Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3673 Ceratophyllum demersum HOM05D000117 ORTHO05D000070 5.6e-92 340.9 169 100.0
CDE09G0512 Ceratophyllum demersum HOM05D000117 ORTHO05D000070 9.1e-58 227.3 136 83.8
TAR365G0720 Trochodendron aralioides HOM05D000117 ORTHO05D000070 5.9e-33 144.8 143 58.0
HPP92_001173 Vanilla planifolia HOM05D000117 ORTHO05D000070 1.0e-29 134.0 144 54.2
TAR362G0856 Trochodendron aralioides HOM05D000117 ORTHO05D000070 2.3e-29 132.9 142 54.9
Nn3g21969 Nelumbo nucifera HOM05D000117 ORTHO05D000070 3.1e-29 132.5 144 54.2
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.2e-28 130.6 126 54.8
GSVIVG01028242001 Vitis vinifera HOM05D000117 ORTHO05D000070 4.4e-28 128.6 144 57.6
Potri.014G111700 Populus trichocarpa HOM05D000117 ORTHO05D000070 3.5e-25 119.0 139 52.5
Nn4g25298 Nelumbo nucifera HOM05D000117 ORTHO05D000070 7.8e-25 117.9 143 52.4
Sabra14G0082100 Salix brachista HOM05D000117 ORTHO05D000070 3.9e-24 115.5 138 51.4
Manes.01G235500 Manihot esculenta HOM05D000117 ORTHO05D000070 1.6e-22 110.2 139 51.8
CiPaw.07G126100 Carya illinoinensis HOM05D000117 ORTHO05D000070 3.1e-21 105.9 143 52.4
FAN12G2665 Fragaria x ananassa HOM05D000117 ORTHO05D000070 3.1e-21 105.9 152 48.7
FAN07G0894 Fragaria x ananassa HOM05D000117 ORTHO05D000070 5.2e-21 105.1 152 48.0
FvH4_4g21780 Fragaria vesca HOM05D000117 ORTHO05D000070 6.8e-21 104.8 152 48.7
FAN17G2717 Fragaria x ananassa HOM05D000117 ORTHO05D000070 6.8e-21 104.8 152 48.0
Haze_05154 Corylus avellana HOM05D000117 ORTHO05D000070 8.9e-21 104.4 145 51.7
Sabra02G0148000 Salix brachista HOM05D000117 ORTHO05D000070 1.2e-20 104.0 138 47.8
Glyma.17G042800 Glycine max HOM05D000117 ORTHO05D000070 2.0e-20 103.2 120 49.2
MD13G1137000 Malus domestica HOM05D000117 ORTHO05D000070 2.6e-20 102.8 129 48.1
Potri.002G186400 Populus trichocarpa HOM05D000117 ORTHO05D000070 3.4e-20 102.4 138 47.1
Prupe.1G208300 Prunus persica HOM05D000117 ORTHO05D000070 3.4e-20 102.4 166 44.0
RcHm_v2.0_Chr4g0428011 Rosa chinensis HOM05D000117 ORTHO05D000070 3.4e-20 102.4 146 45.2
Manes.05G008300 Manihot esculenta HOM05D000117 ORTHO05D000070 5.8e-20 101.7 138 46.4
MBI19_g04829_MAGBIO Magnolia biondii HOM05D000117 ORTHO05D000070 7.5e-20 101.3 141 44.7
MBI19_g34705_MAGBIO Magnolia biondii HOM05D000117 ORTHO05D000070 7.5e-20 101.3 141 44.7
Sabra02G0148400 Salix brachista HOM05D000117 ORTHO05D000070 7.5e-20 101.3 144 46.5
Thecc.01G326100 Theobroma cacao HOM05D000117 ORTHO05D000070 7.5e-20 101.3 150 47.3
Cfa004918 Carpinus fangiana HOM05D000117 ORTHO05D000070 1.3e-19 100.5 143 51.0
Glyma.13G117100 Glycine max HOM05D000117 ORTHO05D000070 2.2e-19 99.8 120 48.3
