Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3410 Ceratophyllum demersum HOM05D007342 ORTHO05D009252 3.1e-277 958.0 541 100.0
MBI18_g13693_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 1.7e-41 174.9 636 27.7
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 8.0e-39 166.0 411 34.3
Prupe.1G135700 Prunus persica HOM05D007342 ORTHO05D009252 1.4e-38 165.2 552 31.0
Haze_01197 Corylus avellana HOM05D007342 ORTHO05D009252 1.2e-37 162.2 418 32.8
Nn4g25834 Nelumbo nucifera HOM05D007342 ORTHO05D009252 2.0e-37 161.4 464 31.0
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 5.7e-37 159.8 536 30.4
TAR633G2120 Trochodendron aralioides HOM05D007342 ORTHO05D009252 4.8e-36 156.8 277 39.7
Gohir.D09G239700 Gossypium hirsutum HOM05D007342 ORTHO05D009252 1.1e-35 155.6 395 32.2
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 1.1e-35 155.6 563 29.5
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 1.8e-35 154.8 564 28.5
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 2.4e-35 154.5 580 29.1
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 3.1e-35 154.1 613 26.3
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 3.1e-35 154.1 586 29.9
CANSAT78G2360 Cannabis sativa HOM05D007342 ORTHO05D009252 5.9e-34 149.8 578 28.2
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 1.0e-33 149.1 574 29.1
ClCG06G005120 Citrullus lanatus HOM05D007342 ORTHO05D009252 2.2e-33 147.9 589 27.3
Cc03_g01870 Coffea canephora HOM05D007342 ORTHO05D009252 2.9e-33 147.5 209 42.1
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 6.5e-33 146.4 541 28.8
MD13G1168100 Malus domestica HOM05D007342 ORTHO05D009252 8.5e-33 146.0 576 29.2
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 1.1e-32 145.6 540 27.8
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 1.5e-32 145.2 549 27.9
FvH4_4g18220 Fragaria vesca HOM05D007342 ORTHO05D009252 3.2e-32 144.1 559 29.2
FAN12G3549 Fragaria x ananassa HOM05D007342 ORTHO05D009252 3.2e-32 144.1 559 29.2
Potri.008G222000 Populus trichocarpa HOM05D007342 ORTHO05D009252 4.2e-32 143.7 554 28.9
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 7.2e-32 142.9 597 27.1
FAN12G0202 Fragaria x ananassa HOM05D007342 ORTHO05D009252 9.4e-32 142.5 559 29.0
MBI18_g13694_MAGBIO Magnolia biondii HOM05D007342 ORTHO05D009252 1.6e-31 141.7 717 25.0
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 1.6e-31 141.7 518 28.4
Nitab4.5_0000059g0470 Nicotiana tabacum HOM05D007342 ORTHO05D009252 8.0e-31 139.4 525 29.5
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 8.0e-31 139.4 520 29.6
Ciclev10004639m.g Citrus clementina HOM05D007342 ORTHO05D009252 1.8e-30 138.3 562 28.3
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 1.8e-30 138.3 511 28.2
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 2.3e-30 137.9 589 28.4
MELO3C021329.2 Cucumis melo HOM05D007342 ORTHO05D009252 3.0e-30 137.5 428 29.9
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 4.0e-30 137.1 558 28.5
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 6.8e-30 136.3 550 28.5
Eucgr.B01323 Eucalyptus grandis HOM05D007342 ORTHO05D009252 8.8e-30 136.0 560 28.2
PGR031G1889 Punica granatum HOM05D007342 ORTHO05D009252 2.6e-29 134.4 592 27.4
THA.LOC104820266 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 4.4e-29 133.7 546 27.1
ECA240G4261 Erigeron canadensis HOM05D007342 ORTHO05D009252 5.7e-29 133.3 418 30.4
Sabra08G0152900 Salix brachista HOM05D007342 ORTHO05D009252 2.2e-28 131.3 579 27.1
SalBow2G3523 Salvia bowleyana HOM05D007342 ORTHO05D009252 3.7e-28 130.6 386 30.8
Oeu045723.1 Olea europaea HOM05D007342 ORTHO05D009252 6.3e-28 129.8 252 35.3
Rhsim02G0008900 Rhododendron simsii HOM05D007342 ORTHO05D009252 6.3e-28 129.8 117 56.4
