Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3415 Ceratophyllum demersum HOM05D006760 ORTHO05D008121 1.0e-154 550.1 289 100.0
TAR629G0494 Trochodendron aralioides HOM05D006760 ORTHO05D008121 3.8e-56 222.6 258 50.0
CDE11G0454 Ceratophyllum demersum HOM05D006760 ORTHO05D008121 4.7e-54 215.7 240 57.5
CSS0041869 Camellia sinensis var. sinensis HOM05D006760 ORTHO05D008121 4.0e-45 186.0 222 48.6
CSS0002453 Camellia sinensis var. sinensis HOM05D006760 ORTHO05D008121 2.8e-43 179.9 224 47.8
Dinv37413 Davidia involucrata HOM05D006760 ORTHO05D008121 3.7e-43 179.5 239 45.6
Dinv41816 Davidia involucrata HOM05D006760 ORTHO05D008121 8.6e-40 168.3 206 49.0
PSO063G6156 Papaver somniferum HOM05D006760 ORTHO05D008121 9.5e-39 164.9 145 61.4
Nitab4.5_0000030g0230 Nicotiana tabacum HOM05D006760 ORTHO05D008121 1.2e-38 164.5 223 46.6
Nitab4.5_0001023g0160 Nicotiana tabacum HOM05D006760 ORTHO05D008121 1.6e-38 164.1 223 46.6
CAN.G800.11 Capsicum annuum HOM05D006760 ORTHO05D008121 2.1e-38 163.7 232 44.0
Oeu046799.1 Olea europaea HOM05D006760 ORTHO05D008121 2.1e-38 163.7 222 47.3
Hma1.2p1_1873F.1_g306180 Hydrangea macrophylla HOM05D006760 ORTHO05D008121 2.8e-38 163.3 223 46.2
PSO782G3372 Papaver somniferum HOM05D006760 ORTHO05D008121 3.6e-38 162.9 145 60.7
Cc00_g07450 Coffea canephora HOM05D006760 ORTHO05D008121 1.0e-37 161.4 223 44.4
Actinidia32779 Actinidia chinensis HOM05D006760 ORTHO05D008121 8.9e-37 158.3 236 43.6
Nn1g02052 Nelumbo nucifera HOM05D006760 ORTHO05D008121 2.0e-36 157.1 263 39.5
Actinidia01259 Actinidia chinensis HOM05D006760 ORTHO05D008121 7.5e-36 155.2 251 43.0
SalBow8G1564 Salvia bowleyana HOM05D006760 ORTHO05D008121 1.3e-35 154.5 224 45.5
HPP92_015128 Vanilla planifolia HOM05D006760 ORTHO05D008121 1.7e-35 154.1 136 61.8
Sopen08g024330 Solanum pennellii HOM05D006760 ORTHO05D008121 2.2e-35 153.7 232 43.1
PGSC0003DMG400030849 Solanum tuberosum HOM05D006760 ORTHO05D008121 2.9e-35 153.3 232 42.7
Solyc08g075680.4 Solanum lycopersicum HOM05D006760 ORTHO05D008121 3.7e-35 152.9 232 43.1
Aqoxy3G00108 Aquilegia oxysepala HOM05D006760 ORTHO05D008121 4.9e-35 152.5 296 38.5
DCAR_006312 Daucus carota HOM05D006760 ORTHO05D008121 1.9e-34 150.6 241 41.1
Potri.001G130100 Populus trichocarpa HOM05D006760 ORTHO05D008121 7.0e-34 148.7 227 42.3
MSTRG.1766 Avicennia marina HOM05D006760 ORTHO05D008121 1.6e-33 147.5 223 45.7
Migut.E01355 Erythranthe guttata HOM05D006760 ORTHO05D008121 1.6e-33 147.5 223 42.6
unitig_699.g19677 Utricularia gibba HOM05D006760 ORTHO05D008121 2.7e-33 146.7 141 55.3
SGA_v2.0_scaffold111G31361 Striga asiatica HOM05D006760 ORTHO05D008121 3.5e-33 146.4 130 60.8
Lsat_1_v5_gn_3_23361 Lactuca sativa HOM05D006760 ORTHO05D008121 1.0e-32 144.8 232 40.9
Manes.15G182500 Manihot esculenta HOM05D006760 ORTHO05D008121 1.0e-32 144.8 222 41.4
ECA246G2456 Erigeron canadensis HOM05D006760 ORTHO05D008121 1.7e-32 144.1 204 43.6
AUR62007417 Chenopodium quinoa HOM05D006760 ORTHO05D008121 3.9e-32 142.9 287 37.3
MSTRG.13908 Avicennia marina HOM05D006760 ORTHO05D008121 5.0e-32 142.5 222 42.8
Peaxi162Scf00193g00023 Petunia axillaris HOM05D006760 ORTHO05D008121 5.0e-32 142.5 241 42.3
Sabra01G0100600 Salix brachista HOM05D006760 ORTHO05D008121 1.5e-31 141.0 227 41.0