Atru.chr5.853 Acer truncatum HOM05D000117 ORTHO05D000070 2.9e-19 99.4 142 49.3
CDE05G3088 Ceratophyllum demersum HOM05D000117 ORTHO05D000070 3.7e-19 99.0 134 45.5
Duzib133G0819 Durio zibethinus HOM05D000117 ORTHO05D000070 3.7e-19 99.0 147 46.9
MD16G1132500 Malus domestica HOM05D000117 ORTHO05D000070 3.7e-19 99.0 162 43.8
Phvul.003G124600 Phaseolus vulgaris HOM05D000117 ORTHO05D000070 3.7e-19 99.0 120 47.5
VMungo1215G1795 Vigna mungo HOM05D000117 ORTHO05D000070 3.7e-19 99.0 120 47.5
Atru.chr4.3189 Acer truncatum HOM05D000117 ORTHO05D000070 6.4e-19 98.2 149 46.3
Medtr4g124300 Medicago truncatula HOM05D000117 ORTHO05D000070 6.4e-19 98.2 140 50.0
CDE11G0713 Ceratophyllum demersum HOM05D000117 ORTHO05D000070 1.1e-18 97.4 134 44.8
Hund12267 Selenicereus undatus HOM05D000117 ORTHO05D000070 2.4e-18 96.3 121 47.9
AUR62023669 Chenopodium quinoa HOM05D000117 ORTHO05D000070 3.2e-18 95.9 138 46.4
ATR0796G031 Amborella trichopoda HOM05D000117 ORTHO05D000070 4.1e-18 95.5 138 45.7
Lalb_Chr13g0299071 Lupinus albus HOM05D000117 ORTHO05D000070 4.1e-18 95.5 126 46.0
Duzib138G1727 Durio zibethinus HOM05D000117 ORTHO05D000070 7.0e-18 94.7 146 45.9
Glyma.02G007300 Glycine max HOM05D000117 ORTHO05D000070 9.2e-18 94.4 148 45.3
Lj2g0017783 Lotus japonicus HOM05D000117 ORTHO05D000070 9.2e-18 94.4 126 47.6
Lj4g0002430 Lotus japonicus HOM05D000117 ORTHO05D000070 9.2e-18 94.4 126 47.6
PSO761G0718 Papaver somniferum HOM05D000117 ORTHO05D000070 9.2e-18 94.4 81 55.6
Aqoxy2G02441 Aquilegia oxysepala HOM05D000117 ORTHO05D000070 1.2e-17 94.0 107 47.7
PSO210G5845 Papaver somniferum HOM05D000117 ORTHO05D000070 1.2e-17 94.0 81 55.6
Lalb_Chr12g0200481 Lupinus albus HOM05D000117 ORTHO05D000070 1.6e-17 93.6 132 45.5
Lalb_Chr07g0181541 Lupinus albus HOM05D000117 ORTHO05D000070 3.5e-17 92.4 126 43.7
Phvul.007G208800 Phaseolus vulgaris HOM05D000117 ORTHO05D000070 4.6e-17 92.0 146 43.8
COL.COLO4_23121 Corchorus olitorius HOM05D000117 ORTHO05D000070 6.0e-17 91.7 116 49.1
Glyma.10G138500 Glycine max HOM05D000117 ORTHO05D000070 7.8e-17 91.3 147 43.5
QL06p014745 Quercus lobata HOM05D000117 ORTHO05D000070 1.3e-16 90.5 179 39.7
QL12p035012 Quercus lobata HOM05D000117 ORTHO05D000070 2.3e-16 89.7 114 48.2
GSVIVG01017711001 Vitis vinifera HOM05D000117 ORTHO05D000070 5.1e-16 88.6 140 42.9
arahy.Tifrunner.gnm1.ann1.IPD4BK Arachis hypogaea HOM05D000117 ORTHO05D000070 8.6e-16 87.8 128 47.7
Lalb_Chr02g0147171 Lupinus albus HOM05D000117 ORTHO05D000070 1.5e-15 87.0 141 42.6
Lalb_Chr21g0309861 Lupinus albus HOM05D000117 ORTHO05D000070 2.5e-15 86.3 140 42.9
