Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3605 Ceratophyllum demersum HOM05D001944 ORTHO05D002405 0.0e+00 1739.2 895 100.0
TAR636G3431 Trochodendron aralioides HOM05D001944 ORTHO05D002405 8.5e-46 189.9 1079 24.6
TAR369G0775 Trochodendron aralioides HOM05D001944 ORTHO05D002405 4.1e-40 171.0 853 27.0
Potri.005G010133 Populus trichocarpa HOM05D001944 ORTHO05D002405 2.0e-31 142.1 959 24.2
CSS0012038 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 8.6e-30 136.7 884 25.0
Sabra05G0007500 Salix brachista HOM05D001944 ORTHO05D002405 1.4e-27 129.4 1004 23.3
Potri.004G212700 Populus trichocarpa HOM05D001944 ORTHO05D002405 4.4e-26 124.4 1049 24.0
PSO063G0478 Papaver somniferum HOM05D001944 ORTHO05D002405 4.9e-25 120.9 975 24.7
Potri.013G006000 Populus trichocarpa HOM05D001944 ORTHO05D002405 4.9e-25 120.9 1006 24.2
Aqoxy1G01204 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 1.8e-24 119.0 278 32.0
Manes.03G122401 Manihot esculenta HOM05D001944 ORTHO05D002405 2.0e-23 115.5 1174 21.9
Migut.N02586 Erythranthe guttata HOM05D001944 ORTHO05D002405 5.9e-23 114.0 827 23.3
Dinv01067 Davidia involucrata HOM05D001944 ORTHO05D002405 1.0e-22 113.2 1009 24.1
Nn2g13727 Nelumbo nucifera HOM05D001944 ORTHO05D002405 1.3e-22 112.8 985 23.5
MSTRG.17786 Avicennia marina HOM05D001944 ORTHO05D002405 1.7e-22 112.5 926 23.8
Nn2g11517 Nelumbo nucifera HOM05D001944 ORTHO05D002405 8.6e-22 110.2 1104 23.2
vmacro03215 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 8.6e-22 110.2 895 22.8
Actinidia07154 Actinidia chinensis HOM05D001944 ORTHO05D002405 1.5e-21 109.4 961 23.5
PSO339G1466 Papaver somniferum HOM05D001944 ORTHO05D002405 1.9e-21 109.0 970 23.9
Hund01491 Selenicereus undatus HOM05D001944 ORTHO05D002405 1.9e-21 109.0 849 22.6
Actinidia20443 Actinidia chinensis HOM05D001944 ORTHO05D014293 1.6e-20 105.9 266 32.3
Actinidia03719 Actinidia chinensis HOM05D001944 ORTHO05D002405 4.7e-20 104.4 974 22.9
Sc21g0003900 Simmondsia chinensis HOM05D001944 ORTHO05D002405 4.7e-20 104.4 948 22.7
Dinv32718 Davidia involucrata HOM05D001944 ORTHO05D002405 8.0e-20 103.6 293 29.7
QL93p2013_0009 Quercus lobata HOM05D001944 ORTHO05D002405 1.8e-19 102.4 809 23.9
Oeu013469.1 Olea europaea HOM05D001944 ORTHO05D002405 3.1e-19 101.7 852 23.4
TAR633G2605 Trochodendron aralioides HOM05D001944 ORTHO05D002405 6.8e-19 100.5 1002 23.1
QL07p044103 Quercus lobata HOM05D001944 ORTHO05D002405 1.2e-18 99.8 813 23.7
Oeu056301.1 Olea europaea HOM05D001944 ORTHO05D002405 2.6e-18 98.6 244 30.3
Ca_01395_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 9.8e-18 96.7 986 22.0
EL10Ac9g22555 Beta vulgaris HOM05D001944 ORTHO05D002405 1.9e-16 92.4 940 22.4
Cpa.g.sc311.2 Carica papaya HOM05D001944 ORTHO05D002405 2.7e-15 88.6 1022 22.1
Peaxi162Scf00167g00092 Petunia axillaris HOM05D001944 ORTHO05D002405 6.0e-15 87.4 730 23.3
MSTRG.12332 Avicennia marina HOM05D001944 ORTHO05D002405 1.0e-14 86.7 248 29.4
Nitab4.5_0000181g0180 Nicotiana tabacum HOM05D001944 ORTHO05D002405 1.3e-14 86.3 382 26.4
ATR0048G049 Amborella trichopoda HOM05D001944 ORTHO05D002405 2.3e-14 85.5 291 28.5
Solyc11g069610.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 3.0e-14 85.1 930 22.4
Aqoxy7G00183 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 8.6e-14 83.6 805 22.4
GSVIVG01025215001 Vitis vinifera HOM05D001944 ORTHO05D002405 1.5e-13 82.8 390 25.9
MD11G1139900 Malus domestica HOM05D001944 ORTHO05D002405 1.9e-13 82.4 246 30.1
