Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3504 Ceratophyllum demersum HOM05D004583 ORTHO05D005469 4.4e-92 341.3 173 100.0
ATR0705G143 Amborella trichopoda HOM05D004583 ORTHO05D005469 8.2e-46 187.6 157 65.6
Cc08_g09870 Coffea canephora HOM05D004583 ORTHO05D005469 2.4e-45 186.0 156 65.4
Potri.018G046700 Populus trichocarpa HOM05D004583 ORTHO05D005469 3.1e-45 185.7 151 65.6
TWI63G0012 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 4.1e-45 185.3 151 65.6
Nn6g35316 Nelumbo nucifera HOM05D004583 ORTHO05D005469 5.3e-45 184.9 156 65.4
Dinv23388 Davidia involucrata HOM05D004583 ORTHO05D005469 1.5e-44 183.3 156 64.1
PSO210G2011 Papaver somniferum HOM05D004583 ORTHO05D005469 3.4e-44 182.2 160 64.4
PSO210G3632 Papaver somniferum HOM05D004583 ORTHO05D005469 2.2e-43 179.5 157 64.3
Sabra18G0045300 Salix brachista HOM05D004583 ORTHO05D005469 6.5e-43 177.9 153 63.4
TAR636G0454 Trochodendron aralioides HOM05D004583 ORTHO05D005469 6.5e-43 177.9 156 64.1
Prupe.1G445300 Prunus persica HOM05D004583 ORTHO05D005469 1.4e-42 176.8 153 63.4
Sc09g0009440 Simmondsia chinensis HOM05D004583 ORTHO05D005469 1.9e-42 176.4 154 64.3
GSVIVG01035292001 Vitis vinifera HOM05D004583 ORTHO05D005469 2.5e-42 176.0 155 60.6
QL12p041048 Quercus lobata HOM05D004583 ORTHO05D005469 3.2e-42 175.6 155 61.3
Manes.16G073800 Manihot esculenta HOM05D004583 ORTHO05D005469 5.5e-42 174.9 151 58.3
CSS0042231 Camellia sinensis var. sinensis HOM05D004583 ORTHO05D005469 7.2e-42 174.5 155 61.3
CiPaw.07G202200 Carya illinoinensis HOM05D004583 ORTHO05D005469 1.2e-41 173.7 158 62.7
Hma1.2p1_0049F.1_g028360 Hydrangea macrophylla HOM05D004583 ORTHO05D005469 1.2e-41 173.7 158 62.7
MD15G1090900 Malus domestica HOM05D004583 ORTHO05D005469 1.2e-41 173.7 153 61.4
MD08G1111400 Malus domestica HOM05D004583 ORTHO05D005469 1.6e-41 173.3 152 60.5
HanXRQChr11g0352321 Helianthus annuus HOM05D004583 ORTHO05D005469 2.3e-40 169.5 154 61.7
AUR62009234 Chenopodium quinoa HOM05D004583 ORTHO05D005469 6.7e-40 167.9 176 55.1
Haze_21912 Corylus avellana HOM05D004583 ORTHO05D005469 6.7e-40 167.9 155 60.0
Lsat_1_v5_gn_1_42160 Lactuca sativa HOM05D004583 ORTHO05D005469 6.7e-40 167.9 156 60.9
Cfa013385 Carpinus fangiana HOM05D004583 ORTHO05D005469 2.0e-39 166.4 155 59.4
MELO3C011128.2 Cucumis melo HOM05D004583 ORTHO05D005469 2.0e-39 166.4 159 58.5
ClCG08G012110 Citrullus lanatus HOM05D004583 ORTHO05D005469 2.5e-39 166.0 157 58.6
ECA248G2390 Erigeron canadensis HOM05D004583 ORTHO05D005469 2.5e-39 166.0 158 58.9
CiPaw.08G027000 Carya illinoinensis HOM05D004583 ORTHO05D005469 4.3e-39 165.2 157 61.8
Ciclev10007949m.g Citrus clementina HOM05D004583 ORTHO05D005469 4.3e-39 165.2 154 59.1
CsaV3_2G030710 Cucumis sativus L. HOM05D004583 ORTHO05D005469 5.7e-39 164.9 159 58.5
Hund03382 Selenicereus undatus HOM05D004583 ORTHO05D005469 1.3e-38 163.7 158 55.7
CANSAT25G3668 Cannabis sativa HOM05D004583 ORTHO05D005469 4.8e-38 161.8 158 56.3
MBI04_g20300_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 4.8e-38 161.8 144 60.4
MBI04_g42480_MAGBIO Magnolia biondii HOM05D004583 ORTHO05D005469 4.8e-38 161.8 144 60.4
