Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3527 Ceratophyllum demersum HOM05D042132 ORTHO05D017280 4.1e-172 607.8 282 100.0
TAR624G1292 Trochodendron aralioides HOM05D002809 ORTHO05D017280 1.2e-102 377.1 280 60.7
Nn5g27648 Nelumbo nucifera HOM05D004302 ORTHO05D017280 9.7e-97 357.5 280 57.5
MBI16_g09752_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D017280 4.2e-92 342.0 259 59.8
ATR0584G262 Amborella trichopoda HOM05D002809 ORTHO05D017280 4.0e-82 308.9 282 50.7
SEGI_39892 Sequoiadendron giganteum HOM05D003005 ORTHO05D017280 1.0e-77 294.3 284 50.4
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 7.1e-39 165.2 287 31.0
SMO361G0323 Selaginella moellendorffii HOM05D002809 ORTHO05D004939 1.0e-37 161.4 278 32.4
Mapoly0072s0056 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.1e-34 151.4 299 31.4
Os01g0519100 Oryza sativa ssp. japonica HOM05D042132 ORTHO05D017280 1.7e-24 117.5 235 31.1
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 2.9e-24 116.7 289 29.1
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 3.5e-22 109.8 287 26.5
Pp3c1_27000 Physcomitrium patens HOM05D002809 ORTHO05D004563 6.0e-22 109.0 289 28.4
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 1.0e-21 108.2 287 26.1
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.3e-21 107.1 272 30.9
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis HOM05D002809 ORTHO05D004939 6.7e-21 105.5 288 27.8
Cc10_g05770 Coffea canephora HOM05D007423 ORTHO05D009091 3.3e-20 103.2 264 26.9
Zm00001eb366180 Zea mays HOM05D042132 ORTHO05D017280 3.7e-19 99.8 184 31.5
MELO3C010807.2 Cucumis melo HOM05D007423 ORTHO05D009091 8.1e-19 98.6 297 27.9
Mapoly0019s0019 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.1e-18 96.7 288 26.0
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 3.1e-18 96.7 275 24.4
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 9.0e-18 95.1 293 26.3
CsaV3_2G026150 Cucumis sativus L. HOM05D007423 ORTHO05D009091 7.6e-17 92.0 290 27.2
Lalb_Chr12g0209141 Lupinus albus HOM05D005977 ORTHO05D007546 1.0e-16 91.7 296 27.4
Aqoxy5G02276 Aquilegia oxysepala HOM05D002809 ORTHO05D004939 2.2e-16 90.5 291 23.7
Hma1.2p1_0819F.1_g223720 Hydrangea macrophylla HOM05D007423 ORTHO05D009091 2.9e-16 90.1 281 28.5
Pp3c10_20160 Physcomitrium patens HOM05D003005 ORTHO05D004563 4.9e-16 89.4 257 28.8
Pp3c3_32280 Physcomitrium patens HOM05D002809 ORTHO05D004563 4.9e-16 89.4 256 28.5
HanXRQChr05g0150951 Helianthus annuus HOM05D007423 ORTHO05D009091 6.5e-16 89.0 252 27.0
QL12p038053 Quercus lobata HOM05D007423 ORTHO05D009091 6.5e-16 89.0 261 26.1
MD10G1227400 Malus domestica HOM05D005977 ORTHO05D007546 1.4e-15 87.8 264 28.4
MSTRG.498 Avicennia marina HOM05D002809 ORTHO05D004563 1.9e-15 87.4 260 28.1
Mapoly0033s0124 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.9e-15 87.4 291 26.8
SEGI_17583 Sequoiadendron giganteum HOM05D002809 ORTHO05D004563 1.9e-15 87.4 259 27.0
Dinv39224 Davidia involucrata HOM05D007423 ORTHO05D009091 3.2e-15 86.7 286 27.3
