Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3402 Ceratophyllum demersum HOM05D002103 ORTHO05D004020 6.0e-74 280.8 145 100.0
TAR625G1123 Trochodendron aralioides HOM05D002103 ORTHO05D004020 3.7e-23 112.1 133 47.4
MBI02_g17341_MAGBIO Magnolia biondii HOM05D002103 ORTHO05D004020 3.1e-22 109.0 143 45.5
GSVIVG01009523001 Vitis vinifera HOM05D002103 ORTHO05D004020 2.0e-21 106.3 133 45.1
Cfa018527 Carpinus fangiana HOM05D002103 ORTHO05D004020 2.2e-20 102.8 125 47.2
Nn1g05835 Nelumbo nucifera HOM05D002103 ORTHO05D004020 2.2e-20 102.8 133 43.6
Ah.05g168830 Amaranthus hybridus HOM05D002103 ORTHO05D004020 3.8e-20 102.1 135 40.7
Prupe.1G438400 Prunus persica HOM05D002103 ORTHO05D004020 3.8e-20 102.1 136 44.9
Sabra02G0100000 Salix brachista HOM05D002103 ORTHO05D004020 6.5e-20 101.3 131 43.5
EL10Ac1g01784 Beta vulgaris HOM05D002103 ORTHO05D004020 1.4e-19 100.1 133 44.4
CiPaw.16G045800 Carya illinoinensis HOM05D002103 ORTHO05D004020 1.9e-19 99.8 123 48.0
Dinv39328 Davidia involucrata HOM05D002103 ORTHO05D004020 1.9e-19 99.8 133 44.4
Actinidia23265 Actinidia chinensis HOM05D002103 ORTHO05D004020 3.2e-19 99.0 136 41.9
PGR083G1022 Punica granatum HOM05D002103 ORTHO05D004020 3.2e-19 99.0 134 46.3
Cpa.g.sc49.1 Carica papaya HOM05D002103 ORTHO05D004020 4.2e-19 98.6 136 41.2
Dinv35973 Davidia involucrata HOM05D002103 ORTHO05D004020 7.1e-19 97.8 133 41.4
QL02p005375 Quercus lobata HOM05D002103 ORTHO05D004020 7.1e-19 97.8 118 47.5
TAR381G0883 Trochodendron aralioides HOM05D002103 ORTHO05D004020 9.3e-19 97.4 133 43.6
FAN20G2977 Fragaria x ananassa HOM05D002103 ORTHO05D004020 1.2e-18 97.1 140 42.1
MD08G1103400 Malus domestica HOM05D002103 ORTHO05D004020 1.2e-18 97.1 130 43.1
TWI56G0490 Tripterygium wilfordii HOM05D002103 ORTHO05D004020 1.2e-18 97.1 135 45.9
Atru.chr13.650 Acer truncatum HOM05D002103 ORTHO05D004020 1.6e-18 96.7 131 42.7
FvH4_2g34620 Fragaria vesca HOM05D002103 ORTHO05D004020 1.6e-18 96.7 134 43.3
FAN15G2894 Fragaria x ananassa HOM05D002103 ORTHO05D004020 1.6e-18 96.7 134 43.3
Ciclev10001804m.g Citrus clementina HOM05D002103 ORTHO05D004020 2.7e-18 95.9 136 39.7
Nn5g30229 Nelumbo nucifera HOM05D002103 ORTHO05D004020 3.5e-18 95.5 134 42.5
Gorai.010G018100 Gossypium raimondii HOM05D002103 ORTHO05D004020 4.6e-18 95.1 119 42.9
Aqoxy6G01360 Aquilegia oxysepala HOM05D002103 ORTHO05D004020 7.9e-18 94.4 128 40.6
FAN27G3124 Fragaria x ananassa HOM05D002103 ORTHO05D004020 1.0e-17 94.0 140 41.4
MD15G1084700 Malus domestica HOM05D002103 ORTHO05D004020 1.0e-17 94.0 131 42.7
SGA_v2.0_scaffold14G07034 Striga asiatica HOM05D002103 ORTHO05D004020 1.0e-17 94.0 133 41.4
CiPaw.15G061600 Carya illinoinensis HOM05D002103 ORTHO05D004020 1.3e-17 93.6 126 42.9
Manes.05G171920 Manihot esculenta HOM05D002103 ORTHO05D004020 1.8e-17 93.2 123 41.5