Actinidia15745 Actinidia chinensis HOM05D004583 ORTHO05D005469 8.2e-38 161.0 159 59.1
SHI18791 Sapria himalayana HOM05D004583 ORTHO05D005469 1.4e-37 160.2 151 55.6
Solyc12g095840.2 Solanum lycopersicum HOM05D004583 ORTHO05D005469 2.4e-37 159.5 156 57.7
Sopen12g031740 Solanum pennellii HOM05D004583 ORTHO05D005469 2.4e-37 159.5 156 57.7
TWI34G1497 Tripterygium wilfordii HOM05D004583 ORTHO05D005469 3.1e-37 159.1 141 62.4
TAR624G1263 Trochodendron aralioides HOM05D004583 ORTHO05D005469 4.1e-37 158.7 156 54.5
AUR62041963 Chenopodium quinoa HOM05D004583 ORTHO05D005469 5.3e-37 158.3 196 49.0
Sed0024833 Sechium edule HOM05D004583 ORTHO05D005469 5.3e-37 158.3 157 57.3
Ah.10g034890 Amaranthus hybridus HOM05D004583 ORTHO05D005469 6.9e-37 157.9 184 49.5
DCAR_004462 Daucus carota HOM05D004583 ORTHO05D005469 6.9e-37 157.9 151 58.3
Nitab4.5_0001737g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 1.2e-36 157.1 155 56.8
FAN15G2845 Fragaria x ananassa HOM05D004583 ORTHO05D005469 2.0e-36 156.4 152 57.2
Gohir.A07G022241 Gossypium hirsutum HOM05D004583 ORTHO05D005469 2.0e-36 156.4 145 59.3
Pp3c5_21890 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.0e-35 154.1 155 58.7
Pp3c5_21897 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.0e-35 154.1 155 58.7
AUR62041959 Chenopodium quinoa HOM05D004583 ORTHO05D005469 1.3e-35 153.7 218 45.0
Sabra06G0184800 Salix brachista HOM05D004583 ORTHO05D005469 1.3e-35 153.7 153 56.2
Gohir.D07G025000 Gossypium hirsutum HOM05D004583 ORTHO05D005469 1.7e-35 153.3 145 58.6
Nitab4.5_0001309g0070 Nicotiana tabacum HOM05D004583 ORTHO05D005469 3.8e-35 152.1 157 54.1
Peaxi162Scf00064g01528 Petunia axillaris HOM05D004583 ORTHO05D005469 3.8e-35 152.1 158 56.3
Eucgr.C00611 Eucalyptus grandis HOM05D004583 ORTHO05D005469 5.0e-35 151.8 161 54.0
Gorai.001G026100 Gossypium raimondii HOM05D004583 ORTHO05D005469 5.0e-35 151.8 145 57.9
COL.COLO4_20995 Corchorus olitorius HOM05D004583 ORTHO05D005469 6.5e-35 151.4 146 58.9
AL4G17420 Arabidopsis lyrata HOM05D004583 ORTHO05D005469 8.5e-35 151.0 164 53.0
AT2G25740 Arabidopsis thaliana HOM05D004583 ORTHO05D005469 1.1e-34 150.6 165 53.3
Pp3c6_5840 Physcomitrium patens HOM05D004583 ORTHO05D005469 1.1e-34 150.6 155 58.7
Potri.006G236400 Populus trichocarpa HOM05D004583 ORTHO05D005469 1.1e-34 150.6 154 57.1
SEGI_02523 Sequoiadendron giganteum HOM05D004583 ORTHO05D005469 1.9e-34 149.8 150 58.7
BcaB08g35216 Brassica carinata HOM05D004583 ORTHO05D005469 2.5e-34 149.4 167 50.9
RcHm_v2.0_Chr6g0306601 Rosa chinensis HOM05D004583 ORTHO05D005469 2.5e-34 149.4 153 54.2
Thecc.09G047500 Theobroma cacao HOM05D004583 ORTHO05D005469 3.2e-34 149.1 145 58.6
Actinidia14686 Actinidia chinensis HOM05D004583 ORTHO05D005469 7.2e-34 147.9 138 61.6
Carub.0004s0553 Capsella rubella HOM05D004583 ORTHO05D005469 7.2e-34 147.9 166 51.2
FvH4_2g35320 Fragaria vesca HOM05D004583 ORTHO05D005469 7.2e-34 147.9 152 53.9
FAN20G1421 Fragaria x ananassa HOM05D004583 ORTHO05D005469 7.2e-34 147.9 152 53.9
Phvul.009G111600 Phaseolus vulgaris HOM05D004583 ORTHO05D005469 7.2e-34 147.9 168 50.6
Psat6g035200 Pisum sativum HOM05D004583 ORTHO05D005469 7.2e-34 147.9 161 50.3
