 176.0 175 52.6
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 1.9e-41 175.6 175 53.1
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 3.2e-41 174.9 170 54.7
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 4.2e-41 174.5 216 45.8
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 7.2e-41 173.7 254 41.3
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 1.6e-40 172.6 212 45.8
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 2.1e-40 172.2 182 48.4
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 4.7e-40 171.0 152 59.2
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 6.1e-40 170.6 154 54.5
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 6.1e-40 170.6 211 47.4
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 7.9e-40 170.2 180 50.0
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 7.9e-40 170.2 214 43.5
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 1.0e-39 169.9 200 45.0
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.0e-39 169.9 181 48.1
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.8e-39 169.1 209 49.8
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.8e-39 169.1 181 48.1
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.0e-39 168.3 158 54.4
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.0e-39 168.3 158 54.4
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 3.0e-39 168.3 165 50.3
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 5.1e-39 167.5 184 50.5
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 5.1e-39 167.5 192 46.9
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 6.7e-39 167.2 168 52.4
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 6.7e-39 167.2 157 56.7
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 1.1e-38 166.4 181 46.4
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 1.5e-38 166.0 181 45.3
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 1.5e-38 166.0 201 47.3
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 2.0e-38 165.6 177 50.3
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 7.4e-38 163.7 176 51.7
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 7.4e-38 163.7 194 46.9
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 7.4e-38 163.7 251 42.6
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 9.7e-38 163.3 150 55.3
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 2.8e-37 161.8 181 47.0
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 4.8e-37 161.0 168 50.0
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 8.2e-37 160.2 154 53.2
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 1.1e-36 159.8 129 61.2
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 2.4e-36 158.7 137 56.2
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 3.1e-36 158.3 170 48.8
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 3.1e-36 158.3 132 56.8
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 3.1e-36 158.3 137 59.9
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 4.1e-36 157.9 206 45.6
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 5.3e-36 157.5 203 43.3
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 7.0e-36 157.1 120 63.3
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 1.2e-35 156.4 177 47.5
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 1.2e-35 156.4 199 44.7
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 1.2e-35 156.4 207 44.0
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 2.6e-35 155.2 277 37.9
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 3.5e-35 154.8 129 58.9
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 4.5e-35 154.5 129 58.1
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 4.5e-35 154.5 129 58.1
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 5.9e-35 154.1 176 43.8
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 7.7e-35 153.7 152 50.7
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 1.0e-34 153.3 147 53.7
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 1.0e-34 153.3 168 48.2
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 5.0e-34 151.0 174 46.6
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 8.5e-34 150.2 210 41.4
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 5.5e-33 147.5 161 44.1
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 9.4e-33 146.7 168 48.2
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 3.6e-32 144.8 170 42.9
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 8.0e-32 143.7 137 52.6
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 8.0e-32 143.7 164 49.4
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 8.0e-32 143.7 129 53.5
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.4e-31 142.9 170 38.8
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 1.8e-31 142.5 136 52.2
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 2.3e-31 142.1 178 41.0
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.0e-31 141.7 139 53.2
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 3.3e-30 138.3 127 55.1
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 5.7e-30 137.5 159 39.0
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 1.3e-29 136.3 173 36.4
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 1.3e-29 136.3 127 54.3
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.8e-29 134.4 212 42.0
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.4e-28 132.1 148 48.6
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 2.0e-27 129.0 129 53.5
Nn7g36096 Nelumbo nucifera HOM05D006008 ORTHO05D007334 3.5e-27 128.3 153 45.1
Glyma.04G060500 Glycine max HOM05D006008 ORTHO05D007334 1.0e-26 126.7 169 40.2
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.8e-26 124.8 180 42.8
Lalb_Chr23g0268191 Lupinus albus HOM05D006008 ORTHO05D007334 7.2e-25 120.6 151 44.4
HPP92_017173 Vanilla planifolia HOM05D006008 ORTHO05D007334 9.4e-25 120.2 147 42.2
CsaV3_4G036480 Cucumis sativus L. HOM05D006008 ORTHO05D007334 6.1e-24 117.5 151 38.4
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 1.4e-23 116.3 179 34.1
FAN20G1003 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.8e-23 115.9 156 35.9
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 1.2e-22 113.2 153 37.3
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 5.7e-22 110.9 137 43.1
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.7e-21 109.4 117 41.9
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 1.7e-21 109.4 113 54.9
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 8.3e-21 107.1 104 51.9
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.8e-20 105.9 124 47.6
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.1e-17 96.7 166 36.1
BcaNung03117 Brassica carinata HOM05D006008 ORTHO05D007334 2.4e-12 79.0 121 41.3
Lj5C111T12 Lonicera japonica HOM05D002453 ORTHO05D002107 2.6e-06 58.9 152 27.0


User provided reference genes

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