Manes.05G171940 Manihot esculenta HOM05D002103 ORTHO05D004020 1.8e-17 93.2 123 41.5
Manes.05G172000 Manihot esculenta HOM05D002103 ORTHO05D004020 1.8e-17 93.2 123 41.5
Potri.014G031900 Populus trichocarpa HOM05D002103 ORTHO05D004020 1.8e-17 93.2 124 41.1
Duzib093G0320 Durio zibethinus HOM05D002103 ORTHO05D004020 2.3e-17 92.8 118 43.2
CANSAT01G2416 Cannabis sativa HOM05D002103 ORTHO05D004020 3.0e-17 92.4 135 42.2
MELO3C010883.2 Cucumis melo HOM05D002103 ORTHO05D004020 3.9e-17 92.0 135 45.2
Gohir.D06G015300 Gossypium hirsutum HOM05D002103 ORTHO05D004020 3.9e-17 92.0 118 42.4
CsaV3_2G028030 Cucumis sativus L. HOM05D002103 ORTHO05D004020 5.1e-17 91.7 135 45.9
Thecc.08G010900 Theobroma cacao HOM05D002103 ORTHO05D004020 5.1e-17 91.7 118 41.5
CAN.G371.35 Capsicum annuum HOM05D002103 ORTHO05D004020 6.7e-17 91.3 129 41.9
Cc10_g04320 Coffea canephora HOM05D002103 ORTHO05D004020 8.7e-17 90.9 144 38.9
Gohir.A06G017200 Gossypium hirsutum HOM05D002103 ORTHO05D004020 8.7e-17 90.9 118 41.5
RcHm_v2.0_Chr6g0307681 Rosa chinensis HOM05D002103 ORTHO05D004020 1.1e-16 90.5 134 40.3
PGSC0003DMG400007986 Solanum tuberosum HOM05D002103 ORTHO05D004020 1.1e-16 90.5 129 40.3
TWI36G1154 Tripterygium wilfordii HOM05D002103 ORTHO05D004020 1.1e-16 90.5 137 43.1
Manes.18G032500 Manihot esculenta HOM05D002103 ORTHO05D004020 1.5e-16 90.1 119 40.3
vmacro21537 Vaccinium macrocarpon HOM05D002103 ORTHO05D004020 1.9e-16 89.7 138 39.9
Oeu009550.1 Olea europaea HOM05D002103 ORTHO05D004020 2.5e-16 89.4 137 39.4
AUR62039305 Chenopodium quinoa HOM05D002103 ORTHO05D004020 3.3e-16 89.0 135 40.0
COL.COLO4_26478 Corchorus olitorius HOM05D002103 ORTHO05D004020 3.3e-16 89.0 118 40.7
CSS0022390 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D004020 4.3e-16 88.6 129 40.3
Peaxi162Scf00528g00417 Petunia axillaris HOM05D002103 ORTHO05D004020 4.3e-16 88.6 126 41.3
Gorai.002G131200 Gossypium raimondii HOM05D002103 ORTHO05D004020 7.4e-16 87.8 119 42.9
AUR62022429 Chenopodium quinoa HOM05D002103 ORTHO05D004020 1.3e-15 87.0 135 40.0
HanXRQChr02g0037661 Helianthus annuus HOM05D002103 ORTHO05D004020 2.2e-15 86.3 119 39.5
Hma1.2p1_0982F.1_g243900 Hydrangea macrophylla HOM05D002103 ORTHO05D004020 2.2e-15 86.3 134 39.6
Sed0003893 Sechium edule HOM05D002103 ORTHO05D004020 2.2e-15 86.3 135 43.0
Migut.N02702 Erythranthe guttata HOM05D002103 ORTHO05D004020 2.8e-15 85.9 133 38.3
Gohir.D01G106900 Gossypium hirsutum HOM05D002103 ORTHO05D004020 3.7e-15 85.5 119 42.0
Duzib041G0561 Durio zibethinus HOM05D002103 ORTHO05D004020 4.8e-15 85.1 118 40.7
CAN.G52.6 Capsicum annuum HOM05D002103 ORTHO05D004020 8.2e-15 84.3 123 42.3
Peaxi162Scf00929g00314 Petunia axillaris HOM05D002103 ORTHO05D004020 8.2e-15 84.3 125 40.0