PGR004G2247 Punica granatum HOM05D000117 ORTHO05D000070 2.5e-15 86.3 84 50.0
Zm00001eb129570 Zea mays HOM05D000117 ORTHO05D000070 2.5e-15 86.3 148 40.5
Zm00001eb332360 Zea mays HOM05D000117 ORTHO05D000070 2.5e-15 86.3 128 43.8
PGR142G1412 Punica granatum HOM05D000117 ORTHO05D000070 4.3e-15 85.5 146 43.8
TWI23G0820 Tripterygium wilfordii HOM05D000117 ORTHO05D000070 4.3e-15 85.5 149 45.0
arahy.Tifrunner.gnm1.ann1.K6ZRIQ Arachis hypogaea HOM05D000117 ORTHO05D000070 7.3e-15 84.7 123 45.5
Gohir.D08G143200 Gossypium hirsutum HOM05D000117 ORTHO05D000070 9.5e-15 84.3 142 43.7
Gorai.004G147500 Gossypium raimondii HOM05D000117 ORTHO05D000070 9.5e-15 84.3 142 43.7
Gohir.A08G121800 Gossypium hirsutum HOM05D000117 ORTHO05D000070 1.2e-14 84.0 142 43.7
Lj5g0006480 Lotus japonicus HOM05D000117 ORTHO05D000070 1.2e-14 84.0 130 43.8
CARHR092910 Cardamine hirsuta HOM05D000117 ORTHO05D000070 2.8e-14 82.8 144 41.0
BcaC05g28771 Brassica carinata HOM05D000117 ORTHO05D000070 8.1e-14 81.3 136 39.0
Ah.07g203470 Amaranthus hybridus HOM05D000117 ORTHO05D000070 1.1e-13 80.9 90 50.0
CDE01G0612 Ceratophyllum demersum HOM05D000117 ORTHO05D000070 1.1e-13 80.9 64 60.9
Gohir.D07G136000 Gossypium hirsutum HOM05D000117 ORTHO05D000070 1.1e-13 80.9 147 43.5
Gorai.001G148100 Gossypium raimondii HOM05D000117 ORTHO05D000070 1.1e-13 80.9 147 43.5
QL06p014752 Quercus lobata HOM05D000117 ORTHO05D000070 1.4e-13 80.5 179 38.0
arahy.Tifrunner.gnm1.ann1.AIW4ZZ Arachis hypogaea HOM05D000117 ORTHO05D000070 1.8e-13 80.1 110 47.3
Lj1g0011851 Lotus japonicus HOM05D000117 ORTHO05D000070 1.8e-13 80.1 146 43.8
Sp3g15730 Schrenkiella parvula HOM05D000117 ORTHO05D000070 1.8e-13 80.1 133 41.4
arahy.Tifrunner.gnm1.ann1.F8XE83 Arachis hypogaea HOM05D000117 ORTHO05D000070 2.3e-13 79.7 147 41.5
A05p32250 Brassica napus HOM05D000117 ORTHO05D000070 2.3e-13 79.7 91 44.0
BraA05t22054Z Brassica rapa HOM05D000117 ORTHO05D000070 2.3e-13 79.7 91 44.0
A03p40260 Brassica napus HOM05D000117 ORTHO05D000070 3.1e-13 79.3 145 40.7
BolC3t17176H Brassica oleracea HOM05D000117 ORTHO05D000070 3.1e-13 79.3 145 40.7
BraA03t13179Z Brassica rapa HOM05D000117 ORTHO05D000070 3.1e-13 79.3 145 40.7
Thhalv10021921m.g Eutrema salsugineum HOM05D000117 ORTHO05D000070 3.1e-13 79.3 133 38.3
BcaC01g03750 Brassica carinata HOM05D000117 ORTHO05D000070 4.0e-13 79.0 145 40.7
C05p48780 Brassica napus HOM05D000117 ORTHO05D000070 5.2e-13 78.6 125 36.8
BolC5t33615H Brassica oleracea HOM05D000117 ORTHO05D000070 5.2e-13 78.6 125 36.8
Cfa015756 Carpinus fangiana HOM05D000117 ORTHO05D000070 6.8e-13 78.2 139 40.3
Haze_00748 Corylus avellana HOM05D000117 ORTHO05D000070 6.8e-13 78.2 116 43.1