arahy.Tifrunner.gnm1.ann1.N7CMLX Arachis hypogaea HOM05D005977 ORTHO05D007546 4.2e-15 86.3 300 26.0
arahy.Tifrunner.gnm1.ann1.GTY4NG Arachis hypogaea HOM05D005977 ORTHO05D007546 7.1e-15 85.5 300 26.3
SEGI_09375 Sequoiadendron giganteum HOM05D003005 ORTHO05D004170 1.6e-14 84.3 271 27.3
DCAR_026456 Daucus carota HOM05D002809 ORTHO05D004563 2.7e-14 83.6 259 26.6
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 2.7e-14 83.6 278 23.0
AagrBONN_evm.TU.Sc2ySwM_228.4047 Anthoceros agrestis HOM05D004302 ORTHO05D010190 7.9e-14 82.0 257 29.6
Duzib116G0599 Durio zibethinus HOM05D007423 ORTHO05D009091 1.3e-13 81.3 259 26.3
MBI07_g06328_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 1.8e-13 80.9 309 24.9
TAR381G1462 Trochodendron aralioides HOM05D007423 ORTHO05D009091 1.8e-13 80.9 266 24.4
PSO478G1885 Papaver somniferum HOM05D002809 ORTHO05D004563 3.0e-13 80.1 291 26.8
Lalb_Chr13g0293451 Lupinus albus HOM05D005977 ORTHO05D007546 3.9e-13 79.7 296 26.7
CSS0001428 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 5.1e-13 79.3 292 26.4
GSVIVG01009345001 Vitis vinifera HOM05D007423 ORTHO05D009091 8.7e-13 78.6 258 27.1
SalBow2G0967 Salvia bowleyana HOM05D002809 ORTHO05D004563 1.1e-12 78.2 242 26.9
QL03p052448 Quercus lobata HOM05D002809 ORTHO05D004563 1.5e-12 77.8 289 25.3
TAR629G1933 Trochodendron aralioides HOM05D002809 ORTHO05D004563 1.9e-12 77.4 258 27.5
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 2.5e-12 77.0 274 25.2
Nn3g16449 Nelumbo nucifera HOM05D002809 ORTHO05D004563 7.4e-12 75.5 271 26.6
Phvul.001G027100 Phaseolus vulgaris HOM05D007423 ORTHO05D009091 7.4e-12 75.5 274 27.7
Pp3c14_15830 Physcomitrium patens HOM05D002809 ORTHO05D009385 7.4e-12 75.5 226 28.8
SHI24793 Sapria himalayana HOM05D005977 ORTHO05D007546 7.4e-12 75.5 163 30.7
Oeu053610.1 Olea europaea HOM05D007423 ORTHO05D009091 9.6e-12 75.1 281 26.3
Aqoxy5G03341 Aquilegia oxysepala HOM05D002809 ORTHO05D004563 1.3e-11 74.7 287 23.7
Glyma.14G088700 Glycine max HOM05D007423 ORTHO05D009091 1.6e-11 74.3 257 29.2
HanXRQChr08g0207911 Helianthus annuus HOM05D002809 ORTHO05D004563 1.6e-11 74.3 290 23.8
MBI07_g18750_MAGBIO Magnolia biondii HOM05D002809 ORTHO05D004563 1.6e-11 74.3 295 24.4
BraA09t37631Z Brassica rapa HOM05D007423 ORTHO05D009091 2.8e-11 73.6 278 25.2
Dinv10947 Davidia involucrata HOM05D002809 ORTHO05D004563 2.8e-11 73.6 258 27.1
Mapoly0083s0085 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.7e-11 73.2 285 24.6
AT5G43190 Arabidopsis thaliana HOM05D007423 ORTHO05D009091 4.8e-11 72.8 289 24.9
MBI16_g07988_MAGBIO Magnolia biondii HOM05D007423 ORTHO05D009091 4.8e-11 72.8 187 27.3
VMungo1309G2697 Vigna mungo HOM05D007423 ORTHO05D009091 6.3e-11 72.4 240 25.4
GSVIVG01010498001 Vitis vinifera HOM05D002809 ORTHO05D004563 6.3e-11 72.4 248 24.6
unitig_899.g14814 Utricularia gibba HOM05D003005 ORTHO05D004170 1.1e-10 71.6 310 24.2
Glyma.04G045200 Glycine max HOM05D007423 ORTHO05D009091 1.4e-10 71.2 239 27.6
CSS0041295 Camellia sinensis var. sinensis HOM05D007423 ORTHO05D009091 1.8e-10 70.9 168 28.0