TWI12G1140 Tripterygium wilfordii HOM05D006760 ORTHO05D008121 3.3e-31 139.8 238 40.3
Rhsim11G0034300 Rhododendron simsii HOM05D006760 ORTHO05D008121 4.3e-31 139.4 252 40.1
unitig_52.g17262 Utricularia gibba HOM05D006760 ORTHO05D008121 5.6e-31 139.0 129 57.4
MSTRG.11878 Avicennia marina HOM05D006760 ORTHO05D008121 2.1e-30 137.1 221 43.9
Eucgr.D02586 Eucalyptus grandis HOM05D006760 ORTHO05D008121 8.0e-30 135.2 220 38.6
Glyma.04G123100 Glycine max HOM05D006760 ORTHO05D008121 1.1e-29 134.8 215 39.5
Glyma.09G214700 Glycine max HOM05D006760 ORTHO05D008121 3.1e-29 133.3 224 40.2
VMungo1215G0713 Vigna mungo HOM05D006760 ORTHO05D008121 3.1e-29 133.3 219 41.6
HanXRQChr06g0173431 Helianthus annuus HOM05D006760 ORTHO05D008121 8.9e-29 131.7 173 48.0
Phvul.002G127600 Phaseolus vulgaris HOM05D006760 ORTHO05D008121 2.6e-28 130.2 237 39.7
CiPaw.11G103800 Carya illinoinensis HOM05D006760 ORTHO05D008121 3.4e-28 129.8 213 43.2
FvH4_5g24100 Fragaria vesca HOM05D006760 ORTHO05D008121 9.8e-28 128.3 214 38.8
FAN13G0245 Fragaria x ananassa HOM05D006760 ORTHO05D008121 9.8e-28 128.3 214 38.8
FAN18G0636 Fragaria x ananassa HOM05D006760 ORTHO05D008121 9.8e-28 128.3 214 38.8
FAN18G2939 Fragaria x ananassa HOM05D006760 ORTHO05D008121 9.8e-28 128.3 214 38.8
Atru.chr6.2107 Acer truncatum HOM05D006760 ORTHO05D008121 1.3e-27 127.9 221 38.5
Cfa012614 Carpinus fangiana HOM05D006760 ORTHO05D008121 2.9e-27 126.7 163 48.5
FAN04G2385 Fragaria x ananassa HOM05D006760 ORTHO05D008121 4.9e-27 125.9 141 49.6
CiPaw.12G072300 Carya illinoinensis HOM05D006760 ORTHO05D008121 6.4e-27 125.6 216 42.6
Hund11097 Selenicereus undatus HOM05D006760 ORTHO05D008121 1.1e-26 124.8 181 42.0
AUR62027315 Chenopodium quinoa HOM05D006760 ORTHO05D008121 2.4e-26 123.6 274 36.9
RcHm_v2.0_Chr7g0213631 Rosa chinensis HOM05D006760 ORTHO05D008121 2.4e-26 123.6 130 52.3
vmacro00052 Vaccinium macrocarpon HOM05D006760 ORTHO05D008121 2.4e-26 123.6 136 49.3
CANSAT21G1082 Cannabis sativa HOM05D006760 ORTHO05D008121 9.2e-26 121.7 223 40.4
Lj8C333T3 Lonicera japonica HOM05D006760 ORTHO05D008121 9.2e-26 121.7 128 51.6
HanXRQChr17g0537101 Helianthus annuus HOM05D006760 ORTHO05D008121 1.6e-25 120.9 145 49.0
EL10Ac5g11912 Beta vulgaris HOM05D006760 ORTHO05D008121 4.6e-25 119.4 131 48.9
Prupe.5G019400 Prunus persica HOM05D006760 ORTHO05D008121 4.6e-25 119.4 131 51.1
Lj2g0001135 Lotus japonicus HOM05D006760 ORTHO05D008121 3.0e-24 116.7 246 37.8
Ah.12g056060 Amaranthus hybridus HOM05D006760 ORTHO05D008121 5.1e-24 115.9 140 47.9
Sc22g0002140 Simmondsia chinensis HOM05D006760 ORTHO05D008121 8.6e-24 115.2 221 39.4
Thecc.03G324900 Theobroma cacao HOM05D006760 ORTHO05D008121 1.1e-23 114.8 129 52.7
MD06G1017100 Malus domestica HOM05D006760 ORTHO05D008121 3.3e-23 113.2 237 35.0
PGR067G0006 Punica granatum HOM05D006760 ORTHO05D008121 3.3e-23 113.2 108 54.6
TPR.G17264 Trifolium pratense HOM05D006760 ORTHO05D008121 4.3e-23 112.8 248 36.7
COL.COLO4_37233 Corchorus olitorius HOM05D006760 ORTHO05D008121 1.2e-22 111.3 132 49.2
Ca_25094_v3 Cicer arietinum L. HOM05D006760 ORTHO05D008121 2.8e-22 110.2 132 50.8
Ca_30394_v3 Cicer arietinum L. HOM05D006760 ORTHO05D008121 2.8e-22 110.2 132 50.8