CiPaw.01G148300 Carya illinoinensis HOM05D007342 ORTHO05D009252 1.1e-27 129.0 417 29.7
PSO832G2203 Papaver somniferum HOM05D007342 ORTHO05D009252 1.4e-27 128.6 120 56.7
SEGI_31295 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 5.4e-27 126.7 321 26.5
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 9.1e-27 125.9 120 55.8
DCAR_023285 Daucus carota HOM05D007342 ORTHO05D009252 9.1e-27 125.9 550 27.5
Lj4g0010877 Lotus japonicus HOM05D007342 ORTHO05D009252 1.6e-26 125.2 136 50.0
AL7G39470 Arabidopsis lyrata HOM05D007342 ORTHO05D009252 5.9e-26 123.2 545 26.6
Lsat_1_v5_gn_5_56841 Lactuca sativa HOM05D007342 ORTHO05D009252 5.9e-26 123.2 562 29.4
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 5.9e-26 123.2 491 27.7
SGA_v2.0_scaffold67G22631 Striga asiatica HOM05D007342 ORTHO05D009252 5.9e-26 123.2 558 25.6
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 7.7e-26 122.9 612 26.5
THA.LOC104820268 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 7.7e-26 122.9 162 43.2
Carub.0007s2583 Capsella rubella HOM05D007342 ORTHO05D009252 1.0e-25 122.5 547 26.7
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 1.7e-25 121.7 614 26.2
Lalb_Chr12g0196601 Lupinus albus HOM05D007342 ORTHO05D009252 2.9e-25 120.9 165 40.0
ATR0796G152 Amborella trichopoda HOM05D007342 ORTHO05D009252 3.8e-25 120.6 115 53.9
Migut.G00157 Erythranthe guttata HOM05D007342 ORTHO05D009252 5.0e-25 120.2 538 25.5
Aa31LG10G6280 Aethionema arabicum HOM05D007342 ORTHO05D009252 6.6e-25 119.8 249 35.3
CARHR290340 Cardamine hirsuta HOM05D007342 ORTHO05D009252 6.6e-25 119.8 424 29.7
unitig_37.g12398 Utricularia gibba HOM05D007342 ORTHO05D009252 8.6e-25 119.4 572 26.2
Glyma.07G247200 Glycine max HOM05D007342 ORTHO05D009252 1.5e-24 118.6 548 27.2
Phvul.003G105800 Phaseolus vulgaris HOM05D007342 ORTHO05D009252 2.5e-24 117.9 159 40.9
Thhalv10025032m.g Eutrema salsugineum HOM05D007342 ORTHO05D009252 3.3e-24 117.5 379 29.0
Lalb_Chr07g0177731 Lupinus albus HOM05D007342 ORTHO05D009252 5.5e-24 116.7 141 45.4
BcaC06g32967 Brassica carinata HOM05D007342 ORTHO05D009252 7.2e-24 116.3 123 48.0
CSS0019788 Camellia sinensis var. sinensis HOM05D007342 ORTHO05D009252 9.5e-24 115.9 539 27.6
AT4G15820 Arabidopsis thaliana HOM05D007342 ORTHO05D009252 2.1e-23 114.8 388 29.1
Sp7g14200 Schrenkiella parvula HOM05D007342 ORTHO05D009252 2.1e-23 114.8 391 28.1
A03p49350 Brassica napus HOM05D007342 ORTHO05D009252 2.8e-23 114.4 123 47.2
BraA03t14036Z Brassica rapa HOM05D007342 ORTHO05D009252 3.6e-23 114.0 123 47.2
Psat4g027440 Pisum sativum HOM05D007342 ORTHO05D009252 3.6e-23 114.0 125 50.4
arahy.Tifrunner.gnm1.ann1.4CZB08 Arachis hypogaea HOM05D007342 ORTHO05D009252 6.1e-23 113.2 194 37.6
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 8.0e-23 112.8 150 42.7
Manes.03G195600 Manihot esculenta HOM05D007342 ORTHO05D009252 1.0e-22 112.5 540 28.0
VMungo1215G0467 Vigna mungo HOM05D005283 ORTHO05D006769 1.8e-22 111.7 254 32.3
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 5.2e-22 110.2 621 23.5
vmacro15234 Vaccinium macrocarpon HOM05D007342 ORTHO05D009252 1.2e-21 109.0 541 26.8
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 2.0e-21 108.2 359 30.1
AUR62020686 Chenopodium quinoa HOM05D007342 ORTHO05D009252 5.7e-21 106.7 175 38.9
Medtr4g119920 Medicago truncatula HOM05D007342 ORTHO05D009252 7.5e-21 106.3 569 27.1
BcaC06g33445 Brassica carinata HOM05D007342 ORTHO05D009252 1.3e-20 105.5 521 24.4
C07p47420 Brassica napus HOM05D007342 ORTHO05D009252 1.3e-20 105.5 521 24.4
BolC7t45269H Brassica oleracea HOM05D007342 ORTHO05D009252 1.3e-20 105.5 521 24.4
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 1.3e-20 105.5 569 25.7
