Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3386 Ceratophyllum demersum HOM05D006067 ORTHO05D007327 2.6e-164 582.0 303 100.0
CDE09G1032 Ceratophyllum demersum HOM05D001990 ORTHO05D002033 2.9e-107 392.5 240 88.3
Nn1g04444 Nelumbo nucifera HOM05D006067 ORTHO05D007327 1.3e-41 174.5 301 36.5
MBI07_g09563_MAGBIO Magnolia biondii HOM05D006067 ORTHO05D007327 3.7e-41 172.9 303 37.3
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 9.0e-40 168.3 274 40.5
Cc05_g11060 Coffea canephora HOM05D006067 ORTHO05D007327 2.0e-39 167.2 273 41.0
Potri.011G109600 Populus trichocarpa HOM05D006067 ORTHO05D007327 3.4e-39 166.4 317 33.8
vmacro09492 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 3.2e-37 159.8 255 39.6
Atru.chr2.2107 Acer truncatum HOM05D006067 ORTHO05D007327 1.2e-36 157.9 238 39.9
vmacro11942 Vaccinium macrocarpon HOM05D006067 ORTHO05D007327 2.7e-36 156.8 256 38.7
ClCG11G017430 Citrullus lanatus HOM05D006067 ORTHO05D007327 3.0e-35 153.3 310 36.1
Sabra11G0096900 Salix brachista HOM05D006067 ORTHO05D007327 3.0e-35 153.3 293 33.1
EL10Ac4g08347 Beta vulgaris HOM05D006067 ORTHO05D007327 3.9e-35 152.9 302 39.1
Sed0004545 Sechium edule HOM05D006067 ORTHO05D007327 5.1e-35 152.5 306 37.3
TAR624G0749 Trochodendron aralioides HOM05D006067 ORTHO05D007327 1.9e-34 150.6 324 33.6
CSS0028289 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 3.3e-34 149.8 248 35.1
CsaV3_4G033090 Cucumis sativus L. HOM05D006067 ORTHO05D007327 3.3e-34 149.8 317 36.6
Peaxi162Scf00692g00416 Petunia axillaris HOM05D006067 ORTHO05D007327 2.1e-33 147.1 248 37.9
Solyc10g007340.3 Solanum lycopersicum HOM05D006067 ORTHO05D007327 2.1e-33 147.1 309 35.0
GSVIVG01014195001 Vitis vinifera HOM05D006067 ORTHO05D007327 2.1e-33 147.1 312 37.8
Rhsim06G0208300 Rhododendron simsii HOM05D006067 ORTHO05D007327 2.8e-33 146.7 255 34.9
Thecc.07G117200 Theobroma cacao HOM05D006067 ORTHO05D007327 1.4e-32 144.4 295 39.3
Gohir.D01G042720 Gossypium hirsutum HOM05D006067 ORTHO05D007327 2.4e-32 143.7 288 38.9
Gorai.002G054500 Gossypium raimondii HOM05D006067 ORTHO05D007327 2.4e-32 143.7 288 38.9
Sabra16G0255800 Salix brachista HOM05D006067 ORTHO05D007327 5.3e-32 142.5 280 33.2
MELO3C025643.2 Cucumis melo HOM05D006067 ORTHO05D007327 9.0e-32 141.7 326 35.3
Gohir.A01G054200 Gossypium hirsutum HOM05D006067 ORTHO05D007327 9.0e-32 141.7 291 37.8
Aa31LG4G2200 Aethionema arabicum HOM05D006067 ORTHO05D007327 1.2e-31 141.4 259 34.0
Migut.M00726 Erythranthe guttata HOM05D006067 ORTHO05D007327 1.2e-31 141.4 304 36.2
Aqoxy4G00317 Aquilegia oxysepala HOM05D006067 ORTHO05D007327 1.5e-31 141.0 283 35.7
Manes.15G095100 Manihot esculenta HOM05D006067 ORTHO05D007327 1.5e-31 141.0 275 33.1
Psat4g136000 Pisum sativum HOM05D006067 ORTHO05D007327 1.5e-31 141.0 269 39.0