Ciclev10001352m.g Citrus clementina HOM05D006760 ORTHO05D008121 2.8e-22 110.2 129 50.4
CSS0020490 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 3.6e-22 109.8 120 53.3
Gohir.D12G202700 Gossypium hirsutum HOM05D006760 ORTHO05D008121 4.7e-22 109.4 129 49.6
Gorai.008G217700 Gossypium raimondii HOM05D006760 ORTHO05D008121 8.1e-22 108.6 129 49.6
Psat2g143640 Pisum sativum HOM05D006760 ORTHO05D008121 8.1e-22 108.6 145 46.2
Gohir.A12G200000 Gossypium hirsutum HOM05D006760 ORTHO05D008121 1.1e-21 108.2 129 49.6
Duzib205G0742 Durio zibethinus HOM05D006760 ORTHO05D008121 1.4e-21 107.8 152 45.4
Medtr5g026680 Medicago truncatula HOM05D006760 ORTHO05D008121 2.3e-21 107.1 145 46.9
Lalb_Chr05g0229401 Lupinus albus HOM05D006760 ORTHO05D008121 6.8e-21 105.5 134 44.8
Haze_08041 Corylus avellana HOM05D006760 ORTHO05D008121 2.0e-20 104.0 179 42.5
Aa31LG9G15690 Aethionema arabicum HOM05D006760 ORTHO05D008121 2.6e-20 103.6 130 46.2
Haze_08051 Corylus avellana HOM05D006760 ORTHO05D008121 3.4e-20 103.2 163 43.6
THA.LOC104798519 Tarenaya hassleriana HOM05D006760 ORTHO05D008121 3.4e-20 103.2 148 41.2
Cpa.g.c37635 Carica papaya HOM05D006760 ORTHO05D008121 1.4e-18 97.8 83 62.7
AL5G24580 Arabidopsis lyrata HOM05D006760 ORTHO05D008121 5.4e-18 95.9 130 46.2
arahy.Tifrunner.gnm1.ann1.WT3CQ0 Arachis hypogaea HOM05D006760 ORTHO05D008121 1.2e-17 94.7 130 46.9
arahy.Tifrunner.gnm1.ann1.Z5DNFJ Arachis hypogaea HOM05D006760 ORTHO05D008121 1.2e-17 94.7 130 46.9
ATR0829G077 Amborella trichopoda HOM05D006760 ORTHO05D008121 2.7e-17 93.6 187 34.2
AT3G45900 Arabidopsis thaliana HOM05D006760 ORTHO05D008121 4.6e-17 92.8 130 45.4
Carub.0005s1175 Capsella rubella HOM05D006760 ORTHO05D008121 4.6e-17 92.8 130 43.8
Lalb_Chr16g0380681 Lupinus albus HOM05D006760 ORTHO05D008121 4.6e-17 92.8 126 43.7
Thhalv10002556m.g Eutrema salsugineum HOM05D006760 ORTHO05D008121 7.8e-17 92.0 130 44.6
Sp5g15640 Schrenkiella parvula HOM05D006760 ORTHO05D008121 1.3e-16 91.3 130 44.6
CARHR154260 Cardamine hirsuta HOM05D006760 ORTHO05D008121 1.7e-16 90.9 130 43.8
Zm00001eb064790 Zea mays HOM05D006760 ORTHO05D008121 3.9e-16 89.7 173 36.4
BcaB01g01049 Brassica carinata HOM05D006760 ORTHO05D008121 2.1e-14 84.0 131 41.2
BraA06t25205Z Brassica rapa HOM05D006760 ORTHO05D008121 2.4e-13 80.5 141 40.4
A06p21180 Brassica napus HOM05D006760 ORTHO05D008121 3.1e-13 80.1 141 39.7
Os03g0853600 Oryza sativa ssp. japonica HOM05D006760 ORTHO05D008121 5.2e-13 79.3 138 39.1
BcaC01g01943 Brassica carinata HOM05D006760 ORTHO05D008121 8.9e-13 78.6 85 49.4
C03p70350 Brassica napus HOM05D006760 ORTHO05D008121 8.9e-13 78.6 85 49.4
BolC3t19291H Brassica oleracea HOM05D006760 ORTHO05D008121 8.9e-13 78.6 85 49.4
C01p33620 Brassica napus HOM05D006760 ORTHO05D008121 3.2e-10 70.1 88 43.2
MBI03_g18481_MAGBIO Magnolia biondii HOM05D018637 ORTHO05D012924 1.2e-09 68.2 136 39.0
PGR031G0562 Punica granatum HOM05D006760 ORTHO05D008121 3.0e-08 63.5 51 60.8
Dinv30680 Davidia involucrata HOM05D006760 ORTHO05D008121 1.3e-06 58.2 60 51.7
HanXRQChr04g0100481 Helianthus annuus HOM05D005525 ORTHO05D006341 3.6e-06 56.6 124 32.3


User provided reference genes

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