Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.0e-60 236.5 114 100.0
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 2.1e-58 228.8 114 95.6
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 5.4e-46 187.6 114 74.6
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 9.5e-43 176.8 119 73.1
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 9.5e-43 176.8 119 73.1
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 9.5e-43 176.8 108 73.1
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 1.2e-42 176.4 119 72.3
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 1.6e-42 176.0 115 69.6
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.6e-42 176.0 117 71.8
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.6e-42 176.0 118 72.0
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.1e-41 173.3 99 78.8
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 5.2e-41 171.0 122 67.2
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 5.2e-41 171.0 122 67.2
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 5.2e-41 171.0 116 71.6
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 6.8e-41 170.6 115 70.4
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 1.2e-40 169.9 96 80.2
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 1.5e-40 169.5 116 71.6
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 1.5e-40 169.5 116 70.7
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 2.6e-40 168.7 115 71.3
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 3.4e-40 168.3 119 68.1
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 4.4e-40 167.9 117 68.4
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 4.4e-40 167.9 116 69.8
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 5.8e-40 167.5 115 69.6
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 5.8e-40 167.5 95 78.9
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.7e-39 166.0 116 69.0
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 1.7e-39 166.0 108 68.5
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 2.9e-39 165.2 115 68.7
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 3.7e-39 164.9 99 75.8
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 3.7e-39 164.9 110 68.2
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 3.7e-39 164.9 115 68.7
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 3.7e-39 164.9 116 68.1
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 3.7e-39 164.9 116 68.1
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 8.3e-39 163.7 95 78.9
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 8.3e-39 163.7 116 67.2
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 1.1e-38 163.3 115 69.6
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.4e-38 162.9 116 67.2
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.4e-38 162.9 116 68.1
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.9e-38 162.5 116 67.2
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 2.4e-38 162.2 115 67.8
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 2.4e-38 162.2 117 65.0
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 4.1e-38 161.4 119 62.2
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 5.4e-38 161.0 96 76.0
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 5.4e-38 161.0 95 71.6
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 7.1e-38 160.6 114 66.7
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 9.2e-38 160.2 95 72.6
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 9.2e-38 160.2 107 68.2
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 9.2e-38 160.2 115 66.1
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 9.2e-38 160.2 115 67.0
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.2e-37 159.8 96 75.0
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 1.6e-37 159.5 97 74.2
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 2.7e-37 158.7 96 75.0
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.7e-37 158.7 96 75.0
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.7e-37 158.7 96 75.0
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 2.7e-37 158.7 96 75.0
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 2.7e-37 158.7 119 68.1
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 3.5e-37 158.3 111 68.5
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 3.5e-37 158.3 123 68.3
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 4.6e-37 157.9 121 60.3
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 4.6e-37 157.9 98 73.5
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 4.6e-37 157.9 96 74.0
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 7.8e-37 157.1 115 65.2
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 7.8e-37 157.1 112 67.9
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 1.0e-36 156.8 118 65.3
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 1.3e-36 156.4 95 73.7
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 1.3e-36 156.4 116 68.1
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.7e-36 156.0 96 74.0
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 3.0e-36 155.2 112 61.6
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 3.9e-36 154.8 111 64.9
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 3.9e-36 154.8 100 71.0
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 5.1e-36 154.5 116 68.1
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 2.5e-35 152.1 114 60.5
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 2.5e-35 152.1 118 59.3
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 4.3e-35 151.4 114 60.5
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 4.3e-35 151.4 114 60.5
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 7.3e-35 150.6 114 60.5
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 7.3e-35 150.6 114 60.5
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 7.3e-35 150.6 114 60.5
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 7.3e-35 150.6 114 61.4
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 1.6e-34 149.4 114 65.8
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 2.1e-34 149.1 108 67.6
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 4.7e-34 147.9 115 59.1
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 8.1e-34 147.1 82 79.3
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.1e-33 146.7 104 68.3
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.8e-33 146.0 118 61.0
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 3.1e-33 145.2 115 58.3
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 5.2e-33 144.4 129 55.0
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 7.6e-32 140.6 83 75.9
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 4.6e-29 131.3 94 60.6
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 4.3e-27 124.8 123 56.9
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 9.6e-27 123.6 64 79.7
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 4.0e-25 118.2 93 53.8
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 8.9e-25 117.1 100 53.0
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 7.6e-24 114.0 96 58.3
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.7e-23 112.8 80 68.8
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 2.2e-23 112.5 94 55.3
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 3.9e-20 101.7 64 71.9
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 3.6e-18 95.1 60 70.0
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 4.0e-17 91.7 87 48.3
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 3.0e-12 75.5 91 37.4
MCO04G361 Micromonas commoda HOM05D007622 ORTHO05D009409 7.6e-08 60.8 77 39.0
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 2.2e-07 59.3 53 52.8


User provided reference genes

Program Settings