Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 5.9e-77 290.8 149 100.0
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.8e-60 235.0 126 97.6
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.7e-34 148.3 147 55.8
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 5.8e-32 141.4 145 56.6
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 7.6e-32 141.0 156 51.3
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 9.9e-32 140.6 156 50.6
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 3.8e-31 138.7 146 50.7
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 5.4e-30 134.8 145 51.0
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 2.1e-29 132.9 144 50.7
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.7e-29 132.5 146 48.6
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 3.5e-29 132.1 145 48.3
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.0e-28 130.6 146 47.9
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.3e-28 130.2 146 47.9
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 5.1e-28 128.3 143 51.0
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 5.1e-28 128.3 143 49.0
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 6.6e-28 127.9 150 46.7
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 8.7e-28 127.5 145 50.3
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.5e-27 126.7 146 48.6
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.5e-27 126.7 149 49.7
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.9e-27 126.3 146 48.6
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.9e-27 126.3 144 48.6
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.9e-27 126.3 114 57.0
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.5e-27 125.9 151 47.7
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 2.5e-27 125.9 148 49.3
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 3.3e-27 125.6 150 47.3
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 5.6e-27 124.8 144 49.3
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 1.6e-26 123.2 146 48.6
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 2.1e-26 122.9 144 47.2
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 2.8e-26 122.5 117 53.8
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 2.8e-26 122.5 144 46.5
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 3.6e-26 122.1 145 47.6
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 4.7e-26 121.7 145 46.9
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 4.0e-25 118.6 107 56.1
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 4.4e-24 115.2 148 44.6
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 9.9e-24 114.0 149 45.6
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 1.7e-23 113.2 144 47.2
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.9e-23 112.5 144 45.1
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.8e-23 112.1 148 44.6
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 4.9e-23 111.7 154 44.8
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 6.4e-23 111.3 144 44.4
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 6.4e-23 111.3 143 44.1
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.9e-22 109.8 152 44.7
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.9e-22 109.8 143 42.7
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.4e-22 108.2 152 44.1
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 5.4e-22 108.2 152 44.7
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 9.3e-22 107.5 144 45.1
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 1.6e-21 106.7 146 41.8
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 1.6e-21 106.7 146 43.2
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 1.6e-21 106.7 148 44.6
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 2.1e-21 106.3 142 45.1
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 2.7e-21 105.9 148 43.2
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.7e-21 105.9 152 42.8
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.3e-20 103.6 146 42.5
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 1.3e-20 103.6 109 49.5
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.3e-20 102.8 148 43.9
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 3.9e-20 102.1 129 43.4
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.5e-19 100.1 116 46.6
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 2.5e-19 99.4 148 41.9
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 3.3e-19 99.0 107 50.5
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 4.3e-19 98.6 121 47.1
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 9.6e-19 97.4 108 49.1
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 9.6e-19 97.4 146 43.8
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.3e-18 97.1 146 41.8
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.6e-18 96.7 104 47.1
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 6.2e-18 94.7 145 40.7
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 3.1e-17 92.4 107 51.4
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.0e-17 92.0 80 57.5
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 4.5e-16 88.6 127 44.9
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 1.1e-14 84.0 151 38.4
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 2.4e-14 82.8 114 43.9
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 5.4e-14 81.6 129 41.1
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 5.4e-14 81.6 129 42.6
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 7.1e-14 81.3 149 38.9
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 1.6e-13 80.1 129 41.9
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 2.7e-13 79.3 144 40.3
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 3.5e-13 79.0 130 39.2
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 6.0e-13 78.2 131 39.7
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 9.6e-11 70.9 92 44.6
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 6.2e-10 68.2 79 49.4
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 8.4e-07 57.8 99 39.4


User provided reference genes

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