Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 3.4e-61 238.0 113 100.0
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.1e-35 153.3 78 94.9
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 6.1e-34 147.5 107 70.1
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.4e-33 146.4 114 65.8
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 7.5e-32 140.6 112 62.5
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 9.8e-32 140.2 108 68.5
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 9.8e-32 140.2 108 63.9
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 2.2e-31 139.0 108 63.9
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 4.9e-31 137.9 110 64.5
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 6.3e-31 137.5 109 67.0
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 6.3e-31 137.5 111 64.9
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 8.3e-31 137.1 108 65.7
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 1.1e-30 136.7 101 68.3
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.8e-30 136.0 108 65.7
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 1.8e-30 136.0 108 65.7
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 2.4e-30 135.6 98 66.3
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 3.1e-30 135.2 106 65.1
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 3.1e-30 135.2 99 68.7
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 4.1e-30 134.8 97 66.0
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 5.4e-30 134.4 111 61.3
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 7.0e-30 134.0 108 61.1
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 7.0e-30 134.0 104 63.5
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 7.0e-30 134.0 111 60.4
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 7.0e-30 134.0 105 67.6
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 9.2e-30 133.7 109 64.2
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 9.2e-30 133.7 110 61.8
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 1.6e-29 132.9 82 75.6
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 2.0e-29 132.5 108 63.0
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 2.0e-29 132.5 110 62.7
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 2.7e-29 132.1 112 61.6
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 4.5e-29 131.3 97 66.0
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 5.9e-29 131.0 99 62.6
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 5.9e-29 131.0 105 61.0
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 5.9e-29 131.0 98 66.3
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 5.9e-29 131.0 103 63.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 7.8e-29 130.6 73 79.5
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 7.8e-29 130.6 110 59.1
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 7.8e-29 130.6 99 65.7
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 7.8e-29 130.6 112 61.6
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.0e-28 130.2 107 57.9
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.3e-28 129.8 95 65.3
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 1.3e-28 129.8 106 65.1
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.3e-28 129.8 101 61.4
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 1.3e-28 129.8 82 74.4
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.7e-28 129.4 104 60.6
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 2.3e-28 129.0 102 63.7
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 3.8e-28 128.3 116 60.3
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 5.0e-28 127.9 100 64.0
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 6.6e-28 127.5 121 58.7
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 6.6e-28 127.5 107 58.9
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 8.6e-28 127.1 107 58.9
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 8.6e-28 127.1 94 63.8
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.1e-27 126.7 87 69.0
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.1e-27 126.7 100 60.0
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.9e-27 125.9 98 64.3
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.9e-27 125.9 108 58.3
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 5.6e-27 124.4 82 68.3
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 7.3e-27 124.0 110 65.5
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 9.5e-27 123.6 69 75.4
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.6e-26 122.9 111 57.7
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 2.1e-26 122.5 96 68.8
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 3.6e-26 121.7 104 60.6
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 4.7e-26 121.3 100 63.0
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 4.7e-26 121.3 112 56.2
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 8.0e-26 120.6 103 61.2
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.0e-25 120.2 68 77.9
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 1.0e-25 120.2 98 62.2
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 1.0e-25 120.2 102 60.8
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.0e-25 120.2 69 75.4
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 3.0e-25 118.6 92 66.3
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 6.8e-25 117.5 108 59.3
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 8.9e-25 117.1 102 58.8
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 8.9e-25 117.1 68 79.4
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 2.0e-24 115.9 71 73.2
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 2.0e-24 115.9 71 73.2
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 2.6e-24 115.5 68 76.5
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 2.6e-24 115.5 68 76.5
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 2.6e-24 115.5 68 76.5
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 2.6e-24 115.5 68 76.5
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 4.4e-24 114.8 114 52.6
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.4e-24 114.8 149 47.0
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 4.4e-24 114.8 145 46.2
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 5.7e-24 114.4 68 75.0
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 5.7e-24 114.4 68 75.0
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 5.7e-24 114.4 68 75.0
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 3.7e-23 111.7 68 75.0
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 3.2e-22 108.6 102 57.8
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.0e-21 105.9 88 70.5
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.5e-21 105.1 99 53.5
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 7.8e-21 104.0 94 53.2
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.3e-20 103.2 106 52.8
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.3e-20 103.2 131 43.5
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 6.6e-20 100.9 65 63.1
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 8.6e-20 100.5 65 66.2
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.1e-19 100.1 92 58.7
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 3.3e-19 98.6 91 50.5
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 4.0e-17 91.7 123 46.3
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.5e-16 89.7 104 48.1
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 1.7e-15 86.3 143 41.3
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.9e-15 85.5 73 49.3
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.4e-14 83.2 122 49.2
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 4.6e-13 78.2 89 43.8
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 1.5e-11 73.2 88 46.6
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 1.2e-10 70.1 55 67.3
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.6e-10 69.7 85 48.2


User provided reference genes

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