Sopen11g028320 Solanum pennellii HOM05D001944 ORTHO05D002405 2.5e-13 82.0 934 22.6
Nitab4.5_0006619g0010 Nicotiana tabacum HOM05D001944 ORTHO05D002405 3.3e-13 81.6 315 27.6
Rhsim13G0096400 Rhododendron simsii HOM05D001944 ORTHO05D002405 4.3e-13 81.3 782 22.3
SHI21823 Sapria himalayana HOM05D001944 ORTHO05D002405 5.6e-13 80.9 240 29.6
arahy.Tifrunner.gnm1.ann1.02PMC1 Arachis hypogaea HOM05D001944 ORTHO05D002405 9.5e-13 80.1 369 27.6
arahy.Tifrunner.gnm1.ann1.D4VV12 Arachis hypogaea HOM05D001944 ORTHO05D002405 1.2e-12 79.7 384 28.4
Gorai.004G230500 Gossypium raimondii HOM05D001944 ORTHO05D002405 2.8e-12 78.6 531 25.2
Lj3g0013525 Lotus japonicus HOM05D001944 ORTHO05D002405 2.8e-12 78.6 298 29.2
Haze_23780 Corylus avellana HOM05D001944 ORTHO05D002405 6.2e-12 77.4 969 22.7
Gohir.A05G105000 Gossypium hirsutum HOM05D001944 ORTHO05D002405 6.2e-12 77.4 248 27.8
SGA_v2.0_scaffold127G34027 Striga asiatica HOM05D001944 ORTHO05D002405 6.2e-12 77.4 339 25.4
Lj2C1021G5 Lonicera japonica HOM05D001944 ORTHO05D002405 1.1e-11 76.6 1083 22.2
Gohir.D05G104800 Gossypium hirsutum HOM05D001944 ORTHO05D002405 5.2e-11 74.3 248 27.4
Medtr2g095030 Medicago truncatula HOM05D001944 ORTHO05D002405 5.2e-11 74.3 443 26.4
Thecc.09G343900 Theobroma cacao HOM05D001944 ORTHO05D002405 5.2e-11 74.3 259 27.8
Gorai.009G108800 Gossypium raimondii HOM05D001944 ORTHO05D002405 6.8e-11 73.9 248 27.4
Duzib168G0647 Durio zibethinus HOM05D001944 ORTHO05D002405 1.5e-10 72.8 247 27.5
Phvul.005G133500 Phaseolus vulgaris HOM05D001944 ORTHO05D002405 1.5e-10 72.8 891 21.5
Dinv37298 Davidia involucrata HOM05D001944 ORTHO05D002405 2.6e-10 72.0 278 28.1
MD11G1140000 Malus domestica HOM05D001944 ORTHO05D002405 3.4e-10 71.6 225 28.9
Cc01_g10870 Coffea canephora HOM05D001944 ORTHO05D002405 4.4e-10 71.2 464 26.5
FAN25G3826 Fragaria x ananassa HOM05D001944 ORTHO05D002405 4.4e-10 71.2 324 26.2
CAN.G631.45 Capsicum annuum HOM05D000550 ORTHO05D009781 7.5e-10 70.5 929 21.6
TAR623G0602 Trochodendron aralioides HOM05D001944 ORTHO05D002405 7.5e-10 70.5 159 34.6
MD03G1121600 Malus domestica HOM05D001944 ORTHO05D002405 1.3e-09 69.7 556 22.8
Os06g0102900 Oryza sativa ssp. japonica HOM05D001944 ORTHO05D011318 2.9e-09 68.6 555 26.1
QL01p026770 Quercus lobata HOM05D001944 ORTHO05D002405 3.7e-09 68.2 556 24.6
ClCG03G002980 Citrullus lanatus HOM05D001944 ORTHO05D002405 4.9e-09 67.8 426 26.8
CANSAT54G1673 Cannabis sativa HOM05D001944 ORTHO05D002405 6.4e-09 67.4 714 21.1
Gohir.A08G199401 Gossypium hirsutum HOM05D001944 ORTHO05D002405 6.4e-09 67.4 496 25.6
Peaxi162Scf00948g00114 Petunia axillaris HOM05D001944 ORTHO05D002405 6.4e-09 67.4 948 22.2
TWI79G1706 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 6.4e-09 67.4 267 26.2
Cfa011296 Carpinus fangiana HOM05D001944 ORTHO05D002405 8.3e-09 67.0 1074 21.4
Lj1A201T35 Lonicera japonica HOM05D001944 ORTHO05D011318 8.3e-09 67.0 215 26.5
MELO3C004905.2 Cucumis melo HOM05D001944 ORTHO05D002405 1.4e-08 66.2 1127 20.8
VMungo1080G1631 Vigna mungo HOM05D001944 ORTHO05D002405 1.4e-08 66.2 881 22.2
Atru.chr8.1406 Acer truncatum HOM05D001944 ORTHO05D002405 2.4e-08 65.5 304 25.7
CiPaw.14G085200 Carya illinoinensis HOM05D001944 ORTHO05D002405 3.2e-08 65.1 1083 20.3
COL.COLO4_18305 Corchorus olitorius HOM05D001944 ORTHO05D002405 4.1e-08 64.7 527 26.6
Migut.D02244 Erythranthe guttata HOM05D001944 ORTHO05D002405 4.1e-08 64.7 119 37.0
Thecc.05G062600 Theobroma cacao HOM05D001944 ORTHO05D002405 4.1e-08 64.7 379 25.9
