Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3275 Ceratophyllum demersum HOM05D000121 ORTHO05D007423 5.1e-78 294.3 143 100.0
MBI15_g18249_MAGBIO Magnolia biondii HOM05D000121 ORTHO05D007423 4.4e-21 105.1 78 62.8
Nn8g39907 Nelumbo nucifera HOM05D000121 ORTHO05D007423 2.1e-18 96.3 78 57.7
HPP92_015868 Vanilla planifolia HOM05D000121 ORTHO05D007423 2.1e-18 96.3 92 48.9
EL10Ac9g22203 Beta vulgaris HOM05D000121 ORTHO05D007423 1.9e-16 89.7 90 50.0
ClCG10G012900 Citrullus lanatus HOM05D000121 ORTHO05D007423 1.9e-16 89.7 92 51.1
TAR625G0397 Trochodendron aralioides HOM05D000121 ORTHO05D007423 2.5e-16 89.4 78 57.7
Lalb_Chr22g0349431 Lupinus albus HOM05D000121 ORTHO05D007423 5.6e-16 88.2 71 59.2
Prupe.3G098500 Prunus persica HOM05D000121 ORTHO05D007423 5.6e-16 88.2 70 55.7
ATR0739G176 Amborella trichopoda HOM05D000121 ORTHO05D007423 9.5e-16 87.4 71 59.2
MD09G1225000 Malus domestica HOM05D000121 ORTHO05D007423 1.2e-15 87.0 70 54.3
CsaV3_3G032770 Cucumis sativus L. HOM05D000121 ORTHO05D007423 1.6e-15 86.7 92 50.0
Atru.chr10.2415_Atru.chr10.2416 Acer truncatum HOM05D000121 ORTHO05D007423 2.8e-15 85.9 88 47.7
MELO3C026737.2 Cucumis melo HOM05D000121 ORTHO05D007423 2.8e-15 85.9 71 56.3
HanXRQChr04g0099601 Helianthus annuus HOM05D000121 ORTHO05D007423 2.8e-15 85.9 71 56.3
Sed0004285 Sechium edule HOM05D000121 ORTHO05D007423 2.8e-15 85.9 91 49.5
Cfa001878 Carpinus fangiana HOM05D000121 ORTHO05D007423 4.7e-15 85.1 71 56.3
Haze_16670 Corylus avellana HOM05D000121 ORTHO05D007423 4.7e-15 85.1 71 56.3
QL05p035924 Quercus lobata HOM05D000121 ORTHO05D007423 4.7e-15 85.1 71 54.9
RcHm_v2.0_Chr2g0132931 Rosa chinensis HOM05D000121 ORTHO05D007423 6.2e-15 84.7 70 54.3
Lsat_1_v5_gn_1_31080 Lactuca sativa HOM05D000121 ORTHO05D007423 8.1e-15 84.3 71 54.9
Lj9C493G4 Lonicera japonica HOM05D000121 ORTHO05D007423 8.1e-15 84.3 89 49.4
Lj3g0008200 Lotus japonicus HOM05D000121 ORTHO05D007423 8.1e-15 84.3 81 50.6
Actinidia00678 Actinidia chinensis HOM05D000121 ORTHO05D007423 1.4e-14 83.6 78 51.3
Ciclev10024806m.g Citrus clementina HOM05D000121 ORTHO05D007423 1.4e-14 83.6 71 54.9
Sc12g0008290 Simmondsia chinensis HOM05D000121 ORTHO05D007423 1.4e-14 83.6 71 54.9
Phvul.005G175600 Phaseolus vulgaris HOM05D000121 ORTHO05D007423 1.8e-14 83.2 71 53.5
GSVIVG01015962001 Vitis vinifera HOM05D000121 ORTHO05D007423 1.8e-14 83.2 67 58.2
Ah.01g024650 Amaranthus hybridus HOM05D000121 ORTHO05D007423 5.2e-14 81.6 71 52.1
