Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 7.3e-63 243.8 131 100.0
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.7e-59 231.5 131 93.9
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.0e-56 223.4 131 93.1
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 2.1e-49 199.1 125 84.0
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.1e-49 199.1 127 81.9
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 3.5e-49 198.4 125 83.2
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 3.5e-49 198.4 127 80.3
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 6.0e-49 197.6 125 83.2
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 6.0e-49 197.6 127 81.9
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.0e-48 196.8 125 82.4
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 8.6e-48 193.7 125 80.0
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 8.6e-48 193.7 125 80.0
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.6e-48 193.7 125 81.6
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 8.6e-48 193.7 125 80.8
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 8.6e-48 193.7 125 80.8
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.1e-47 193.4 125 79.2
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 1.5e-47 193.0 127 79.5
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.5e-47 193.0 125 79.2
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.5e-47 193.0 125 79.2
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.5e-47 193.0 125 79.2
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.9e-47 192.6 125 80.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.5e-47 192.2 125 79.2
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.3e-47 191.8 125 80.0
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 3.3e-47 191.8 125 79.2
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 4.3e-47 191.4 122 82.0
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 4.3e-47 191.4 125 80.8
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 4.3e-47 191.4 125 79.2
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 7.3e-47 190.7 127 81.1
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 9.6e-47 190.3 125 80.8
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 9.6e-47 190.3 125 80.8
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 9.6e-47 190.3 125 79.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 9.6e-47 190.3 127 78.0
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 1.2e-46 189.9 125 78.4
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.2e-46 189.9 127 78.7
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.6e-46 189.5 125 78.4
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.6e-46 189.5 125 78.4
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.6e-46 189.5 125 77.6
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 2.1e-46 189.1 127 76.4
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 2.1e-46 189.1 125 76.8
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 2.8e-46 188.7 127 78.0
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 3.6e-46 188.3 125 77.6
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 3.6e-46 188.3 127 74.8
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 4.7e-46 188.0 127 77.2
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 6.2e-46 187.6 125 76.8
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 6.2e-46 187.6 125 80.0
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 8.1e-46 187.2 125 77.6
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 8.1e-46 187.2 125 77.6
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 8.1e-46 187.2 125 76.0
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.1e-45 186.8 127 76.4
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.4e-45 186.4 125 77.6
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.4e-45 186.4 125 78.4
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.8e-45 186.0 125 77.6
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 2.4e-45 185.7 125 77.6
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 4.0e-45 184.9 125 76.0
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 4.0e-45 184.9 125 76.8
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 4.0e-45 184.9 125 77.6
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 5.2e-45 184.5 125 76.8
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.2e-45 184.5 127 75.6
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 8.9e-45 183.7 127 76.4
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.2e-44 183.3 125 80.0
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.2e-44 183.3 125 76.0
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.0e-44 182.6 125 76.0
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 3.4e-44 181.8 125 75.2
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.4e-44 181.4 131 76.3
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 4.4e-44 181.4 125 75.2
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 7.6e-44 180.6 125 73.6
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 7.6e-44 180.6 127 75.6
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 9.9e-44 180.3 127 75.6
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 9.9e-44 180.3 125 74.4
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.3e-43 179.9 129 76.0
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 2.2e-43 179.1 125 76.0
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 4.9e-43 177.9 125 73.6
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 6.4e-43 177.6 125 73.6
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 6.4e-43 177.6 125 72.8
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.1e-42 176.8 125 73.6
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.1e-42 176.8 125 73.6
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.4e-42 176.4 125 72.8
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.9e-42 176.0 119 76.5
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.2e-41 173.3 125 71.2
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.2e-41 173.3 117 76.9
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.2e-41 173.3 126 77.0
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 1.2e-41 173.3 121 76.0
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 3.0e-40 168.7 109 80.7
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.0e-40 168.7 125 73.6
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 3.3e-39 165.2 119 73.9
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.6e-38 162.9 168 57.7
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 2.1e-38 162.5 125 71.2
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 2.1e-38 162.5 117 76.1
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 1.1e-37 160.2 125 72.0
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.5e-36 156.4 133 63.9
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 4.9e-35 151.4 125 66.4
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 8.4e-35 150.6 125 65.6
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 8.4e-35 150.6 125 65.6
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 8.4e-35 150.6 182 52.7
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 3.2e-34 148.7 116 70.7
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 9.3e-34 147.1 100 77.0
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 9.3e-34 147.1 125 61.6
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.2e-33 146.7 104 73.1
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.2e-33 146.7 125 59.2
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 5.1e-32 141.4 100 72.0
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 5.1e-32 141.4 92 78.3
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.3e-30 136.7 92 78.3
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 6.2e-30 134.4 95 71.6
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 8.1e-30 134.0 100 73.0
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 7.6e-28 127.5 121 55.4
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 1.8e-24 116.3 92 67.4
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.3e-23 112.1 72 77.8
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 1.6e-22 109.8 96 57.3
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.6e-22 109.8 92 66.3
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 8.1e-22 107.5 92 65.2
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 5.3e-21 104.8 93 63.4
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.9e-19 98.2 66 77.3
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 8.4e-19 97.4 102 56.9
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 5.5e-18 94.7 63 73.0
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 7.1e-18 94.4 62 79.0
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 7.1e-18 94.4 62 77.4
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.8e-16 89.7 62 74.2
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 1.1e-15 87.0 62 71.0
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 2.8e-14 82.4 61 67.2
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.4e-13 80.1 61 67.2
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.4e-13 80.1 52 80.8
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 3.8e-11 72.0 117 33.3
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 2.1e-09 66.2 61 54.1
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 2.1e-09 66.2 115 31.3
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 3.7e-06 55.5 36 75.0


User provided reference genes

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