Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.6e-208 729.2 356 100.0
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 3.4e-203 711.4 356 97.5
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.2e-139 500.4 378 67.2
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.3e-138 496.9 369 68.0
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.7e-138 496.5 375 66.9
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 2.9e-138 495.7 369 67.8
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 3.8e-138 495.4 395 64.1
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 4.2e-137 491.9 385 66.0
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 6.0e-136 488.0 388 65.2
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.5e-134 483.4 383 67.4
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 4.3e-134 481.9 376 65.7
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 5.6e-134 481.5 388 64.7
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 2.1e-133 479.6 374 66.3
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 2.1e-133 479.6 361 67.3
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 1.1e-132 477.2 382 65.4
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 4.0e-132 475.3 381 64.3
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 6.9e-132 474.6 375 65.3
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.5e-131 473.4 383 64.8
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 2.6e-131 472.6 412 61.2
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 7.6e-131 471.1 392 64.0
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 1.3e-130 470.3 399 62.7
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.3e-130 470.3 383 64.2
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.7e-130 469.9 391 62.4
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 3.8e-130 468.8 389 63.0
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 6.5e-130 468.0 402 62.4
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 5.5e-129 464.9 427 57.8
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 7.1e-129 464.5 361 66.2
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 9.3e-129 464.2 383 62.9
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 1.6e-128 463.4 391 62.4
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.1e-128 463.0 372 64.5
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.1e-128 463.0 409 61.4
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 6.0e-128 461.5 386 63.5
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.0e-127 460.7 392 63.0
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.3e-127 460.3 372 63.7
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.8e-127 459.9 398 61.8
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 8.7e-127 457.6 394 61.4
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 1.9e-126 456.4 416 58.9
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.3e-125 453.8 399 60.7
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 4.8e-125 451.8 399 60.9
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 4.8e-125 451.8 410 59.8
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.1e-124 450.7 364 63.7
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.8e-124 449.9 392 60.7
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 2.4e-124 449.5 394 60.7
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 5.3e-124 448.4 404 59.4
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 6.9e-124 448.0 392 60.2
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.5e-123 446.8 396 60.1
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.5e-123 446.8 407 58.5
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 2.6e-123 446.0 394 59.9
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.6e-123 446.0 415 57.8
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.0e-122 444.1 414 58.0
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 5.0e-122 441.8 406 58.9
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 8.4e-122 441.0 414 57.0
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 8.4e-122 441.0 392 59.9
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.4e-121 440.3 376 61.4
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 5.5e-121 438.3 358 61.7
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 7.2e-121 438.0 335 68.4
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 4.6e-120 435.3 394 59.1
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 2.3e-119 433.0 375 60.5
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 3.9e-119 432.2 411 56.4
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 8.7e-119 431.0 406 57.6
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.9e-118 429.9 376 60.4
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 3.3e-118 429.1 353 62.6
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 4.3e-118 428.7 394 58.1
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.3e-117 427.2 402 57.5
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.3e-117 427.2 348 64.4
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-117 426.8 424 54.2
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 4.8e-117 425.2 410 57.1
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 4.8e-117 425.2 410 57.1
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 4.8e-117 425.2 344 64.5
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 2.4e-116 422.9 412 57.3
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 2.4e-116 422.9 412 57.3
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-116 422.9 414 55.1
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-116 422.9 407 55.5
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-116 422.9 422 54.0
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 4.1e-116 422.2 353 62.3
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 1.3e-114 417.2 337 63.5
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.3e-114 417.2 338 64.2
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 2.9e-114 416.0 345 63.2
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 3.8e-114 415.6 326 65.3
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 5.0e-114 415.2 342 62.9
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 8.5e-114 414.5 403 55.8
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 8.5e-114 414.5 378 58.2
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.1e-113 414.1 412 55.6
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.4e-113 413.7 405 54.8
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 4.2e-113 412.1 406 56.2
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 2.1e-112 409.8 401 55.1
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 3.6e-112 409.1 335 63.6
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 4.6e-112 408.7 401 55.4
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 6.1e-112 408.3 392 55.6
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 6.1e-112 408.3 340 64.7
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.0e-111 407.5 467 49.9
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 2.3e-111 406.4 403 54.6
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 6.7e-111 404.8 401 54.9
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 6.7e-111 404.8 401 54.9
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 1.5e-110 403.7 317 66.6
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 1.5e-110 403.7 303 68.6
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 2.0e-110 403.3 367 59.4
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 2.0e-110 403.3 379 55.7
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 2.5e-110 402.9 405 54.8
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.5e-110 402.9 379 55.7
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 3.3e-110 402.5 396 55.8
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 9.7e-110 401.0 294 69.0
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 2.8e-109 399.4 347 60.2
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 6.3e-109 398.3 405 54.3
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-108 397.5 384 54.7
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.4e-108 397.1 389 53.2
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 4.1e-108 395.6 354 57.6
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 6.9e-108 394.8 415 53.0
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 5.5e-105 385.2 392 54.3
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 3.6e-104 382.5 333 62.5
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.3e-103 379.8 387 53.7
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 3.9e-103 379.0 387 53.7
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 8.8e-103 377.9 339 59.3
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.3e-101 371.7 402 52.0
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 3.2e-97 359.4 397 51.6
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.8e-92 343.6 383 49.9
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 7.7e-91 338.2 392 49.7
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 1.5e-89 334.0 342 51.5
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.9e-89 333.6 331 52.9
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 1.6e-88 330.5 376 50.5
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.4e-87 327.4 325 54.8
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 4.0e-87 325.9 326 52.8
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 6.8e-87 325.1 325 54.5
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 7.0e-84 315.1 294 55.8
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 7.7e-83 311.6 179 80.4
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 2.3e-79 300.1 363 48.5
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 6.8e-79 298.5 174 78.7
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 3.0e-66 256.5 274 54.4
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 8.6e-66 255.0 275 53.8
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 1.2e-62 244.6 127 86.6
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.6e-59 234.2 305 46.6
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 1.2e-54 218.0 254 52.4
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.1e-52 211.5 117 79.5
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.9e-52 210.7 109 87.2
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 5.6e-49 199.1 311 39.5
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.2e-46 191.4 113 73.5
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.1e-44 183.0 174 53.4
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 8.6e-42 175.3 96 86.5
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 3.6e-40 169.9 101 75.2
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 8.1e-40 168.7 145 63.4
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 1.4e-36 157.9 294 37.1
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 6.0e-35 152.5 141 56.0
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 3.2e-20 103.6 77 64.9
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.8e-16 89.7 78 52.6


User provided reference genes

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