Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.0e-77 292.4 146 100.0
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 1.9e-48 196.1 120 82.5
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 9.6e-48 193.7 119 82.4
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.6e-47 193.0 119 82.4
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 2.1e-47 192.6 147 71.4
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 4.8e-47 191.4 121 83.5
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 8.2e-47 190.7 121 81.0
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 8.2e-47 190.7 121 79.3
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 8.2e-47 190.7 120 80.0
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 8.2e-47 190.7 140 70.0
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 1.1e-46 190.3 118 80.5
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 1.8e-46 189.5 122 79.5
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 3.1e-46 188.7 118 81.4
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 3.1e-46 188.7 115 82.6
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 4.0e-46 188.3 140 70.0
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 4.0e-46 188.3 120 80.8
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 5.3e-46 188.0 140 70.0
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 6.9e-46 187.6 115 82.6
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 6.9e-46 187.6 118 81.4
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 9.0e-46 187.2 121 77.7
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 9.0e-46 187.2 116 81.0
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 9.0e-46 187.2 119 79.0
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 1.2e-45 186.8 120 80.0
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 1.2e-45 186.8 120 80.0
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 1.2e-45 186.8 120 80.0
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 1.2e-45 186.8 121 79.3
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.5e-45 186.4 121 81.0
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 1.5e-45 186.4 118 78.8
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.0e-45 186.0 118 79.7
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 2.0e-45 186.0 120 80.8
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 2.0e-45 186.0 119 78.2
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 2.6e-45 185.7 119 80.7
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.6e-45 185.7 119 80.7
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.6e-45 185.7 119 80.7
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 2.6e-45 185.7 119 79.8
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 2.6e-45 185.7 119 82.4
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 3.4e-45 185.3 119 79.8
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 3.4e-45 185.3 119 79.0
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 4.5e-45 184.9 121 80.2
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 4.5e-45 184.9 118 79.7
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 4.5e-45 184.9 118 78.8
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 4.5e-45 184.9 119 79.8
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 4.5e-45 184.9 121 77.7
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 4.5e-45 184.9 119 79.8
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 4.5e-45 184.9 121 79.3
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 5.8e-45 184.5 143 67.1
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 5.8e-45 184.5 133 72.2
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 5.8e-45 184.5 119 79.0
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 5.8e-45 184.5 120 79.2
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 5.8e-45 184.5 120 79.2
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 5.8e-45 184.5 120 79.2
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 5.8e-45 184.5 119 78.2
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 7.6e-45 184.1 119 79.8
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 7.6e-45 184.1 119 79.8
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.0e-44 183.7 119 79.0
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.0e-44 183.7 119 79.0
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 1.0e-44 183.7 118 82.2
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 1.0e-44 183.7 120 80.8
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 1.3e-44 183.3 119 80.7
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 1.7e-44 183.0 119 79.0
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 1.7e-44 183.0 120 75.8
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 1.7e-44 183.0 118 82.2
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 2.2e-44 182.6 119 77.3
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.9e-44 182.2 118 78.0
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 2.9e-44 182.2 118 78.0
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.9e-44 182.2 118 79.7
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.9e-44 182.2 118 79.7
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 3.8e-44 181.8 119 79.0
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 3.8e-44 181.8 143 67.1
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 4.9e-44 181.4 137 70.8
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 1.1e-43 180.3 123 76.4
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 1.1e-43 180.3 139 69.8
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 1.1e-43 180.3 120 76.7
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.4e-43 179.9 119 74.8
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 1.9e-43 179.5 120 76.7
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 1.9e-43 179.5 119 76.5
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 2.5e-43 179.1 121 75.2
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 2.5e-43 179.1 122 76.2
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 7.1e-43 177.6 120 75.0
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 7.1e-43 177.6 119 76.5
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 1.6e-42 176.4 120 75.8
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 1.6e-42 176.4 120 80.0
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 2.7e-42 175.6 136 66.9
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 2.7e-42 175.6 119 75.6
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 6.0e-42 174.5 121 74.4
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 6.0e-42 174.5 119 74.8
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 1.0e-41 173.7 120 74.2
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 1.0e-41 173.7 117 76.9
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 1.3e-41 173.3 118 76.3
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 1.3e-41 173.3 125 72.8
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.8e-41 172.9 114 78.9
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 2.3e-41 172.6 122 73.0
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 2.3e-41 172.6 116 72.4
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 3.0e-41 172.2 123 73.2
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 3.0e-41 172.2 118 76.3
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 3.9e-41 171.8 119 72.3
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 5.1e-41 171.4 123 73.2
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 6.7e-41 171.0 123 72.4
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 6.7e-41 171.0 123 72.4
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 6.7e-41 171.0 123 74.0
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 6.7e-41 171.0 122 74.6
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 1.1e-40 170.2 125 72.8
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.1e-40 170.2 116 75.9
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 1.9e-40 169.5 127 72.4
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 1.9e-40 169.5 127 72.4
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 1.9e-40 169.5 121 73.6
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 9.7e-40 167.2 116 74.1
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 4.8e-39 164.9 125 70.4
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 6.3e-39 164.5 118 72.0
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 1.1e-38 163.7 119 68.1
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 9.0e-38 160.6 108 75.9
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 5.9e-37 157.9 135 59.3
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 3.8e-36 155.2 120 67.5
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 7.9e-34 147.5 119 60.5
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 1.4e-33 146.7 118 66.1
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.1e-30 137.1 87 82.8
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.4e-30 136.0 87 82.8
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 4.1e-30 135.2 87 81.6
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 5.5e-27 124.8 107 57.0
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 1.4e-25 120.2 116 57.8
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 5.3e-22 108.2 92 62.0
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 4.5e-21 105.1 59 84.7
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 7.2e-19 97.8 80 66.2
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 7.2e-19 97.8 77 67.5
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 1.5e-16 90.1 112 50.0
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 7.4e-16 87.8 112 54.5
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 7.4e-16 87.8 73 65.8
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 2.8e-15 85.9 93 55.9
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 6.7e-09 64.7 105 36.2
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 3.7e-07 58.9 123 33.3
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 4.1e-06 55.5 129 30.2
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 5.3e-06 55.1 116 31.0
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 7.0e-06 54.7 123 34.1


User provided reference genes

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