Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3774 Ceratophyllum demersum HOM05D005863 ORTHO05D003355 1.1e-215 753.1 397 100.0
TAR629G1344 Trochodendron aralioides HOM05D005863 ORTHO05D003355 5.0e-14 83.2 59 62.7
GSVIVG01000596001 Vitis vinifera HOM05D005863 ORTHO05D003355 2.5e-13 80.9 59 62.7
Aqoxy3G01339 Aquilegia oxysepala HOM05D005863 ORTHO05D003355 1.6e-12 78.2 381 26.0
Ciclev10030561m.g Citrus clementina HOM05D005863 ORTHO05D003355 1.8e-11 74.7 58 58.6
Haze_12305 Corylus avellana HOM05D005863 ORTHO05D003355 1.8e-11 74.7 63 57.1
Dinv14763 Davidia involucrata HOM05D005863 ORTHO05D003355 2.3e-11 74.3 58 56.9
Gorai.005G174200 Gossypium raimondii HOM05D005863 ORTHO05D003355 2.3e-11 74.3 96 41.7
CiPaw.11G070600 Carya illinoinensis HOM05D005863 ORTHO05D003355 5.2e-11 73.2 59 57.6
Rhsim12G0037600 Rhododendron simsii HOM05D005863 ORTHO05D003355 5.2e-11 73.2 58 58.6
Gohir.A03G131400 Gossypium hirsutum HOM05D005863 ORTHO05D003355 8.8e-11 72.4 59 54.2
Migut.K00651 Erythranthe guttata HOM05D005863 ORTHO05D003355 1.1e-10 72.0 154 31.8
Duzib251G0242 Durio zibethinus HOM05D005863 ORTHO05D003355 1.5e-10 71.6 59 54.2
arahy.Tifrunner.gnm1.ann1.R3FSDD Arachis hypogaea HOM05D015529 ORTHO05D015409 2.0e-10 71.2 144 26.4
MELO3C010709.2 Cucumis melo HOM05D005863 ORTHO05D003355 2.0e-10 71.2 57 57.9
MBI14_g22553_MAGBIO Magnolia biondii HOM05D005863 ORTHO05D003355 2.6e-10 70.9 56 51.8
Manes.12G018600 Manihot esculenta HOM05D005863 ORTHO05D003355 3.3e-10 70.5 346 27.7
Lsat_1_v5_gn_8_150460 Lactuca sativa HOM05D005863 ORTHO05D003355 4.4e-10 70.1 337 28.2
Nn1g07525 Nelumbo nucifera HOM05D005863 ORTHO05D003355 4.4e-10 70.1 79 43.0
COL.COLO4_23547 Corchorus olitorius HOM05D005863 ORTHO05D003355 5.7e-10 69.7 59 52.5
Sc14g0008880 Simmondsia chinensis HOM05D005863 ORTHO05D003355 5.7e-10 69.7 77 45.5
Actinidia30696 Actinidia chinensis HOM05D005863 ORTHO05D003355 9.7e-10 68.9 57 57.9
ClCG08G017500 Citrullus lanatus HOM05D005863 ORTHO05D003355 1.3e-09 68.6 373 23.3
TWI36G0003 Tripterygium wilfordii HOM05D005863 ORTHO05D003355 1.3e-09 68.6 204 28.4
Manes.13G019100 Manihot esculenta HOM05D005863 ORTHO05D003355 1.7e-09 68.2 267 28.8
Nn4g22491 Nelumbo nucifera HOM05D005863 ORTHO05D003355 1.7e-09 68.2 58 56.9
Psat5g094240 Pisum sativum HOM05D013281 ORTHO05D003355 2.2e-09 67.8 58 50.0
TPR.G14234 Trifolium pratense HOM05D013281 ORTHO05D003355 2.2e-09 67.8 149 28.2
Lalb_Chr23g0277781 Lupinus albus HOM05D013281 ORTHO05D003355 2.8e-09 67.4 178 29.2
Potri.010G052200 Populus trichocarpa HOM05D005863 ORTHO05D003355 2.8e-09 67.4 58 53.4
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 3.7e-09 67.0 55 50.9
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 4.8e-09 66.6 56 51.8
Lalb_Chr11g0075601 Lupinus albus HOM05D005863 ORTHO05D003355 4.8e-09 66.6 56 51.8
SalBow2G2700 Salvia bowleyana HOM05D005863 ORTHO05D003355 6.3e-09 66.2 58 48.3
Dinv10342 Davidia involucrata HOM05D005863 ORTHO05D003355 8.2e-09 65.9 86 36.0
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 1.1e-08 65.5 90 37.8
Glyma.18G011700 Glycine max HOM05D013281 ORTHO05D003355 1.8e-08 64.7 57 45.6
Nitab4.5_0011762g0010 Nicotiana tabacum HOM05D012928 ORTHO05D003355 1.8e-08 64.7 63 42.9
Sed0020016 Sechium edule HOM05D005863 ORTHO05D003355 2.4e-08 64.3 57 52.6
THA.LOC104807749 Tarenaya hassleriana HOM05D008497 ORTHO05D003355 2.4e-08 64.3 59 54.2
vmacro01106 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 2.4e-08 64.3 57 52.6
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 2.4e-08 64.3 79 38.0
Glyma.11G245500 Glycine max HOM05D013281 ORTHO05D003355 3.1e-08 63.9 57 47.4