Gohir.A01G118700 Gossypium hirsutum HOM05D002103 ORTHO05D004020 1.1e-14 84.0 119 42.0
Lsat_1_v5_gn_1_20261 Lactuca sativa HOM05D002103 ORTHO05D004020 1.4e-14 83.6 114 39.5
Phvul.001G021000 Phaseolus vulgaris HOM05D002103 ORTHO05D004020 1.8e-14 83.2 128 39.8
VMungo1309G0516 Vigna mungo HOM05D002103 ORTHO05D004020 1.8e-14 83.2 123 40.7
MSTRG.24326 Avicennia marina HOM05D002103 ORTHO05D004020 4.1e-14 82.0 133 37.6
Eucgr.F00240 Eucalyptus grandis HOM05D002103 ORTHO05D004020 4.1e-14 82.0 118 38.1
DCAR_019463 Daucus carota HOM05D002103 ORTHO05D004020 5.3e-14 81.6 137 37.2
Nitab4.5_0001024g0010 Nicotiana tabacum HOM05D002103 ORTHO05D004020 6.9e-14 81.3 122 37.7
Phvul.009G063800 Phaseolus vulgaris HOM05D002103 ORTHO05D004020 6.9e-14 81.3 128 38.3
Sed0011304 Sechium edule HOM05D002103 ORTHO05D004020 6.9e-14 81.3 135 40.0
Lalb_Chr23g0266991 Lupinus albus HOM05D002103 ORTHO05D004020 9.0e-14 80.9 126 38.9
Prupe.3G111800 Prunus persica HOM05D002103 ORTHO05D004020 1.2e-13 80.5 116 42.2
VMungo0647G0899 Vigna mungo HOM05D002103 ORTHO05D004020 1.2e-13 80.5 130 38.5
Nitab4.5_0000686g0060 Nicotiana tabacum HOM05D002103 ORTHO05D004020 1.5e-13 80.1 127 41.7
Glyma.06G038500 Glycine max HOM05D002103 ORTHO05D004020 2.6e-13 79.3 123 39.0
ATR0100G056 Amborella trichopoda HOM05D002103 ORTHO05D004020 7.7e-13 77.8 125 37.6
Nitab4.5_0001101g0080 Nicotiana tabacum HOM05D002103 ORTHO05D004020 1.0e-12 77.4 125 38.4
ClCG08G015730 Citrullus lanatus HOM05D002103 ORTHO05D004020 2.2e-12 76.3 90 50.0
Glyma.04G037600 Glycine max HOM05D002103 ORTHO05D004020 5.0e-12 75.1 115 40.0
Lalb_Chr14g0368771 Lupinus albus HOM05D002103 ORTHO05D004020 5.0e-12 75.1 121 38.0
Lj5g0018432 Lotus japonicus HOM05D002103 ORTHO05D004020 1.4e-11 73.6 131 35.1
PSO541G4087 Papaver somniferum HOM05D002103 ORTHO05D004020 1.4e-11 73.6 81 45.7
PSO675G6562 Papaver somniferum HOM05D002103 ORTHO05D004020 1.4e-11 73.6 81 45.7
arahy.Tifrunner.gnm1.ann1.75Q1P4 Arachis hypogaea HOM05D002103 ORTHO05D004020 1.9e-11 73.2 108 38.0
arahy.Tifrunner.gnm1.ann1.Z2DAXP Arachis hypogaea HOM05D002103 ORTHO05D004020 1.9e-11 73.2 108 38.0
Psat6g012640 Pisum sativum HOM05D002103 ORTHO05D004020 1.9e-11 73.2 133 36.8
SalBow7G3772 Salvia bowleyana HOM05D002103 ORTHO05D004020 3.2e-11 72.4 132 37.9
Sopen07g013400 Solanum pennellii HOM05D002103 ORTHO05D004020 4.2e-11 72.0 133 35.3
Lalb_Chr22g0355191 Lupinus albus HOM05D002103 ORTHO05D004020 5.5e-11 71.6 120 35.8
Medtr1g019780 Medicago truncatula HOM05D002103 ORTHO05D004020 7.2e-11 71.2 134 35.1
CARHR241420 Cardamine hirsuta HOM05D002103 ORTHO05D004020 9.4e-11 70.9 124 34.7
TPR.G13687 Trifolium pratense HOM05D002103 ORTHO05D004020 1.6e-10 70.1 134 34.3
Glyma.17G243300 Glycine max HOM05D002103 ORTHO05D004020 2.1e-10 69.7 133 35.3
