Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3308 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 1.6e-80 302.8 159 100.0
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 4.5e-75 284.6 159 90.6
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 1.2e-51 206.8 161 65.2
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 1.6e-51 206.5 161 65.2
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 1.3e-50 203.4 160 63.8
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 2.9e-50 202.2 163 63.8
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 6.6e-50 201.1 161 62.1
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 8.6e-50 200.7 162 69.1
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 8.6e-50 200.7 158 63.9
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 1.5e-49 199.9 162 66.0
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 1.5e-49 199.9 161 68.3
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 1.9e-49 199.5 163 62.6
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 1.9e-49 199.5 161 67.7
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 3.3e-49 198.7 168 65.5
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 5.6e-49 198.0 161 64.6
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 7.3e-49 197.6 162 63.6
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 9.5e-49 197.2 164 64.6
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 9.5e-49 197.2 163 65.0
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 9.5e-49 197.2 161 64.0
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 1.2e-48 196.8 160 61.2
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 1.2e-48 196.8 161 64.0
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 1.6e-48 196.4 165 63.0
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 1.6e-48 196.4 165 63.0
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 2.1e-48 196.1 161 64.0
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 2.8e-48 195.7 163 65.0
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 4.7e-48 194.9 166 62.0
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 6.2e-48 194.5 167 62.9
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 8.0e-48 194.1 164 62.2
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 1.0e-47 193.7 162 63.6
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 1.4e-47 193.4 163 63.2
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 1.4e-47 193.4 162 63.6
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 1.8e-47 193.0 162 63.0
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 2.3e-47 192.6 162 60.5
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 3.1e-47 192.2 162 63.0
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 5.2e-47 191.4 163 63.2
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 6.8e-47 191.0 163 63.8
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 8.9e-47 190.7 164 61.0
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 1.5e-46 189.9 164 63.4
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 1.5e-46 189.9 164 62.2
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 1.5e-46 189.9 165 61.8
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 2.0e-46 189.5 162 61.7
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.0e-46 189.5 162 61.7
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 2.0e-46 189.5 162 64.2
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 2.0e-46 189.5 162 61.7
Cpa.g.sc66.44 Carica papaya HOM05D004490 ORTHO05D005353 7.5e-46 187.6 161 62.7
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 7.5e-46 187.6 162 61.1
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 1.7e-45 186.4 164 60.4
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.2e-45 186.0 162 60.5
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 2.2e-45 186.0 162 63.0
EL10Ac1g00082 Beta vulgaris HOM05D004490 ORTHO05D005353 2.9e-45 185.7 162 61.1
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 4.9e-45 184.9 161 58.4
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 8.3e-45 184.1 164 59.8
Os01g0521500 Oryza sativa ssp. japonica HOM05D004490 ORTHO05D005353 8.3e-45 184.1 161 61.5
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 8.3e-45 184.1 161 62.1
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 1.1e-44 183.7 162 61.7
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 1.4e-44 183.3 164 59.1
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 1.4e-44 183.3 170 62.4
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 1.9e-44 183.0 170 58.8
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 4.1e-44 181.8 162 61.1
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 4.1e-44 181.8 163 61.3
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 5.4e-44 181.4 162 59.9
AUR62022689 Chenopodium quinoa HOM05D004490 ORTHO05D005353 7.0e-44 181.0 164 60.4
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 9.2e-44 180.6 158 62.0
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 9.2e-44 180.6 164 62.2
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 1.6e-43 179.9 167 58.7
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 2.0e-43 179.5 163 61.3
CSS0045593 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 4.6e-43 178.3 162 60.5
HPP92_020159 Vanilla planifolia HOM05D004490 ORTHO05D005353 4.6e-43 178.3 162 60.5