Gohir.A07G131700 Gossypium hirsutum HOM05D000117 ORTHO05D000070 6.8e-13 78.2 147 42.9
C03p48960 Brassica napus HOM05D000117 ORTHO05D000070 1.2e-12 77.4 164 37.8
BcaB06g25833 Brassica carinata HOM05D000117 ORTHO05D000070 1.5e-12 77.0 91 42.9
Gohir.A12G119300 Gossypium hirsutum HOM05D000117 ORTHO05D000070 2.6e-12 76.3 116 45.7
Gohir.D12G123033 Gossypium hirsutum HOM05D000117 ORTHO05D000070 2.6e-12 76.3 116 45.7
Prupe.3G001800 Prunus persica HOM05D000117 ORTHO05D000070 3.4e-12 75.9 171 39.8
Aa31LG8G4470 Aethionema arabicum HOM05D000117 ORTHO05D000070 4.4e-12 75.5 129 38.0
Eucgr.H04141 Eucalyptus grandis HOM05D000117 ORTHO05D000070 7.5e-12 74.7 136 39.0
BcaB04g18953 Brassica carinata HOM05D000117 ORTHO05D000070 9.9e-12 74.3 106 43.4
Ciclev10023961m.g Citrus clementina HOM05D000117 ORTHO05D000070 1.7e-11 73.6 141 42.6
Gohir.A11G105200 Gossypium hirsutum HOM05D000117 ORTHO05D000070 1.7e-11 73.6 140 42.1
Gorai.008G134000 Gossypium raimondii HOM05D000117 ORTHO05D000070 2.2e-11 73.2 115 45.2
Cpa.g.sc57.25 Carica papaya HOM05D000117 ORTHO05D000070 2.9e-11 72.8 125 44.8
AUR62002523 Chenopodium quinoa HOM05D000117 ORTHO05D000070 3.7e-11 72.4 76 56.6
Gohir.D11G110100 Gossypium hirsutum HOM05D000117 ORTHO05D000070 3.7e-11 72.4 140 42.1
Gorai.007G117700 Gossypium raimondii HOM05D000117 ORTHO05D000070 3.7e-11 72.4 140 42.1
Ciclev10006600m.g Citrus clementina HOM05D000117 ORTHO05D000070 4.9e-11 72.0 138 37.0
HPP92_016968 Vanilla planifolia HOM05D000117 ORTHO05D000070 4.9e-11 72.0 143 36.4
AT3G17600 Arabidopsis thaliana HOM05D000117 ORTHO05D000070 6.4e-11 71.6 140 37.9
VMungo1383G0132 Vigna mungo HOM05D000117 ORTHO05D000070 6.4e-11 71.6 111 41.4
Ca_09249_v3 Cicer arietinum L. HOM05D000117 ORTHO05D000070 8.3e-11 71.2 139 38.1
Thhalv10001719m.g Eutrema salsugineum HOM05D000117 ORTHO05D000070 8.3e-11 71.2 167 36.5
HPP92_017033 Vanilla planifolia HOM05D000117 ORTHO05D000070 1.1e-10 70.9 144 36.1
AL3G30670 Arabidopsis lyrata HOM05D000117 ORTHO05D000070 1.9e-10 70.1 140 37.1
Medtr1g085750 Medicago truncatula HOM05D000117 ORTHO05D000070 1.9e-10 70.1 129 41.1
arahy.Tifrunner.gnm1.ann1.TW93UF Arachis hypogaea HOM05D000117 ORTHO05D000070 2.4e-10 69.7 60 56.7
Eucgr.K00561 Eucalyptus grandis HOM05D000117 ORTHO05D000070 2.4e-10 69.7 61 54.1
Carub.0004s2972 Capsella rubella HOM05D000117 ORTHO05D000070 3.2e-10 69.3 149 34.9
Glyma.03G224800 Glycine max HOM05D000117 ORTHO05D000070 3.2e-10 69.3 62 56.5
Glyma.19G221900 Glycine max HOM05D000117 ORTHO05D000070 3.2e-10 69.3 62 56.5
Phvul.001G218700 Phaseolus vulgaris HOM05D000117 ORTHO05D000070 4.1e-10 68.9 110 40.9