Migut.E01537 Erythranthe guttata HOM05D004583 ORTHO05D005469 2.1e-33 146.4 153 53.6
VMungo1309G0941 Vigna mungo HOM05D004583 ORTHO05D005469 2.1e-33 146.4 169 50.3
Thhalv10001956m.g Eutrema salsugineum HOM05D004583 ORTHO05D005469 3.6e-33 145.6 163 52.8
FAN27G2572 Fragaria x ananassa HOM05D004583 ORTHO05D005469 3.6e-33 145.6 159 52.2
Rhsim02G0175600 Rhododendron simsii HOM05D004583 ORTHO05D005469 3.6e-33 145.6 138 58.0
Duzib168G1134 Durio zibethinus HOM05D004583 ORTHO05D005469 4.7e-33 145.2 166 51.8
Lj7C698G10 Lonicera japonica HOM05D004583 ORTHO05D005469 7.9e-33 144.4 106 67.0
PGR031G0432 Punica granatum HOM05D004583 ORTHO05D005469 7.9e-33 144.4 160 52.5
TPR.G24505 Trifolium pratense HOM05D004583 ORTHO05D005469 1.0e-32 144.1 169 51.5
THA.LOC104803803 Tarenaya hassleriana HOM05D004583 ORTHO05D005469 1.8e-32 143.3 163 53.4
Medtr1g007160 Medicago truncatula HOM05D004583 ORTHO05D005469 3.0e-32 142.5 154 51.9
Sp4g05420 Schrenkiella parvula HOM05D004583 ORTHO05D005469 3.0e-32 142.5 163 52.1
arahy.Tifrunner.gnm1.ann1.R6LPAT Arachis hypogaea HOM05D004583 ORTHO05D005469 3.9e-32 142.1 161 51.6
Aa31LG5G9840 Aethionema arabicum HOM05D004583 ORTHO05D005469 6.7e-32 141.4 161 52.8
Rhsim02G0175400 Rhododendron simsii HOM05D004583 ORTHO05D005469 6.7e-32 141.4 154 52.6
arahy.Tifrunner.gnm1.ann1.6GB5J4 Arachis hypogaea HOM05D004583 ORTHO05D005469 1.1e-31 140.6 161 50.9
SalBow1G6079 Salvia bowleyana HOM05D004583 ORTHO05D005469 1.1e-31 140.6 153 51.6
BolC8t51418H Brassica oleracea HOM05D004583 ORTHO05D005469 1.5e-31 140.2 163 49.1
SGA_v2.0_scaffold169G38659 Striga asiatica HOM05D004583 ORTHO05D005469 1.5e-31 140.2 152 53.9
Aqoxy7G03869 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 2.0e-31 139.8 162 51.2
BcaC07g40848 Brassica carinata HOM05D004583 ORTHO05D005469 2.0e-31 139.8 164 48.8
C08p38460 Brassica napus HOM05D004583 ORTHO05D005469 2.0e-31 139.8 164 48.8
Oeu038813.1 Olea europaea HOM05D004583 ORTHO05D005469 2.0e-31 139.8 156 54.5
BolC3t15588H Brassica oleracea HOM05D004583 ORTHO05D005469 3.3e-31 139.0 162 51.2
BcaC01g04904 Brassica carinata HOM05D004583 ORTHO05D005469 4.4e-31 138.7 165 49.7
C03p32470 Brassica napus HOM05D004583 ORTHO05D005469 4.4e-31 138.7 165 49.7
BraA03t11919Z Brassica rapa HOM05D004583 ORTHO05D005469 4.4e-31 138.7 167 50.3
CAN.G208.65 Capsicum annuum HOM05D004583 ORTHO05D005469 4.4e-31 138.7 130 57.7
Os05g0521500 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 4.4e-31 138.7 167 51.5
A03p27060 Brassica napus HOM05D004583 ORTHO05D005469 5.7e-31 138.3 167 50.3
A09p55470 Brassica napus HOM05D004583 ORTHO05D005469 5.7e-31 138.3 169 47.9
BraA09t40949Z Brassica rapa HOM05D004583 ORTHO05D005469 5.7e-31 138.3 169 47.9
Ca_19225_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 5.7e-31 138.3 163 49.7
Lalb_Chr22g0361041 Lupinus albus HOM05D004583 ORTHO05D005469 5.7e-31 138.3 157 51.6
Os01g0743600 Oryza sativa ssp. japonica HOM05D004583 ORTHO05D005469 2.2e-30 136.3 163 49.7
unitig_32.g11475 Utricularia gibba HOM05D004583 ORTHO05D005469 2.2e-30 136.3 151 53.6
EL10Ac2g03985 Beta vulgaris HOM05D004583 ORTHO05D005469 2.8e-30 136.0 159 52.2