FvH4_6g28590 Fragaria vesca HOM05D000121 ORTHO05D007423 5.2e-14 81.6 70 52.9
FAN05G1320 Fragaria x ananassa HOM05D000121 ORTHO05D007423 5.2e-14 81.6 70 52.9
FAN14G1613 Fragaria x ananassa HOM05D000121 ORTHO05D007423 5.2e-14 81.6 70 52.9
PGR102G2529 Punica granatum HOM05D000121 ORTHO05D007423 5.2e-14 81.6 71 53.5
CiPaw.01G254800 Carya illinoinensis HOM05D000121 ORTHO05D007423 8.9e-14 80.9 71 53.5
VMungo1080G0885 Vigna mungo HOM05D000121 ORTHO05D007423 8.9e-14 80.9 71 53.5
AUR62027001 Chenopodium quinoa HOM05D000121 ORTHO05D007423 1.2e-13 80.5 71 53.5
DCAR_003926 Daucus carota HOM05D000121 ORTHO05D007423 1.2e-13 80.5 85 47.1
Dinv21413 Davidia involucrata HOM05D000121 ORTHO05D007423 1.2e-13 80.5 78 50.0
Peaxi162Scf00553g00540 Petunia axillaris HOM05D000121 ORTHO05D007423 1.2e-13 80.5 71 50.7
arahy.Tifrunner.gnm1.ann1.AY4NJ9 Arachis hypogaea HOM05D000121 ORTHO05D007423 2.6e-13 79.3 89 46.1
Sopen03g036450 Solanum pennellii HOM05D000121 ORTHO05D007423 2.6e-13 79.3 71 47.9
Thecc.06G042000 Theobroma cacao HOM05D000121 ORTHO05D007423 2.6e-13 79.3 71 53.5
Glyma.13G370300 Glycine max HOM05D000121 ORTHO05D007423 3.4e-13 79.0 71 53.5
Rhsim08G0205400 Rhododendron simsii HOM05D000121 ORTHO05D007423 3.4e-13 79.0 78 50.0
arahy.Tifrunner.gnm1.ann1.5LV02X Arachis hypogaea HOM05D000121 ORTHO05D007423 4.4e-13 78.6 89 46.1
CSS0023899 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D007423 4.4e-13 78.6 84 48.8
CAN.G407.8 Capsicum annuum HOM05D000121 ORTHO05D007423 4.4e-13 78.6 71 50.7
Solyc03g117540.4 Solanum lycopersicum HOM05D000121 ORTHO05D007423 4.4e-13 78.6 71 47.9
MSTRG.11184 Avicennia marina HOM05D000121 ORTHO05D007423 5.8e-13 78.2 90 46.7
Manes.11G066800 Manihot esculenta HOM05D000121 ORTHO05D007423 5.8e-13 78.2 83 47.0
Gohir.D05G119900 Gossypium hirsutum HOM05D000121 ORTHO05D007423 7.5e-13 77.8 71 53.5
Potri.003G182601 Populus trichocarpa HOM05D000121 ORTHO05D007423 7.5e-13 77.8 70 52.9
Cc04_g05140 Coffea canephora HOM05D000121 ORTHO05D007423 9.9e-13 77.4 78 46.2
Duzib235G1084 Durio zibethinus HOM05D000121 ORTHO05D007423 9.9e-13 77.4 71 53.5
Oeu009804.1 Olea europaea HOM05D000121 ORTHO05D007423 9.9e-13 77.4 71 53.5
CANSAT56G2614 Cannabis sativa HOM05D000121 ORTHO05D007423 2.2e-12 76.3 89 46.1
Gorai.009G123500 Gossypium raimondii HOM05D000121 ORTHO05D007423 2.2e-12 76.3 71 52.1