CSS0029215 Camellia sinensis var. sinensis HOM05D006067 ORTHO05D007327 2.0e-31 140.6 247 40.5
HanXRQChr13g0389481 Helianthus annuus HOM05D006067 ORTHO05D007327 2.6e-31 140.2 296 34.5
Cpa.g.sc77.10 Carica papaya HOM05D006067 ORTHO05D007327 3.4e-31 139.8 328 32.3
SalBow8G2822 Salvia bowleyana HOM05D006067 ORTHO05D007327 3.4e-31 139.8 317 32.5
CANSAT35G0531 Cannabis sativa HOM05D006067 ORTHO05D007327 1.0e-30 138.3 211 42.7
SGA_v2.0_scaffold70G23375 Striga asiatica HOM05D006067 ORTHO05D007327 1.0e-30 138.3 265 32.8
Ciclev10024254m.g Citrus clementina HOM05D006067 ORTHO05D007327 1.7e-30 137.5 190 42.6
COL.COLO4_17541 Corchorus olitorius HOM05D006067 ORTHO05D007327 2.2e-30 137.1 205 43.4
TWI38G1841 Tripterygium wilfordii HOM05D006067 ORTHO05D007327 2.2e-30 137.1 313 31.3
RcHm_v2.0_Chr5g0030881 Rosa chinensis HOM05D006067 ORTHO05D007327 2.9e-30 136.7 329 32.2
C02p35900 Brassica napus HOM05D006067 ORTHO05D007327 3.8e-30 136.3 245 37.1
BolC2t09603H Brassica oleracea HOM05D006067 ORTHO05D007327 3.8e-30 136.3 245 37.1
Haze_00805 Corylus avellana HOM05D006067 ORTHO05D007327 3.8e-30 136.3 219 43.8
Glyma.08G245900 Glycine max HOM05D006067 ORTHO05D007327 3.8e-30 136.3 201 40.8
Sopen10g003150 Solanum pennellii HOM05D006067 ORTHO05D007327 4.9e-30 136.0 276 34.4
MSTRG.6678 Avicennia marina HOM05D006067 ORTHO05D007327 6.5e-30 135.6 314 33.8
RcHm_v2.0_Chr7g0196621 Rosa chinensis HOM05D006067 ORTHO05D007327 6.5e-30 135.6 265 32.1
Duzib268G0832 Durio zibethinus HOM05D006067 ORTHO05D007327 8.4e-30 135.2 246 35.0
Lsat_1_v5_gn_9_99841 Lactuca sativa HOM05D006067 ORTHO05D007327 3.2e-29 133.3 262 38.9
Glyma.12G229800 Glycine max HOM05D006067 ORTHO05D007327 7.1e-29 132.1 157 46.5
Lalb_Chr03g0031151 Lupinus albus HOM05D006067 ORTHO05D007327 1.2e-28 131.3 275 34.9
PGR031G0069 Punica granatum HOM05D006067 ORTHO05D007327 1.6e-28 131.0 330 29.4
Thhalv10018481m.g Eutrema salsugineum HOM05D006067 ORTHO05D007327 2.1e-28 130.6 263 33.5
Lalb_Chr24g0400331 Lupinus albus HOM05D006067 ORTHO05D007327 2.1e-28 130.6 255 34.9
Prupe.4G164500 Prunus persica HOM05D006067 ORTHO05D007327 2.1e-28 130.6 157 52.9
Medtr2g076330 Medicago truncatula HOM05D006067 ORTHO05D007327 3.5e-28 129.8 211 40.3
Cfa015710 Carpinus fangiana HOM05D006067 ORTHO05D007327 4.6e-28 129.4 288 38.5
Lj3g0019341 Lotus japonicus HOM05D006067 ORTHO05D007327 6.0e-28 129.0 191 35.1
Sopen10g003170 Solanum pennellii HOM05D006067 ORTHO05D007327 7.9e-28 128.6 303 34.7
AT1G78810 Arabidopsis thaliana HOM05D006067 ORTHO05D007327 1.0e-27 128.3 267 36.7
BcaC03g15839 Brassica carinata HOM05D006067 ORTHO05D007327 1.0e-27 128.3 245 36.3
Phvul.011G162500 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 1.0e-27 128.3 274 37.2