AT2G46990 Arabidopsis thaliana HOM05D000117 ORTHO05D000070 7.1e-10 68.2 150 36.7
Carub.0003s1731 Capsella rubella HOM05D000117 ORTHO05D000070 1.2e-09 67.4 140 35.7
TPR.G3039 Trifolium pratense HOM05D000117 ORTHO05D000070 1.2e-09 67.4 118 40.7
CARHR172440 Cardamine hirsuta HOM05D000117 ORTHO05D000070 1.6e-09 67.0 141 38.3
A04p00720 Brassica napus HOM05D000117 ORTHO05D000070 2.1e-09 66.6 144 37.5
BraA04t15792Z Brassica rapa HOM05D000117 ORTHO05D000070 2.1e-09 66.6 144 37.5
BcaC01g03749 Brassica carinata HOM05D000117 ORTHO05D000070 2.7e-09 66.2 105 40.0
CARHR142360 Cardamine hirsuta HOM05D000117 ORTHO05D000070 2.7e-09 66.2 143 38.5
Psat6g158720 Pisum sativum HOM05D000117 ORTHO05D000070 3.5e-09 65.9 59 55.9
AL4G46470 Arabidopsis lyrata HOM05D000117 ORTHO05D000070 4.6e-09 65.5 140 37.1
BcaB02g08123 Brassica carinata HOM05D000117 ORTHO05D000070 4.6e-09 65.5 144 37.5
BcaC02g10281 Brassica carinata HOM05D000117 ORTHO05D000070 4.6e-09 65.5 144 37.5
C04p30820 Brassica napus HOM05D000117 ORTHO05D000070 4.6e-09 65.5 144 37.5
BolC4t24602H Brassica oleracea HOM05D000117 ORTHO05D000070 4.6e-09 65.5 144 37.5
THA.LOC104802115 Tarenaya hassleriana HOM05D000117 ORTHO05D000070 4.6e-09 65.5 143 36.4
Psat3g016840 Pisum sativum HOM05D000117 ORTHO05D000070 6.0e-09 65.1 62 51.6
RcHm_v2.0_Chr4g0428791 Rosa chinensis HOM05D000117 ORTHO05D000070 7.8e-09 64.7 54 61.1
BcaB06g29466 Brassica carinata HOM05D000117 ORTHO05D000070 1.0e-08 64.3 141 36.2
A04p34750 Brassica napus HOM05D000117 ORTHO05D000070 1.0e-08 64.3 146 36.3
C04p72530 Brassica napus HOM05D000117 ORTHO05D000070 1.0e-08 64.3 145 36.6
BolC4t28741H Brassica oleracea HOM05D000117 ORTHO05D000070 1.0e-08 64.3 145 36.6
BraA04t18931Z Brassica rapa HOM05D000117 ORTHO05D000070 1.0e-08 64.3 146 36.3
Thhalv10006424m.g Eutrema salsugineum HOM05D000117 ORTHO05D000070 1.0e-08 64.3 142 37.3
Lalb_Chr18g0046371 Lupinus albus HOM05D000117 ORTHO05D000070 1.0e-08 64.3 143 35.0
BcaC07g40703 Brassica carinata HOM05D000117 ORTHO05D000070 1.3e-08 63.9 161 34.8
C08p37060 Brassica napus HOM05D000117 ORTHO05D000070 1.3e-08 63.9 161 34.8
BolC8t51284H Brassica oleracea HOM05D000117 ORTHO05D000070 1.3e-08 63.9 161 34.8
AL5G44860 Arabidopsis lyrata HOM05D000117 ORTHO05D000070 1.7e-08 63.5 147 36.1
AT3G62100 Arabidopsis thaliana HOM05D000117 ORTHO05D000070 1.7e-08 63.5 143 37.1
arahy.Tifrunner.gnm1.ann1.LI3NQ1 Arachis hypogaea HOM05D000117 ORTHO05D000070 1.7e-08 63.5 60 53.3
A09p54200 Brassica napus HOM05D000117 ORTHO05D000070 1.7e-08 63.5 161 32.9
BraA09t40832Z Brassica rapa HOM05D000117 ORTHO05D000070 1.7e-08 63.5 161 32.9