Glyma.17G026800 Glycine max HOM05D007342 ORTHO05D009252 1.7e-20 105.1 558 26.3
TPR.G3194 Trifolium pratense HOM05D007342 ORTHO05D009252 2.2e-20 104.8 565 26.0
Atru.chr4.2846 Acer truncatum HOM05D007342 ORTHO05D009252 6.3e-20 103.2 393 27.2
arahy.Tifrunner.gnm1.ann1.0PW7WM Arachis hypogaea HOM05D007342 ORTHO05D009252 8.3e-20 102.8 591 24.7
THA.LOC104810667 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 1.4e-19 102.1 98 54.1
THA.LOC104820435 Tarenaya hassleriana HOM05D007342 ORTHO05D009252 7.0e-19 99.8 98 53.1
DCAR_023500 Daucus carota HOM05D007342 ORTHO05D009252 1.7e-17 95.1 124 44.4
HPP92_016942 Vanilla planifolia HOM05D007342 ORTHO05D009252 3.3e-16 90.9 165 37.0
Ca_21491_v3 Cicer arietinum L. HOM05D005283 ORTHO05D006769 4.0e-14 84.0 587 25.2
AagrBONN_evm.TU.Sc2ySwM_368.2853 Anthoceros agrestis HOM05D005676 ORTHO05D007375 2.2e-12 78.2 69 42.0
Pp3c12_1870 Physcomitrium patens HOM05D005676 ORTHO05D007375 2.9e-12 77.8 201 33.3
Mapoly0008s0022 Marchantia polymorpha HOM05D005676 ORTHO05D007375 7.0e-11 73.2 64 42.2
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.0e-09 69.3 399 18.3
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 1.3e-09 68.9 180 27.8
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 1.7e-09 68.6 180 28.9
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 2.3e-09 68.2 119 31.9
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 2.3e-09 68.2 183 27.3
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.3e-09 68.2 183 27.3
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.3e-09 68.2 183 27.3
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.3e-09 68.2 183 27.3
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 2.3e-09 68.2 183 27.3
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 3.0e-09 67.8 182 28.0
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 3.0e-09 67.8 130 30.0
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 3.9e-09 67.4 183 27.3
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 8.6e-09 66.2 375 20.3
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 1.1e-08 65.9 119 31.1
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 1.9e-08 65.1 105 30.5
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 1.9e-08 65.1 144 27.1
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 1.9e-08 65.1 397 20.7
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 2.5e-08 64.7 221 24.0
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 3.3e-08 64.3 128 28.9
SEGI_23777 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 3.3e-08 64.3 110 33.6
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 4.3e-08 63.9 181 26.5
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 4.3e-08 63.9 181 26.5
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 4.3e-08 63.9 189 29.1
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 4.3e-08 63.9 179 25.7
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 5.6e-08 63.5 186 26.9
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 5.6e-08 63.5 121 32.2
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 5.6e-08 63.5 378 19.8
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 9.5e-08 62.8 117 29.9
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 9.5e-08 62.8 181 26.5
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 9.5e-08 62.8 210 25.7
Gohir.D11G101600 Gossypium hirsutum HOM05D005676 ORTHO05D007375 9.5e-08 62.8 86 33.7
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 9.5e-08 62.8 119 31.1
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 9.5e-08 62.8 113 31.0
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 9.5e-08 62.8 120 30.0
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 9.5e-08 62.8 185 27.6
