Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3322 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 1.9e-119 432.6 229 100.0
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 4.4e-55 218.8 142 78.2
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 5.4e-21 105.5 132 43.9
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 7.6e-15 85.1 137 40.1
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 1.3e-14 84.3 207 33.3
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 1.3e-14 84.3 112 45.5
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 1.7e-14 84.0 113 46.0
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 1.7e-14 84.0 129 41.9
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 6.4e-14 82.0 102 47.1
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 1.4e-13 80.9 120 41.7
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 1.9e-13 80.5 94 51.1
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 4.6e-12 75.9 130 40.8
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 4.6e-12 75.9 130 40.8
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 4.6e-12 75.9 122 41.8
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 6.0e-12 75.5 134 40.3
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 1.3e-11 74.3 136 36.8
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 1.7e-11 73.9 94 45.7
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 3.0e-11 73.2 99 44.4
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 3.0e-11 73.2 99 43.4
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 8.7e-11 71.6 126 38.9
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 1.1e-10 71.2 228 28.1
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 2.5e-10 70.1 94 44.7
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 3.3e-10 69.7 123 39.8
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 4.3e-10 69.3 102 44.1
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 4.3e-10 69.3 102 44.1
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 5.6e-10 68.9 124 39.5
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 7.3e-10 68.6 102 43.1
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.3e-09 67.8 129 38.8
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 1.3e-09 67.8 129 38.8
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 1.3e-09 67.8 138 37.0
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 1.6e-09 67.4 136 34.6
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 1.6e-09 67.4 123 36.6
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.8e-09 66.6 102 43.1
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 4.8e-09 65.9 122 36.1
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 6.2e-09 65.5 113 42.5
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 8.1e-09 65.1 102 42.2
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 8.1e-09 65.1 126 36.5
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 1.4e-08 64.3 134 34.3
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 1.4e-08 64.3 141 34.0
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 1.8e-08 63.9 130 33.8
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 1.8e-08 63.9 130 35.4
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 2.4e-08 63.5 113 38.1
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 3.1e-08 63.2 158 31.6
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 5.3e-08 62.4 135 37.8
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 5.3e-08 62.4 123 36.6
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 9.0e-08 61.6 94 42.6
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 1.2e-07 61.2 109 40.4
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 1.5e-07 60.8 141 36.9
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 2.0e-07 60.5 126 36.5
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 2.0e-07 60.5 110 35.5
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 2.6e-07 60.1 99 38.4
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 3.4e-07 59.7 123 35.0
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 3.4e-07 59.7 125 37.6
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 3.4e-07 59.7 133 36.1
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 5.8e-07 58.9 134 35.1
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 5.8e-07 58.9 109 37.6
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 1.7e-06 57.4 110 37.3
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 8.4e-06 55.1 130 36.2


User provided reference genes

Program Settings