Lalb_Chr14g0365891 Lupinus albus HOM05D006067 ORTHO05D007327 1.3e-27 127.9 217 40.1
BcaB05g25155 Brassica carinata HOM05D006067 ORTHO05D007327 2.3e-27 127.1 248 34.3
RcHm_v2.0_Chr1g0314351 Rosa chinensis HOM05D006067 ORTHO05D007327 2.3e-27 127.1 260 31.9
FvH4_3g18260 Fragaria vesca HOM05D006067 ORTHO05D007327 3.0e-27 126.7 262 33.6
VMungo1080G1893 Vigna mungo HOM05D006067 ORTHO05D007327 3.0e-27 126.7 168 43.5
Glyma.13G269800 Glycine max HOM05D006067 ORTHO05D007327 3.9e-27 126.3 190 39.5
Phvul.005G065400 Phaseolus vulgaris HOM05D006067 ORTHO05D007327 6.7e-27 125.6 164 40.9
Hund25365 Selenicereus undatus HOM05D006067 ORTHO05D007327 6.7e-27 125.6 270 35.6
TPR.G13942 Trifolium pratense HOM05D006067 ORTHO05D007327 6.7e-27 125.6 262 35.9
Carub.0002s2563 Capsella rubella HOM05D006067 ORTHO05D007327 8.7e-27 125.2 259 32.4
FAN11G2230 Fragaria x ananassa HOM05D006067 ORTHO05D007327 8.7e-27 125.2 264 33.0
Oeu031029.1 Olea europaea HOM05D006067 ORTHO05D007327 8.7e-27 125.2 294 31.3
Ca_26225_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 1.1e-26 124.8 298 33.9
arahy.Tifrunner.gnm1.ann1.2G52JQ Arachis hypogaea HOM05D006067 ORTHO05D007327 1.5e-26 124.4 233 31.3
Hma1.2p1_0290F.1_g114870 Hydrangea macrophylla HOM05D006067 ORTHO05D007327 1.5e-26 124.4 239 36.0
Sp5g33840 Schrenkiella parvula HOM05D006067 ORTHO05D007327 1.9e-26 124.0 261 34.5
MD11G1264000 Malus domestica HOM05D006067 ORTHO05D007327 2.5e-26 123.6 215 43.3
arahy.Tifrunner.gnm1.ann1.VQ55QZ Arachis hypogaea HOM05D006067 ORTHO05D007327 4.3e-26 122.9 219 38.4
AL2G39210 Arabidopsis lyrata HOM05D006067 ORTHO05D007327 7.4e-26 122.1 348 31.9
arahy.Tifrunner.gnm1.ann1.9BW5EX Arachis hypogaea HOM05D006067 ORTHO05D007327 7.4e-26 122.1 353 30.0
CARHR072360 Cardamine hirsuta HOM05D006067 ORTHO05D007327 6.3e-25 119.0 287 30.7
Ca_03979_v3 Cicer arietinum L. HOM05D006067 ORTHO05D007327 6.3e-25 119.0 203 43.3
Eucgr.F03271 Eucalyptus grandis HOM05D006067 ORTHO05D007327 6.3e-25 119.0 221 39.4
A02p22360 Brassica napus HOM05D006067 ORTHO05D007327 8.2e-25 118.6 241 34.9
BraA02t07240Z Brassica rapa HOM05D006067 ORTHO05D007327 8.2e-25 118.6 241 34.4
Lj3g0000770 Lotus japonicus HOM05D006067 ORTHO05D007327 8.2e-25 118.6 324 31.5
arahy.Tifrunner.gnm1.ann1.V1MG1J Arachis hypogaea HOM05D006067 ORTHO05D007327 1.1e-24 118.2 335 33.4
Peaxi162Scf00111g01468 Petunia axillaris HOM05D001990 ORTHO05D002033 1.8e-24 117.5 129 46.5
Rhsim04G0026500 Rhododendron simsii HOM05D006067 ORTHO05D007327 1.8e-24 117.5 268 36.6
Nitab4.5_0006953g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 2.4e-24 117.1 191 35.6
ATR0012G052 Amborella trichopoda HOM05D006067 ORTHO05D007327 5.3e-24 115.9 280 31.4
VMungo1127G0097 Vigna mungo HOM05D006067 ORTHO05D007327 2.6e-23 113.6 328 32.0