Rhsim10G0199400 Rhododendron simsii HOM05D005863 ORTHO05D003355 3.1e-08 63.9 143 31.5
Atru.chr2.3697 Acer truncatum HOM05D005863 ORTHO05D003355 4.1e-08 63.5 79 36.7
arahy.Tifrunner.gnm1.ann1.1NC23U Arachis hypogaea HOM05D015529 ORTHO05D015409 4.1e-08 63.5 238 23.5
CsaV3_2G025110 Cucumis sativus L. HOM05D005863 ORTHO05D003355 4.1e-08 63.5 361 24.4
Duzib268G1590 Durio zibethinus HOM05D005863 ORTHO05D003355 4.1e-08 63.5 276 26.8
Gohir.D13G135600 Gossypium hirsutum HOM05D005863 ORTHO05D003355 4.1e-08 63.5 52 53.8
Peaxi162Scf00128g00645 Petunia axillaris HOM05D012928 ORTHO05D003355 4.1e-08 63.5 67 44.8
MSTRG.544 Avicennia marina HOM05D005863 ORTHO05D003355 5.3e-08 63.2 64 51.6
Cpa.g.sc369.6 Carica papaya HOM05D005863 ORTHO05D003355 5.3e-08 63.2 397 23.2
ATR0824G200 Amborella trichopoda HOM05D005863 ORTHO05D003355 7.0e-08 62.8 330 23.0
arahy.Tifrunner.gnm1.ann1.5I91Y5 Arachis hypogaea HOM05D015529 ORTHO05D015409 7.0e-08 62.8 239 23.4
Gorai.013G152000 Gossypium raimondii HOM05D005863 ORTHO05D003355 9.1e-08 62.4 50 54.0
PSO339G3984 Papaver somniferum HOM05D005863 ORTHO05D003355 1.6e-07 61.6 63 47.6
PGR031G1574 Punica granatum HOM05D005863 ORTHO05D003355 1.6e-07 61.6 58 51.7
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 1.6e-07 61.6 50 54.0
Thecc.02G268600 Theobroma cacao HOM05D005863 ORTHO05D003355 2.6e-07 60.8 346 24.0
Atru.chr11.2201 Acer truncatum HOM05D005863 ORTHO05D003355 3.5e-07 60.5 57 50.9
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 3.5e-07 60.5 50 52.0
Gohir.A13G132200 Gossypium hirsutum HOM05D005863 ORTHO05D003355 4.5e-07 60.1 50 52.0
Medtr3g086220 Medicago truncatula HOM05D013281 ORTHO05D003355 4.5e-07 60.1 56 46.4
Solyc05g014130.3 Solanum lycopersicum HOM05D012928 ORTHO05D003355 4.5e-07 60.1 62 40.3
Sopen05g009140 Solanum pennellii HOM05D012928 ORTHO05D003355 4.5e-07 60.1 62 40.3
ATR0751G078 Amborella trichopoda HOM05D005863 ORTHO05D003355 5.9e-07 59.7 60 43.3
HanXRQChr01g0023571 Helianthus annuus HOM05D005863 ORTHO05D003355 5.9e-07 59.7 243 25.9
QL03p055923 Quercus lobata HOM05D005863 ORTHO05D003355 5.9e-07 59.7 379 26.4
Sed0006554 Sechium edule HOM05D005863 ORTHO05D003355 7.7e-07 59.3 319 24.8
Sabra10G0018100 Salix brachista HOM05D005863 ORTHO05D003355 1.0e-06 58.9 386 23.8
HanXRQChr08g0208041 Helianthus annuus HOM05D005863 ORTHO05D003355 1.3e-06 58.5 310 24.5
Rhsim10G0199200 Rhododendron simsii HOM05D005863 ORTHO05D003355 1.3e-06 58.5 67 40.3
HPP92_003025 Vanilla planifolia HOM05D048574 ORTHO05D003355 1.3e-06 58.5 89 34.8
Lsat_1_v5_gn_7_114301 Lactuca sativa HOM05D005863 ORTHO05D003355 2.2e-06 57.8 50 46.0
Oeu038657.1 Olea europaea HOM05D012928 ORTHO05D003355 2.2e-06 57.8 54 51.9
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 2.9e-06 57.4 50 48.0
CARHR215860 Cardamine hirsuta HOM05D008497 ORTHO05D003355 2.9e-06 57.4 56 42.9
DCAR_024069 Daucus carota HOM05D005863 ORTHO05D003355 2.9e-06 57.4 324 23.8
PSO339G2613 Papaver somniferum HOM05D005863 ORTHO05D003355 3.8e-06 57.0 51 51.0
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 3.8e-06 57.0 55 50.9
Sc16g0008130 Simmondsia chinensis HOM05D005863 ORTHO05D003355 3.8e-06 57.0 119 31.1
HPP92_027528 Vanilla planifolia HOM05D005863 ORTHO05D003355 3.8e-06 57.0 56 46.4
Ciclev10008896m.g Citrus clementina HOM05D005863 ORTHO05D003355 5.0e-06 56.6 74 36.5
PGR102G1092 Punica granatum HOM05D005863 ORTHO05D003355 5.0e-06 56.6 58 46.6
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 6.5e-06 56.2 201 27.4
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 6.5e-06 56.2 90 31.1
PSO384G2180 Papaver somniferum HOM05D005863 ORTHO05D003355 8.5e-06 55.8 60 45.0


User provided reference genes

Program Settings