Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 2.5e-117 425.6 240 100.0
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.6e-100 369.8 241 87.1
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.4e-40 170.6 136 66.2
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 1.2e-39 167.5 150 63.3
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 2.7e-39 166.4 138 64.5
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 2.7e-39 166.4 139 66.2
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 3.5e-39 166.0 137 65.7
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 6.0e-39 165.2 137 67.2
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 7.9e-39 164.9 138 63.8
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 7.9e-39 164.9 138 67.4
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 7.9e-39 164.9 143 62.9
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.0e-38 164.5 136 67.6
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.8e-38 163.7 147 62.6
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 2.3e-38 163.3 146 62.3
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 5.1e-38 162.2 138 63.0
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 5.1e-38 162.2 140 60.7
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 8.7e-38 161.4 153 59.5
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.5e-37 160.6 185 53.0
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 2.5e-37 159.8 184 56.0
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 4.3e-37 159.1 151 58.9
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 7.4e-37 158.3 143 60.8
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.3e-36 157.5 254 45.3
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.3e-36 157.5 138 62.3
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.1e-36 156.8 257 45.9
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 2.8e-36 156.4 133 63.9
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 3.7e-36 156.0 145 60.0
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 4.8e-36 155.6 136 61.8
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 4.8e-36 155.6 139 62.6
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 4.8e-36 155.6 164 58.5
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 4.8e-36 155.6 142 64.1
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 6.2e-36 155.2 141 60.3
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 6.2e-36 155.2 141 60.3
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 1.1e-35 154.5 136 61.8
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.1e-35 154.5 102 77.5
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.4e-35 154.1 142 62.7
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.4e-35 154.1 136 61.0
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.8e-35 153.7 139 61.9
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.8e-35 153.7 139 59.0
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.4e-35 153.3 122 68.9
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 3.1e-35 152.9 151 57.0
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 5.3e-35 152.1 152 57.2
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 6.9e-35 151.8 143 61.5
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 9.0e-35 151.4 147 57.8
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 1.2e-34 151.0 142 60.6
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 2.0e-34 150.2 129 63.6
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 2.0e-34 150.2 233 45.1
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 2.6e-34 149.8 138 60.9
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 2.6e-34 149.8 214 45.8
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 3.4e-34 149.4 242 44.6
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 4.5e-34 149.1 118 64.4
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 5.8e-34 148.7 138 60.9
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 7.6e-34 148.3 230 44.8
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.0e-33 147.9 178 51.7
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.0e-33 147.9 170 50.6
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.2e-33 146.7 130 62.3
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 2.9e-33 146.4 105 68.6
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 2.9e-33 146.4 228 44.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 2.9e-33 146.4 138 58.7
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 4.9e-33 145.6 180 48.3
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 4.9e-33 145.6 145 57.9
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 4.9e-33 145.6 145 57.9
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.9e-33 145.6 145 57.9
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 6.5e-33 145.2 157 54.1
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 6.5e-33 145.2 138 58.7
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 8.4e-33 144.8 106 67.9
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.1e-32 144.4 145 57.2
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 1.1e-32 144.4 230 40.4
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 1.4e-32 144.1 147 55.8
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 1.4e-32 144.1 114 66.7
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.5e-32 143.3 145 58.6
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 2.5e-32 143.3 248 45.2
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 5.5e-32 142.1 146 56.8
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 5.5e-32 142.1 109 67.9
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 7.1e-32 141.7 130 61.5
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 7.1e-32 141.7 106 67.0
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.6e-31 140.6 149 57.0
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 7.9e-31 138.3 146 56.2
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 1.0e-30 137.9 173 49.1
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.0e-30 137.9 142 55.6
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 2.3e-30 136.7 146 55.5
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.3e-30 136.7 103 68.9
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.3e-30 136.7 187 46.0
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 3.9e-30 136.0 148 54.7
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 3.9e-30 136.0 150 55.3
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 3.9e-30 136.0 148 54.7
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 3.9e-30 136.0 148 54.7
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 3.9e-30 136.0 106 67.9
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 5.1e-30 135.6 150 55.3
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 1.9e-29 133.7 168 48.8
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 1.9e-29 133.7 100 70.0
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 3.3e-29 132.9 148 50.7
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.6e-28 130.6 108 64.8
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 1.6e-28 130.6 101 68.3
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.6e-28 130.6 102 70.6
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.6e-28 130.6 137 56.9
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 1.5e-26 124.0 96 66.7
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 1.5e-26 124.0 96 66.7
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 2.2e-25 120.2 132 51.5
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 2.2e-25 120.2 132 51.5
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 2.2e-25 120.2 132 51.5
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 5.0e-25 119.0 95 65.3
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 6.5e-25 118.6 96 65.6
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 2.5e-21 106.7 191 44.0
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.1e-19 101.3 109 46.8
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 1.4e-19 100.9 97 51.5
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.9e-16 90.5 103 46.6
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 5.5e-16 89.0 106 51.9
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 9.4e-16 88.2 131 41.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 6.1e-15 85.5 65 73.8
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.1e-13 81.3 54 68.5
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.3e-12 77.8 51 78.4
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.7e-12 77.4 88 50.0
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.7e-12 76.3 64 60.9
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.7e-12 76.3 64 60.9
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-11 74.7 82 48.8
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.4e-11 74.3 52 73.1
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.1e-11 73.2 58 60.3
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.1e-11 73.2 80 50.0
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.5e-10 70.9 110 49.1
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 6.5e-09 65.5 46 71.7
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 4.2e-08 62.8 78 42.3


User provided reference genes

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