Eucgr.F03267 Eucalyptus grandis HOM05D006067 ORTHO05D007327 3.4e-23 113.2 267 34.5
Medtr0022s0280 Medicago truncatula HOM05D006067 ORTHO05D007327 5.9e-23 112.5 321 34.9
THA.LOC104812320 Tarenaya hassleriana HOM05D006067 ORTHO05D007327 1.0e-22 111.7 271 30.6
HPP92_012804 Vanilla planifolia HOM05D006067 ORTHO05D007327 1.3e-22 111.3 271 29.9
QL12p009545 Quercus lobata HOM05D006067 ORTHO05D007327 1.7e-22 110.9 85 55.3
TPR.G11309 Trifolium pratense HOM05D006067 ORTHO05D007327 1.7e-22 110.9 186 39.8
AUR62042783 Chenopodium quinoa HOM05D006067 ORTHO05D007327 3.8e-22 109.8 115 43.5
Sc16g0007610 Simmondsia chinensis HOM05D006067 ORTHO05D007327 1.1e-21 108.2 302 32.8
PGSC0003DMG400007100 Solanum tuberosum HOM05D006067 ORTHO05D007327 4.2e-21 106.3 225 31.6
Solyc07g062410.4 Solanum lycopersicum HOM05D006067 ORTHO05D007327 7.2e-21 105.5 218 32.6
RcHm_v2.0_Chr1g0357411 Rosa chinensis HOM05D006067 ORTHO05D007327 1.2e-20 104.8 152 36.8
Sopen07g030660 Solanum pennellii HOM05D006067 ORTHO05D007327 1.2e-20 104.8 218 32.6
AUR62007119 Chenopodium quinoa HOM05D006067 ORTHO05D007327 1.5e-18 97.8 79 50.6
Glyma.06G229200 Glycine max HOM05D006067 ORTHO05D007327 2.5e-18 97.1 196 38.3
Os01g0759000 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 5.7e-18 95.9 250 34.0
ECA240G2089 Erigeron canadensis HOM05D006067 ORTHO05D007327 1.3e-17 94.7 131 39.7
Mapoly0061s0049 Marchantia polymorpha HOM05D006067 ORTHO05D007327 1.8e-16 90.9 83 49.4
Zm00001eb152520 Zea mays HOM05D006067 ORTHO05D007327 5.3e-16 89.4 121 35.5
SalBow1G5118 Salvia bowleyana HOM05D006067 ORTHO05D007327 6.9e-16 89.0 101 44.6
Os06g0153600 Oryza sativa ssp. japonica HOM05D006067 ORTHO05D007327 1.2e-15 88.2 134 32.1
Nitab4.5_0003565g0020 Nicotiana tabacum HOM05D001990 ORTHO05D002033 1.3e-14 84.7 168 35.7
SEGI_27593 Sequoiadendron giganteum HOM05D006067 ORTHO05D007327 2.5e-13 80.5 176 36.4
Lj1P829T26 Lonicera japonica HOM05D006067 ORTHO05D007327 5.1e-11 72.8 126 33.3
PGSC0003DMG400021262 Solanum tuberosum HOM05D006067 ORTHO05D007327 1.1e-10 71.6 74 48.6
AUR62019577 Chenopodium quinoa HOM05D006067 ORTHO05D007327 7.4e-10 68.9 238 23.9
Mapoly1798s0001 Marchantia polymorpha HOM05D006067 ORTHO05D007327 7.4e-10 68.9 103 38.8
Nitab4.5_0000383g0160 Nicotiana tabacum HOM05D006067 ORTHO05D007327 9.7e-10 68.6 96 41.7
Pp3c23_21590 Physcomitrium patens HOM05D006067 ORTHO05D007327 1.3e-09 68.2 130 30.0
Eucgr.F03268 Eucalyptus grandis HOM05D006067 ORTHO05D007327 1.5e-07 61.2 51 51.0
FAN16G1756 Fragaria x ananassa HOM05D006067 ORTHO05D007327 1.5e-07 61.2 200 29.5
SHI37128 Sapria himalayana HOM05D006067 ORTHO05D007327 3.4e-07 60.1 54 46.3


User provided reference genes

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