Ca_01379_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 5.4e-08 64.3 1108 20.8
Dinv32719 Davidia involucrata HOM05D001944 ORTHO05D002405 5.4e-08 64.3 194 32.5
Oeu056302.1 Olea europaea HOM05D001944 ORTHO05D002405 7.1e-08 63.9 119 35.3
CSS0009803 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D017225 9.2e-08 63.5 81 39.5
arahy.Tifrunner.gnm1.ann1.ST0ZZW Arachis hypogaea HOM05D001944 ORTHO05D011318 1.2e-07 63.2 547 23.0
AUR62029227 Chenopodium quinoa HOM05D001944 ORTHO05D002405 1.2e-07 63.2 360 26.4
Os02g0110700 Oryza sativa ssp. japonica HOM05D041147 ORTHO05D037118 1.2e-07 63.2 210 30.5
Prupe.6G104600 Prunus persica HOM05D001944 ORTHO05D002405 1.6e-07 62.8 50 56.0
CSS0041121 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D017225 2.1e-07 62.4 81 38.3
PSO732G0712 Papaver somniferum HOM05D022664 ORTHO05D002405 2.1e-07 62.4 137 32.8
HPP92_003456 Vanilla planifolia HOM05D041147 ORTHO05D017225 2.1e-07 62.4 118 33.9
Solyc06g010240.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 2.7e-07 62.0 482 22.2
CAN.G171.6 Capsicum annuum HOM05D001944 ORTHO05D002405 3.5e-07 61.6 562 22.2
Ciclev10027663m.g Citrus clementina HOM05D001944 ORTHO05D002405 3.5e-07 61.6 596 22.7
PSO384G1822 Papaver somniferum HOM05D001944 ORTHO05D002405 3.5e-07 61.6 108 34.3
Sed0004333 Sechium edule HOM05D001944 ORTHO05D002405 4.6e-07 61.2 256 28.5
Sopen06g005090 Solanum pennellii HOM05D001944 ORTHO05D002405 6.0e-07 60.8 537 22.5
TPR.G11481 Trifolium pratense HOM05D001944 ORTHO05D002405 6.0e-07 60.8 400 24.8
Nitab4.5_0000602g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 1.0e-06 60.1 281 22.8
PGSC0003DMG400019409 Solanum tuberosum HOM05D001944 ORTHO05D002405 1.0e-06 60.1 331 24.8
SGA_v2.0_scaffold116G32253 Striga asiatica HOM05D001944 ORTHO05D002405 1.3e-06 59.7 251 25.1
HPP92_003459 Vanilla planifolia HOM05D041147 ORTHO05D017225 1.3e-06 59.7 87 39.1
FAN21G2742 Fragaria x ananassa HOM05D001944 ORTHO05D002405 1.7e-06 59.3 1094 20.7
Nitab4.5_0006532g0030 Nicotiana tabacum HOM05D001944 ORTHO05D002405 1.7e-06 59.3 225 23.6
SalBow3G3117 Salvia bowleyana HOM05D001944 ORTHO05D002405 1.7e-06 59.3 185 27.6
vmacro14422 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 1.7e-06 59.3 264 25.8
Hma1.2p1_0307F.1_g119910 Hydrangea macrophylla HOM05D001944 ORTHO05D002405 2.3e-06 58.9 228 28.1
Nitab4.5_0006619g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 2.3e-06 58.9 412 23.8
Sc20g0005300 Simmondsia chinensis HOM05D001944 ORTHO05D002405 2.3e-06 58.9 212 26.9
CSS0007832 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 3.0e-06 58.5 97 38.1
FvH4_3g31740 Fragaria vesca HOM05D001944 ORTHO05D002405 3.0e-06 58.5 1093 20.8
Lsat_1_v5_gn_1_53241 Lactuca sativa HOM05D001944 ORTHO05D002405 3.0e-06 58.5 162 32.1
AUR62022774 Chenopodium quinoa HOM05D001944 ORTHO05D002405 3.9e-06 58.2 853 21.2
PSO339G2779 Papaver somniferum HOM05D001944 ORTHO05D002405 3.9e-06 58.2 107 34.6
Prupe.6G104700 Prunus persica HOM05D001944 ORTHO05D002405 3.9e-06 58.2 241 25.7
Actinidia20444 Actinidia chinensis HOM05D001944 ORTHO05D002405 5.1e-06 57.8 204 30.4
TWI31G0996 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 5.1e-06 57.8 501 23.2
Lj1A201T36 Lonicera japonica HOM05D001944 ORTHO05D002405 8.6e-06 57.0 264 27.3
RcHm_v2.0_Chr5g0058411 Rosa chinensis HOM05D001944 ORTHO05D002405 8.6e-06 57.0 196 26.5


User provided reference genes

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