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 1.2e-07 62.4 210 25.7
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 1.2e-07 62.4 179 26.3
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 1.6e-07 62.0 208 25.5
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 1.6e-07 62.0 208 25.5
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 2.1e-07 61.6 117 30.8
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 2.1e-07 61.6 119 27.7
SEGI_23790 Sequoiadendron giganteum HOM05D005676 ORTHO05D007375 2.1e-07 61.6 64 35.9
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 2.8e-07 61.2 180 26.1
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 2.8e-07 61.2 110 34.5
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 2.8e-07 61.2 88 31.8
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 2.8e-07 61.2 121 28.1
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 2.8e-07 61.2 211 24.6
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 3.6e-07 60.8 189 26.5
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 4.7e-07 60.5 181 26.0
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 4.7e-07 60.5 121 28.1
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 4.7e-07 60.5 181 25.4
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 6.2e-07 60.1 109 31.2
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 6.2e-07 60.1 87 29.9
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 6.2e-07 60.1 180 23.9
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 8.0e-07 59.7 106 33.0
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 8.0e-07 59.7 119 30.3
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 1.1e-06 59.3 261 22.6
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 1.4e-06 58.9 180 25.0
AL5G43810 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 1.4e-06 58.9 297 20.2
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.4e-06 58.9 185 24.9
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 1.4e-06 58.9 119 27.7
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 1.4e-06 58.9 189 25.9
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 1.8e-06 58.5 137 28.5
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 1.8e-06 58.5 187 25.1
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 1.8e-06 58.5 189 27.5
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 1.8e-06 58.5 184 25.5
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 2.3e-06 58.2 115 31.3
ATR0602G016 Amborella trichopoda HOM05D005676 ORTHO05D007375 3.1e-06 57.8 84 32.1
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 3.1e-06 57.8 560 18.8
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 3.1e-06 57.8 180 25.6
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 3.1e-06 57.8 215 23.3
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 4.0e-06 57.4 406 18.2
MD07G1150200 Malus domestica HOM05D005676 ORTHO05D007375 4.0e-06 57.4 65 38.5
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 4.0e-06 57.4 181 24.9
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 5.2e-06 57.0 130 29.2
CARHR172110 Cardamine hirsuta HOM05D005676 ORTHO05D007375 5.2e-06 57.0 267 23.6
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 5.2e-06 57.0 177 27.1
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 5.2e-06 57.0 82 35.4
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 6.8e-06 56.6 126 29.4
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 6.8e-06 56.6 116 31.0
Cpa.g.sc96.24 Carica papaya HOM05D005676 ORTHO05D007375 8.9e-06 56.2 87 32.2
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 8.9e-06 56.2 180 24.4


User provided reference genes

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