CSS0027711 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 7.8e-43 177.6 162 60.5
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 7.8e-43 177.6 167 59.3
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 1.3e-42 176.8 163 60.7
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 2.3e-42 176.0 170 58.2
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 3.0e-42 175.6 169 58.6
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 6.6e-42 174.5 169 58.0
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 6.6e-42 174.5 169 56.2
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 6.6e-42 174.5 171 58.5
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 2.5e-41 172.6 166 59.6
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 7.3e-41 171.0 167 56.3
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 9.5e-41 170.6 153 60.1
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 1.2e-40 170.2 151 59.6
FvH4_3g44892 Fragaria vesca HOM05D004490 ORTHO05D005353 1.6e-40 169.9 162 58.0
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 2.8e-40 169.1 172 57.6
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 2.8e-40 169.1 172 57.6
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 3.6e-40 168.7 164 59.8
SEGI_05919 Sequoiadendron giganteum HOM05D004490 ORTHO05D005353 4.7e-40 168.3 165 58.2
RcHm_v2.0_Chr5g0082701 Rosa chinensis HOM05D004490 ORTHO05D005353 8.1e-40 167.5 161 57.1
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 1.1e-39 167.2 172 57.0
BNapus_Darmor_BZH_scaffold_278p00040 Brassica napus HOM05D004490 ORTHO05D005353 1.1e-39 167.2 172 57.0
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 1.1e-39 167.2 172 57.0
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 1.1e-39 167.2 181 53.6
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 1.8e-39 166.4 153 56.9
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 6.8e-39 164.5 155 57.4
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 2.6e-38 162.5 173 55.5
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 7.5e-38 161.0 161 58.4
Zm00001eb427930 Zea mays HOM05D004490 ORTHO05D005353 7.5e-38 161.0 161 56.5
AUR62022497 Chenopodium quinoa HOM05D004490 ORTHO05D005353 9.8e-38 160.6 162 54.3
RcHm_v2.0_Chr5g0081671 Rosa chinensis HOM05D004490 ORTHO05D005353 1.3e-37 160.2 161 55.9
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 1.3e-37 160.2 164 57.9
Nitab4.5_0000277g0020 Nicotiana tabacum HOM05D004490 ORTHO05D005353 2.9e-37 159.1 162 59.3
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 4.1e-36 155.2 135 63.7
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 1.2e-35 153.7 160 54.4
FAN21G1156 Fragaria x ananassa HOM05D004490 ORTHO05D005353 3.5e-35 152.1 156 53.8
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 6.0e-35 151.4 163 56.4
unitig_699.g19825 Utricularia gibba HOM05D004490 ORTHO05D005353 1.1e-33 147.1 160 51.2
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 2.5e-33 146.0 170 52.9
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 3.3e-33 145.6 162 51.9
FAN11G3016 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.1e-32 142.9 156 52.6
SHI09004 Sapria himalayana HOM05D004490 ORTHO05D005353 6.2e-32 141.4 163 57.1
FAN25G2105 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.0e-30 136.3 156 51.3
Pp3c14_7350 Physcomitrium patens HOM05D004490 ORTHO05D005353 2.2e-29 132.9 167 47.3
Mapoly0003s0077 Marchantia polymorpha HOM05D004490 ORTHO05D005353 8.4e-29 131.0 181 45.3
CBR_g58400 Chara braunii HOM05D004490 ORTHO05D005353 1.6e-24 116.7 170 44.1
Sopen01g003870 Solanum pennellii HOM05D004490 ORTHO05D005353 8.9e-23 110.9 148 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3521 Anthoceros agrestis HOM05D004490 ORTHO05D005353 3.4e-22 109.0 172 44.2
Prupe.3G081100 Prunus persica HOM05D004490 ORTHO05D005353 2.2e-21 106.3 159 39.6
TAR622G0885 Trochodendron aralioides HOM05D004490 ORTHO05D005353 2.9e-21 105.9 91 67.0
Gorai.012G182200 Gossypium raimondii HOM05D004490 ORTHO05D005353 4.6e-19 98.6 166 39.8
TAR630G0004 Trochodendron aralioides HOM05D004490 ORTHO05D005353 4.6e-19 98.6 91 63.7
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 1.3e-18 97.1 94 60.6
RcHm_v2.0_Chr5g0082081 Rosa chinensis HOM05D004490 ORTHO05D005353 3.0e-18 95.9 91 59.3
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 3.9e-18 95.5 60 76.7
FvH4_3g44960 Fragaria vesca HOM05D004490 ORTHO05D005353 1.1e-17 94.0 94 59.6
FAN11G0711 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.5e-17 92.8 117 50.4
SHI54375 Sapria himalayana HOM05D004490 ORTHO05D005353 1.3e-16 90.5 95 55.8
SHI41020 Sapria himalayana HOM05D004490 ORTHO05D005353 1.6e-16 90.1 95 55.8
Actinidia03513 Actinidia chinensis HOM05D004490 ORTHO05D005353 9.9e-14 80.9 66 62.1
PGSC0003DMG400016394 Solanum tuberosum HOM05D004490 ORTHO05D002367 1.7e-13 80.1 150 35.3
Gohir.A04G142550 Gossypium hirsutum HOM05D004490 ORTHO05D005353 6.4e-13 78.2 159 37.1
PRCOL_00002362 Prasinoderma coloniale HOM05D004490 ORTHO05D005353 1.1e-12 77.4 176 33.5
SEGI_30950 Sequoiadendron giganteum HOM05D023998 ORTHO05D005353 3.9e-10 68.9 63 57.1
Gohir.D04G186001 Gossypium hirsutum HOM05D004490 ORTHO05D005353 2.1e-08 63.2 90 46.7
SHI09800 Sapria himalayana HOM05D003107 ORTHO05D003092 5.8e-06 55.1 38 63.2


User provided reference genes

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