Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3795 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 5.7e-33 143.7 73 100.0
Nn4g23335 Nelumbo nucifera HOM05D003853 ORTHO05D004171 5.6e-12 73.9 54 68.5
Thecc.02G335500 Theobroma cacao HOM05D003853 ORTHO05D004171 2.0e-09 65.5 63 54.0
Hma1.2p1_0354F.1_g133590 Hydrangea macrophylla HOM05D003853 ORTHO05D004171 4.4e-09 64.3 64 56.2
CDE02G1866 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 7.5e-09 63.5 47 70.2
Dinv16707 Davidia involucrata HOM05D003853 ORTHO05D004171 1.7e-08 62.4 65 53.8
TWI75G0276 Tripterygium wilfordii HOM05D003853 ORTHO05D004171 8.3e-08 60.1 55 58.2
Thecc.02G335600 Theobroma cacao HOM05D003853 ORTHO05D004171 1.1e-07 59.7 47 66.0
Lj6P782T102 Lonicera japonica HOM05D003853 ORTHO05D004171 1.9e-07 58.9 68 50.0
PGR102G0417 Punica granatum HOM05D003853 ORTHO05D004171 1.9e-07 58.9 66 45.5
PGR102G3239 Punica granatum HOM05D003853 ORTHO05D004171 1.9e-07 58.9 66 45.5
Duzib251G0928 Durio zibethinus HOM05D003853 ORTHO05D004171 2.4e-07 58.5 53 56.6
Oeu048150.1 Olea europaea HOM05D003853 ORTHO05D004171 2.4e-07 58.5 52 55.8
Manes.01G030100 Manihot esculenta HOM05D003853 ORTHO05D004171 3.2e-07 58.2 67 50.7
TAR622G0811 Trochodendron aralioides HOM05D003853 ORTHO05D004171 3.2e-07 58.2 60 51.7
Cpa.g.sc1.97 Carica papaya HOM05D003853 ORTHO05D004171 4.1e-07 57.8 53 56.6
Duzib251G0287 Durio zibethinus HOM05D003853 ORTHO05D004171 7.0e-07 57.0 49 59.2
Ah.03g139160 Amaranthus hybridus HOM05D003853 ORTHO05D004171 1.2e-06 56.2 47 57.4
CiPaw.05G127700 Carya illinoinensis HOM05D003853 ORTHO05D004171 1.6e-06 55.8 71 47.9
Manes.01G030000 Manihot esculenta HOM05D003853 ORTHO05D004171 1.6e-06 55.8 64 48.4
Gohir.D02G128200 Gossypium hirsutum HOM05D003853 ORTHO05D004171 2.0e-06 55.5 49 57.1
Gorai.005G143900 Gossypium raimondii HOM05D003853 ORTHO05D004171 2.0e-06 55.5 49 57.1
ATR0111G024 Amborella trichopoda HOM05D003853 ORTHO05D004171 2.7e-06 55.1 53 56.6
Ciclev10033000m.g Citrus clementina HOM05D003853 ORTHO05D004171 3.5e-06 54.7 58 51.7
Haze_11978 Corylus avellana HOM05D003853 ORTHO05D004171 4.6e-06 54.3 59 44.1
Nitab4.5_0000014g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 4.6e-06 54.3 53 54.7
Nitab4.5_0002806g0050 Nicotiana tabacum HOM05D003853 ORTHO05D004171 4.6e-06 54.3 53 54.7
Gohir.A03G103000 Gossypium hirsutum HOM05D003853 ORTHO05D004171 6.0e-06 53.9 43 62.8
CiPaw.05G127600 Carya illinoinensis HOM05D003853 ORTHO05D004171 7.8e-06 53.5 71 45.1
AUR62003133 Chenopodium quinoa HOM05D003853 ORTHO05D004171 7.8e-06 53.5 51 47.1


User provided reference genes

Program Settings