Cfa015755 Carpinus fangiana HOM05D000117 ORTHO05D000070 5.1e-08 62.0 110 35.5
Medtr7g110790 Medicago truncatula HOM05D000117 ORTHO05D000070 5.1e-08 62.0 139 37.4
BcaB02g07353 Brassica carinata HOM05D000117 ORTHO05D000070 6.6e-08 61.6 147 36.1
CANSAT25G1324 Cannabis sativa HOM05D000117 ORTHO05D000070 6.6e-08 61.6 135 33.3
TPR.G8381 Trifolium pratense HOM05D000117 ORTHO05D000070 6.6e-08 61.6 139 36.7
Zm00001eb271530 Zea mays HOM05D000117 ORTHO05D000070 6.6e-08 61.6 103 35.9
BcaC08g45182 Brassica carinata HOM05D000117 ORTHO05D000070 8.6e-08 61.2 146 37.0
C06p28080 Brassica napus HOM05D000117 ORTHO05D000070 8.6e-08 61.2 146 37.0
BolC6t37971H Brassica oleracea HOM05D000117 ORTHO05D000070 8.6e-08 61.2 146 37.0
Os01g0286900 Oryza sativa ssp. japonica HOM05D000117 ORTHO05D000070 8.6e-08 61.2 81 46.9
Os02g0723400 Oryza sativa ssp. japonica HOM05D000117 ORTHO05D000070 8.6e-08 61.2 162 35.2
THA.LOC104817427 Tarenaya hassleriana HOM05D000117 ORTHO05D000070 8.6e-08 61.2 142 35.9
A07p25840 Brassica napus HOM05D000117 ORTHO05D000070 1.1e-07 60.8 145 35.9
BraA07t30228Z Brassica rapa HOM05D000117 ORTHO05D000070 1.1e-07 60.8 145 35.9
Carub.0005s2885 Capsella rubella HOM05D000117 ORTHO05D000070 1.1e-07 60.8 150 36.7
Sp5g01270 Schrenkiella parvula HOM05D000117 ORTHO05D000070 1.5e-07 60.5 143 36.4
Aa31LG1G28360 Aethionema arabicum HOM05D000117 ORTHO05D000070 2.5e-07 59.7 146 34.2
arahy.Tifrunner.gnm1.ann1.QH3XYS Arachis hypogaea HOM05D000117 ORTHO05D000070 3.3e-07 59.3 62 53.2
arahy.Tifrunner.gnm1.ann1.WISN8Q Arachis hypogaea HOM05D000117 ORTHO05D000070 3.3e-07 59.3 62 53.2
Lj6P704T35 Lonicera japonica HOM05D000117 ORTHO05D000070 3.3e-07 59.3 61 50.8
MD00G1016500 Malus domestica HOM05D000117 ORTHO05D000070 4.3e-07 58.9 63 52.4
Sp4g28990 Schrenkiella parvula HOM05D000117 ORTHO05D000070 4.3e-07 58.9 141 34.8
BolC1t04634H Brassica oleracea HOM05D000117 ORTHO05D000070 1.2e-06 57.4 87 39.1
Oeu000439.1 Olea europaea HOM05D000117 ORTHO05D000070 1.2e-06 57.4 70 38.6
MELO3C006477.2 Cucumis melo HOM05D000117 ORTHO05D000070 2.1e-06 56.6 139 30.2
AUR62005881 Chenopodium quinoa HOM05D000117 ORTHO05D000070 2.8e-06 56.2 104 29.8
DCAR_018241 Daucus carota HOM05D000117 ORTHO05D000070 3.6e-06 55.8 164 34.1
AUR62032874 Chenopodium quinoa HOM05D000117 ORTHO05D000070 4.7e-06 55.5 104 29.8
Glyma.13G361100 Glycine max HOM05D000117 ORTHO05D000070 4.7e-06 55.5 91 29.7
SalBow2G0705 Salvia bowleyana HOM05D000117 ORTHO05D000070 4.7e-06 55.5 70 37.1
Glyma.15G012800 Glycine max HOM05D000117 ORTHO05D000070 6.2e-06 55.1 90 28.9


User provided reference genes

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