Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3816 Ceratophyllum demersum HOM05D034644 ORTHO05D006350 0.0e+00 1551.2 754 100.0
CDE09G1128 Ceratophyllum demersum HOM05D034644 ORTHO05D130564 1.4e-171 607.4 486 68.1
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 1.7e-55 221.9 706 30.5
CDE09G0768 Ceratophyllum demersum HOM05D005457 ORTHO05D006350 6.5e-55 219.9 160 71.2
CDE09G1325 Ceratophyllum demersum HOM05D034644 ORTHO05D006350 1.2e-53 215.7 113 90.3
MBI14_g32923_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 2.0e-48 198.4 614 31.8
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 5.5e-46 190.3 654 30.4
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 2.6e-40 171.4 497 31.0
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 3.5e-40 171.0 584 30.1
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 1.7e-39 168.7 727 28.1
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 8.5e-39 166.4 519 32.0
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 1.3e-34 152.5 851 26.9
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 4.8e-34 150.6 659 29.6
TAR623G1322 Trochodendron aralioides HOM05D005457 ORTHO05D006350 8.2e-34 149.8 441 30.6
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 1.1e-33 149.4 419 32.0
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 5.3e-33 147.1 653 28.6
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 9.1e-33 146.4 739 29.0
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 1.6e-32 145.6 676 28.3
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 7.7e-32 143.3 648 28.7
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 7.7e-32 143.3 663 29.4
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 5.0e-31 140.6 781 27.3
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.5e-30 139.0 460 30.2
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.5e-30 139.0 460 30.2
AUR62020069 Chenopodium quinoa HOM05D005457 ORTHO05D006350 3.2e-30 137.9 517 30.6
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 7.2e-30 136.7 794 27.1
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 9.4e-30 136.3 637 28.4
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 9.4e-30 136.3 817 26.7
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 1.2e-29 136.0 623 30.0
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.6e-29 135.6 786 27.2
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 2.7e-29 134.8 654 26.6
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 4.7e-29 134.0 564 29.4
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 4.0e-28 131.0 650 27.1
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 8.8e-28 129.8 517 30.0
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 8.8e-28 129.8 749 27.0
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.2e-27 129.4 467 29.6
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 1.2e-27 129.4 418 29.9
Actinidia25123 Actinidia chinensis HOM05D005457 ORTHO05D006350 2.0e-27 128.6 721 26.1
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 3.4e-27 127.9 795 25.7
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 3.4e-27 127.9 813 26.8
RcHm_v2.0_Chr5g0067361 Rosa chinensis HOM05D005457 ORTHO05D006350 3.4e-27 127.9 331 34.4
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 4.4e-27 127.5 772 28.2
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 9.8e-27 126.3 880 25.6
MELO3C020581.2 Cucumis melo HOM05D005457 ORTHO05D006350 1.3e-26 125.9 605 27.4
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 1.7e-26 125.6 495 30.7
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 4.8e-26 124.0 648 26.5
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 5.4e-25 120.6 589 27.2
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 2.7e-24 118.2 334 32.3
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 3.5e-24 117.9 725 26.3
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 5.9e-24 117.1 535 27.9
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 1.0e-23 116.3 810 25.4
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-23 115.2 506 28.5
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-23 115.2 506 28.5
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 2.2e-23 115.2 506 28.5
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.9e-23 114.8 729 26.9
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 2.9e-23 114.8 791 26.7
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 5.0e-23 114.0 645 28.2
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 8.5e-23 113.2 466 31.3
Lj2A1073T53 Lonicera japonica HOM05D005457 ORTHO05D006350 1.1e-22 112.8 589 27.5
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 1.9e-22 112.1 354 33.1
Potri.009G040500 Populus trichocarpa HOM05D005457 ORTHO05D006350 1.9e-22 112.1 843 25.4
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 2.5e-22 111.7 753 25.1
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 2.5e-22 111.7 820 25.7
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 9.4e-22 109.8 789 25.6
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 2.1e-21 108.6 343 30.0
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 2.1e-21 108.6 404 29.0
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 3.6e-21 107.8 775 26.1
CSS0006949 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 1.0e-20 106.3 699 24.5
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 3.0e-20 104.8 230 36.1
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 8.8e-20 103.2 484 28.1
CSS0035455 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 2.6e-19 101.7 674 25.2
Eucgr.B02283 Eucalyptus grandis HOM05D005457 ORTHO05D006350 9.8e-19 99.8 86 57.0
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 3.7e-18 97.8 180 38.3
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 3.7e-18 97.8 768 25.8
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 4.9e-18 97.4 611 25.2
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 4.9e-18 97.4 191 38.7
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 6.3e-18 97.1 755 24.8
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 8.3e-18 96.7 802 24.8
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 1.1e-17 96.3 490 27.1
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 1.1e-17 96.3 179 38.5
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 1.8e-17 95.5 107 50.5
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 1.8e-17 95.5 135 41.5
Oeu017421.1 Olea europaea HOM05D005457 ORTHO05D006350 1.8e-17 95.5 144 41.0
Cpa.g.sc112.91 Carica papaya HOM05D005457 ORTHO05D006350 4.1e-17 94.4 87 55.2
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 7.0e-17 93.6 554 26.7
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 9.2e-17 93.2 742 25.7
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 2.0e-16 92.0 610 24.8
Os12g0155300 Oryza sativa ssp. japonica HOM05D005457 ORTHO05D006350 8.6e-15 86.7 326 28.8
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 1.9e-14 85.5 846 24.9
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 1.9e-14 85.5 506 26.5
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 1.2e-13 82.8 811 24.7
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 1.6e-13 82.4 793 25.3
unitig_27.g24810 Utricularia gibba HOM05D005457 ORTHO05D006350 5.2e-12 77.4 71 56.3
PGSC0003DMG400006701 Solanum tuberosum HOM05D005457 ORTHO05D006350 2.2e-10 72.0 767 24.5
Actinidia08557 Actinidia chinensis HOM05D005457 ORTHO05D006350 3.7e-10 71.2 443 26.4
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 1.8e-09 68.9 681 24.1
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 7.0e-09 67.0 154 35.1
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 1.6e-08 65.9 273 29.7
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 1.7e-07 62.4 790 23.5
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 3.3e-06 58.2 173 32.4


User provided reference genes

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