Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3689 Ceratophyllum demersum HOM05D000149 ORTHO05D000076 1.2e-52 209.5 100 100.0
CDE02G1647 Ceratophyllum demersum HOM05D000149 ORTHO05D000076 2.4e-21 105.5 170 41.8
CDE04G1373 Ceratophyllum demersum HOM05D001256 ORTHO05D000076 4.0e-21 104.8 150 45.3
GSVIVG01025514001 Vitis vinifera HOM05D000149 ORTHO05D000076 9.0e-13 77.0 164 35.4
MBI19_g24064_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 1.5e-12 76.3 161 34.8
Atru.chr3.2038 Acer truncatum HOM05D000149 ORTHO05D000076 2.6e-12 75.5 151 35.1
Manes.15G111600 Manihot esculenta HOM05D000149 ORTHO05D000076 3.4e-12 75.1 165 35.8
Cfa009522 Carpinus fangiana HOM05D000149 ORTHO05D000076 5.8e-12 74.3 166 34.9
Nn2g15919 Nelumbo nucifera HOM05D000149 ORTHO05D000076 5.8e-12 74.3 161 32.9
TWI60G1465 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 7.6e-12 73.9 165 35.8
PSO384G0767 Papaver somniferum HOM05D000149 ORTHO05D000076 1.0e-11 73.6 164 33.5
TWI32G0997 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 2.2e-11 72.4 165 35.2
QL01p007741 Quercus lobata HOM05D000149 ORTHO05D000076 3.8e-11 71.6 163 33.7
Ciclev10017993m.g Citrus clementina HOM05D000149 ORTHO05D000076 6.5e-11 70.9 161 32.9
PSO339G2212 Papaver somniferum HOM05D000149 ORTHO05D000076 1.6e-09 66.2 65 50.8
PGR119G2156 Punica granatum HOM05D000149 ORTHO05D000076 2.1e-09 65.9 65 50.8
Haze_06866 Corylus avellana HOM05D000149 ORTHO05D000076 6.0e-09 64.3 50 64.0
COL.COLO4_35059 Corchorus olitorius HOM05D000149 ORTHO05D000076 1.8e-08 62.8 166 31.3
Eucgr.J01721 Eucalyptus grandis HOM05D000149 ORTHO05D000076 2.3e-08 62.4 67 49.3
Aa31LG3G12210 Aethionema arabicum HOM05D000149 ORTHO05D009857 3.0e-08 62.0 62 50.0
AT5G56300 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 3.0e-08 62.0 62 48.4
THA.LOC104811708 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 3.0e-08 62.0 152 28.3
AL8G31930 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 5.1e-08 61.2 62 48.4
Carub.0008s1662 Capsella rubella HOM05D000149 ORTHO05D000076 5.1e-08 61.2 62 48.4
Sp6g18150 Schrenkiella parvula HOM05D000149 ORTHO05D000076 5.1e-08 61.2 67 44.8
AL7G26530 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 6.7e-08 60.8 66 43.9
CARHR269700 Cardamine hirsuta HOM05D000149 ORTHO05D000076 6.7e-08 60.8 62 48.4
BcaC01g06415 Brassica carinata HOM05D000149 ORTHO05D000076 8.7e-08 60.5 62 46.8
BolC3t14018H Brassica oleracea HOM05D000149 ORTHO05D000076 8.7e-08 60.5 62 46.8
C03p15870 Brassica napus HOM05D000149 ORTHO05D000076 1.1e-07 60.1 62 46.8
Thhalv10013757m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 1.1e-07 60.1 62 48.4
HPP92_007513 Vanilla planifolia HOM05D000149 ORTHO05D000076 1.1e-07 60.1 65 46.2
C08p09880 Brassica napus HOM05D008960 ORTHO05D019923 1.5e-07 59.7 71 42.3
Sp7g24330 Schrenkiella parvula HOM05D000149 ORTHO05D000076 1.9e-07 59.3 58 48.3
A03p13570 Brassica napus HOM05D000149 ORTHO05D000076 3.3e-07 58.5 62 45.2
BraA03t10662Z Brassica rapa HOM05D000149 ORTHO05D000076 3.3e-07 58.5 62 45.2
Carub.0007s1453 Capsella rubella HOM05D000149 ORTHO05D000076 3.3e-07 58.5 58 46.6
CARHR233980 Cardamine hirsuta HOM05D000149 ORTHO05D000076 3.3e-07 58.5 58 46.6
AT4G26420 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 4.3e-07 58.2 58 44.8
BcaB01g04391 Brassica carinata HOM05D000149 ORTHO05D000076 4.3e-07 58.2 62 45.2
BcaNung05646 Brassica carinata HOM05D000149 ORTHO05D000076 4.3e-07 58.2 62 45.2
A08p20780 Brassica napus HOM05D000149 ORTHO05D000076 5.7e-07 57.8 58 46.6
C09p47750 Brassica napus HOM05D000149 ORTHO05D000076 5.7e-07 57.8 60 45.0
BcaNung02421 Brassica carinata HOM05D000149 ORTHO05D000076 9.6e-07 57.0 58 46.6
ATR0068G012 Amborella trichopoda HOM05D000149 ORTHO05D000076 1.3e-06 56.6 62 46.8
BcaC09g50701 Brassica carinata HOM05D000149 ORTHO05D000076 1.3e-06 56.6 58 44.8
A01p17640 Brassica napus HOM05D000149 ORTHO05D000076 1.3e-06 56.6 58 44.8
C01p22280 Brassica napus HOM05D000149 ORTHO05D000076 1.3e-06 56.6 58 44.8
BolC1t02158H Brassica oleracea HOM05D000149 ORTHO05D000076 1.3e-06 56.6 58 44.8
BraA01t01718Z Brassica rapa HOM05D000149 ORTHO05D000076 1.3e-06 56.6 58 44.8
BraA08t34032Z Brassica rapa HOM05D000149 ORTHO05D000076 1.6e-06 56.2 58 46.6
BcaC07g38234 Brassica carinata HOM05D000149 ORTHO05D000076 3.7e-06 55.1 58 44.8
BcaC07g38238 Brassica carinata HOM05D000149 ORTHO05D000076 3.7e-06 55.1 51 49.0
BcaNung06322 Brassica carinata HOM05D000149 ORTHO05D000076 3.7e-06 55.1 58 44.8
C08p09850 Brassica napus HOM05D000149 ORTHO05D000076 3.7e-06 55.1 58 44.8
BolC8t48661H Brassica oleracea HOM05D000149 ORTHO05D000076 3.7e-06 55.1 58 44.8
Mapoly0054s0007 Marchantia polymorpha HOM05D000149 ORTHO05D000076 3.7e-06 55.1 51 51.0


User provided reference genes

Program Settings