MSTRG.14029 Avicennia marina HOM05D004583 ORTHO05D005469 6.3e-30 134.8 154 51.9
Mapoly0168s0005 Marchantia polymorpha HOM05D004583 ORTHO05D005469 6.3e-30 134.8 128 56.2
Atru.chr7.2058 Acer truncatum HOM05D004583 ORTHO05D005469 1.4e-29 133.7 151 53.6
Lj4g0027824 Lotus japonicus HOM05D004583 ORTHO05D005469 2.4e-29 132.9 137 53.3
Pp3c15_22980 Physcomitrium patens HOM05D004583 ORTHO05D005469 9.1e-29 131.0 112 60.7
Lj1g0018877 Lotus japonicus HOM05D004583 ORTHO05D005469 2.6e-28 129.4 162 45.7
Pp3c9_19040 Physcomitrium patens HOM05D004583 ORTHO05D005469 7.7e-28 127.9 110 60.9
Zm00001eb293710 Zea mays HOM05D004583 ORTHO05D005469 1.0e-27 127.5 169 46.7
AagrBONN_evm.TU.Sc2ySwM_117.1952 Anthoceros agrestis HOM05D004583 ORTHO05D005469 2.9e-27 125.9 157 51.0
Zm00001eb153580 Zea mays HOM05D004583 ORTHO05D005469 2.5e-26 122.9 162 45.7
Ca_15574_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 3.2e-26 122.5 149 48.3
Aqoxy7G01424 Aquilegia oxysepala HOM05D004583 ORTHO05D005469 3.6e-25 119.0 151 47.0
arahy.Tifrunner.gnm1.ann1.AK4U3Y Arachis hypogaea HOM05D004583 ORTHO05D005469 4.7e-25 118.6 140 48.6
arahy.Tifrunner.gnm1.ann1.M0YYQ7 Arachis hypogaea HOM05D004583 ORTHO05D005469 6.1e-25 118.2 129 50.4
CANSAT35G1178 Cannabis sativa HOM05D004583 ORTHO05D005469 1.0e-24 117.5 170 45.9
CARHR115490 Cardamine hirsuta HOM05D004583 ORTHO05D005469 1.0e-24 117.5 109 56.9
Psat5g020600 Pisum sativum HOM05D004583 ORTHO05D005469 1.0e-24 117.5 101 58.4
Medtr3g110340 Medicago truncatula HOM05D004583 ORTHO05D005469 1.8e-24 116.7 153 47.1
Glyma.06G087900 Glycine max HOM05D004583 ORTHO05D005469 6.7e-24 114.8 146 47.3
Lalb_Chr23g0269711 Lupinus albus HOM05D004583 ORTHO05D005469 2.0e-23 113.2 102 54.9
Ca_12761_v3 Cicer arietinum L. HOM05D004583 ORTHO05D005469 2.6e-23 112.8 115 52.2
TPR.G12398 Trifolium pratense HOM05D004583 ORTHO05D005469 3.3e-23 112.5 166 42.2
CBR_g21950 Chara braunii HOM05D004583 ORTHO05D005469 4.4e-23 112.1 168 44.0
HPP92_022972 Vanilla planifolia HOM05D004583 ORTHO05D005469 1.1e-21 107.5 97 62.9
MSTRG.1664 Avicennia marina HOM05D004583 ORTHO05D005469 8.5e-19 97.8 78 61.5
DCAR_003076 Daucus carota HOM05D004583 ORTHO05D005469 8.5e-19 97.8 145 44.8
SMO238G0017 Selaginella moellendorffii HOM05D004583 ORTHO05D005469 8.5e-19 97.8 105 50.5
Glyma.04G086400 Glycine max HOM05D004583 ORTHO05D005469 1.2e-15 87.4 78 61.5
Pp3c27_6400 Physcomitrium patens HOM05D004583 ORTHO05D005469 4.4e-15 85.5 105 52.4
Pp3c16_16060 Physcomitrium patens HOM05D004583 ORTHO05D005469 2.0e-12 76.6 155 40.0
vmacro11048 Vaccinium macrocarpon HOM05D004583 ORTHO05D005469 1.0e-11 74.3 61 60.7
Cpa.g.c46051 Carica papaya HOM05D004583 ORTHO05D005469 6.8e-08 61.6 39 69.2
CDE04G2234 Ceratophyllum demersum HOM05D001300 ORTHO05D004991 6.8e-08 61.6 33 97.0
HPP92_022971 Vanilla planifolia HOM05D004583 ORTHO05D005469 2.0e-07 60.1 55 60.0
arahy.Tifrunner.gnm1.ann1.E99XLH Arachis hypogaea HOM05D002152 ORTHO05D031610 1.3e-06 57.4 84 40.5
arahy.Tifrunner.gnm1.ann1.YJBK1K Arachis hypogaea HOM05D004583 ORTHO05D005469 8.3e-06 54.7 84 39.3


User provided reference genes

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