unitig_747.g21123 Utricularia gibba HOM05D002809 ORTHO05D004563 1.8e-10 70.9 196 28.1
Carub.0008s0548 Capsella rubella HOM05D007423 ORTHO05D009091 2.4e-10 70.5 292 25.7
FvH4_3g03990 Fragaria vesca HOM05D005977 ORTHO05D007546 6.9e-10 68.9 162 29.6
Phvul.009G071100 Phaseolus vulgaris HOM05D007423 ORTHO05D009091 6.9e-10 68.9 256 27.7
SMO304G0062 Selaginella moellendorffii HOM05D003005 ORTHO05D004170 6.9e-10 68.9 307 22.8
vmacro11018 Vaccinium macrocarpon HOM05D005977 ORTHO05D007546 1.2e-09 68.2 141 29.1
unitig_699.g19960 Utricularia gibba HOM05D002809 ORTHO05D004563 1.5e-09 67.8 227 29.1
Sp2g08010 Schrenkiella parvula HOM05D007423 ORTHO05D009091 7.6e-09 65.5 293 23.9
A09p53650 Brassica napus HOM05D003005 ORTHO05D004170 1.3e-08 64.7 161 28.0
BraA09t40787Z Brassica rapa HOM05D003005 ORTHO05D004170 1.3e-08 64.7 161 28.0
THA.LOC104817327 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 1.3e-08 64.7 198 26.3
Oeu040517.1 Olea europaea HOM05D007423 ORTHO05D009091 1.7e-08 64.3 263 22.8
ECA232G4918 Erigeron canadensis HOM05D005977 ORTHO05D007546 2.2e-08 63.9 166 27.1
MBI01_g10122_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 2.9e-08 63.5 234 22.6
Actinidia22694 Actinidia chinensis HOM05D007423 ORTHO05D009091 3.8e-08 63.2 281 23.5
Oeu036574.1 Olea europaea HOM05D003005 ORTHO05D004170 3.8e-08 63.2 121 27.3
THA.LOC104802052 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 3.8e-08 63.2 121 28.9
BcaB02g07368 Brassica carinata HOM05D003005 ORTHO05D004170 6.5e-08 62.4 121 28.1
A07p25600 Brassica napus HOM05D003005 ORTHO05D004170 8.4e-08 62.0 121 27.3
BraA07t30201Z Brassica rapa HOM05D003005 ORTHO05D004170 8.4e-08 62.0 121 27.3
Mapoly0066s0008 Marchantia polymorpha HOM05D004302 ORTHO05D017280 8.4e-08 62.0 278 25.5
BcaC07g42677 Brassica carinata HOM05D003005 ORTHO05D004170 1.1e-07 61.6 161 28.0
Oeu035470.1 Olea europaea HOM05D002809 ORTHO05D004563 1.1e-07 61.6 184 27.7
C06p27590 Brassica napus HOM05D003005 ORTHO05D004170 1.4e-07 61.2 121 28.9
BolC6t37928H Brassica oleracea HOM05D003005 ORTHO05D004170 1.4e-07 61.2 121 28.9
Sopen05g028590 Solanum pennellii HOM05D003005 ORTHO05D004170 1.4e-07 61.2 122 27.9
Mapoly0003s0155 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.9e-07 60.8 182 27.5
Sp5g01820 Schrenkiella parvula HOM05D003005 ORTHO05D004170 1.9e-07 60.8 121 28.9
ClCG08G016460 Citrullus lanatus HOM05D007423 ORTHO05D009091 2.5e-07 60.5 163 27.0
BcaC08g45140 Brassica carinata HOM05D003005 ORTHO05D004170 3.2e-07 60.1 121 28.1
Mapoly0001s0123 Marchantia polymorpha HOM05D004302 ORTHO05D007631 3.2e-07 60.1 207 26.6
AL8G17420 Arabidopsis lyrata HOM05D007423 ORTHO05D009091 5.5e-07 59.3 207 26.1
Actinidia10198 Actinidia chinensis HOM05D007423 ORTHO05D009091 1.2e-06 58.2 184 25.5
AL5G43980 Arabidopsis lyrata HOM05D003005 ORTHO05D004170 1.2e-06 58.2 121 28.1
AT3G61590 Arabidopsis thaliana HOM05D003005 ORTHO05D004170 1.2e-06 58.2 121 28.1
Carub.0005s2828 Capsella rubella HOM05D003005 ORTHO05D004170 2.7e-06 57.0 121 27.3


User provided reference genes

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