BcaC09g52142 Brassica carinata HOM05D002103 ORTHO05D004020 2.7e-10 69.3 114 35.1
Sp7g31080 Schrenkiella parvula HOM05D002103 ORTHO05D004020 3.6e-10 68.9 115 34.8
BraA01t00472Z Brassica rapa HOM05D002198 ORTHO05D004020 4.6e-10 68.6 115 34.8
A01p04900 Brassica napus HOM05D002198 ORTHO05D004020 6.1e-10 68.2 115 34.8
BcaC09g52145 Brassica carinata HOM05D002103 ORTHO05D004020 1.0e-09 67.4 115 34.8
BolC1t00510H Brassica oleracea HOM05D002103 ORTHO05D004020 1.0e-09 67.4 115 34.8
SEGI_28946 Sequoiadendron giganteum HOM05D002103 ORTHO05D004020 1.8e-09 66.6 130 33.8
THA.LOC104803681 Tarenaya hassleriana HOM05D002103 ORTHO05D004020 1.8e-09 66.6 120 34.2
BcaB03g12802 Brassica carinata HOM05D002103 ORTHO05D004020 3.0e-09 65.9 115 34.8
Carub.0007s0711 Capsella rubella HOM05D002103 ORTHO05D004020 3.9e-09 65.5 114 34.2
AL7G18190 Arabidopsis lyrata HOM05D002103 ORTHO05D004020 6.7e-09 64.7 119 32.8
A08p17650 Brassica napus HOM05D002103 ORTHO05D004020 8.8e-09 64.3 115 33.9
BraA08t33716Z Brassica rapa HOM05D002103 ORTHO05D004020 8.8e-09 64.3 115 33.9
Medtr3g101480 Medicago truncatula HOM05D002103 ORTHO05D004020 8.8e-09 64.3 113 36.3
Glyma.14G082000 Glycine max HOM05D002103 ORTHO05D004020 1.1e-08 63.9 115 34.8
Thhalv10025691m.g Eutrema salsugineum HOM05D002103 ORTHO05D004020 1.5e-08 63.5 119 32.8
TPR.G35873 Trifolium pratense HOM05D002103 ORTHO05D004020 1.5e-08 63.5 109 36.7
BcaC01g00993 Brassica carinata HOM05D002103 ORTHO05D004020 2.0e-08 63.2 115 33.9
C03p86710 Brassica napus HOM05D002103 ORTHO05D004020 2.0e-08 63.2 115 33.9
BolC3t20967H Brassica oleracea HOM05D002103 ORTHO05D004020 2.0e-08 63.2 115 33.9
Psat0s3123g0080 Pisum sativum HOM05D002103 ORTHO05D004020 2.0e-08 63.2 123 36.6
RcHm_v2.0_Chr6g0307521 Rosa chinensis HOM05D002103 ORTHO05D004020 3.3e-08 62.4 124 34.7
HPP92_027223 Vanilla planifolia HOM05D002103 ORTHO05D004020 1.3e-07 60.5 120 40.8
CSS0022665 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D004020 1.7e-07 60.1 129 29.5
AT4G33380 Arabidopsis thaliana HOM05D002103 ORTHO05D004020 2.8e-07 59.3 119 31.9
Os02g0761600 Oryza sativa ssp. japonica HOM05D002103 ORTHO05D004020 2.8e-07 59.3 128 35.2
Potri.002G127700 Populus trichocarpa HOM05D002103 ORTHO05D004020 3.7e-07 58.9 74 39.2
SMO144G0051 Selaginella moellendorffii HOM05D002103 ORTHO05D007786 3.7e-07 58.9 124 29.0
BolC3t20965H Brassica oleracea HOM05D002103 ORTHO05D004020 4.8e-07 58.5 115 32.2
CSS0001953 Camellia sinensis var. sinensis HOM05D002103 ORTHO05D004020 4.8e-07 58.5 129 31.0
Solyc04g079160.4 Solanum lycopersicum HOM05D002103 ORTHO05D004020 1.8e-06 56.6 67 43.3
Os06g0214100 Oryza sativa ssp. japonica HOM05D002103 ORTHO05D004020 6.9e-06 54.7 126 30.2


User provided reference genes

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