ECA247G2933 Erigeron canadensis HOM05D000121 ORTHO05D007423 2.9e-12 75.9 71 50.7
Eucgr.F03961 Eucalyptus grandis HOM05D000121 ORTHO05D007423 2.9e-12 75.9 67 53.7
Gohir.A05G119000 Gossypium hirsutum HOM05D000121 ORTHO05D007423 2.9e-12 75.9 71 50.7
Migut.I00691 Erythranthe guttata HOM05D000121 ORTHO05D007423 4.9e-12 75.1 71 53.5
vmacro19059 Vaccinium macrocarpon HOM05D000121 ORTHO05D007423 4.9e-12 75.1 90 44.4
PSO384G0944 Papaver somniferum HOM05D000121 ORTHO05D007423 6.4e-12 74.7 71 50.7
CSS0047540 Camellia sinensis var. sinensis HOM05D000121 ORTHO05D007423 8.3e-12 74.3 77 50.6
COL.COLO4_26706 Corchorus olitorius HOM05D000121 ORTHO05D007423 8.3e-12 74.3 67 52.2
Actinidia11263 Actinidia chinensis HOM05D000121 ORTHO05D007423 1.1e-11 73.9 74 47.3
TPR.G19154 Trifolium pratense HOM05D000121 ORTHO05D007423 1.4e-11 73.6 71 52.1
AUR62030841 Chenopodium quinoa HOM05D000121 ORTHO05D007423 1.9e-11 73.2 71 49.3
Sabra03G0133400 Salix brachista HOM05D000121 ORTHO05D007423 1.9e-11 73.2 72 50.0
Aa31sc61G130 Aethionema arabicum HOM05D000121 ORTHO05D007423 2.4e-11 72.8 71 49.3
Aqoxy7G02250 Aquilegia oxysepala HOM05D000121 ORTHO05D007423 3.2e-11 72.4 83 47.0
Aqoxy7G02252 Aquilegia oxysepala HOM05D000121 ORTHO05D007423 3.2e-11 72.4 83 47.0
SalBow7G3127 Salvia bowleyana HOM05D000121 ORTHO05D007423 4.1e-11 72.0 78 46.2
Ca_01014_v3 Cicer arietinum L. HOM05D000121 ORTHO05D007423 1.2e-10 70.5 71 50.7
Os06g0184700 Oryza sativa ssp. japonica HOM05D000121 ORTHO05D007423 1.2e-10 70.5 85 44.7
Thhalv10024220m.g Eutrema salsugineum HOM05D000121 ORTHO05D007423 1.6e-10 70.1 71 49.3
A03p51040 Brassica napus HOM05D000121 ORTHO05D007423 3.5e-10 68.9 85 44.7
BraA03t14190Z Brassica rapa HOM05D000121 ORTHO05D007423 3.5e-10 68.9 85 44.7
Medtr2g105190 Medicago truncatula HOM05D000121 ORTHO05D007423 3.5e-10 68.9 71 47.9
Zm00001eb374580 Zea mays HOM05D000121 ORTHO05D007423 4.6e-10 68.6 80 45.0
Psat5g098320 Pisum sativum HOM05D000121 ORTHO05D007423 1.0e-09 67.4 71 47.9
BolC7t45452H Brassica oleracea HOM05D000121 ORTHO05D007423 1.7e-09 66.6 71 47.9
C07p49470 Brassica napus HOM05D000121 ORTHO05D007423 3.0e-09 65.9 71 47.9
Sp7g16030 Schrenkiella parvula HOM05D000121 ORTHO05D007423 6.6e-09 64.7 71 46.5
CARHR104110 Cardamine hirsuta HOM05D000121 ORTHO05D007423 1.1e-08 63.9 71 43.7
AagrBONN_evm.TU.Sc2ySwM_369.271 Anthoceros agrestis HOM05D000121 ORTHO05D007423 1.5e-08 63.5 71 43.7
AL3G44200 Arabidopsis lyrata HOM05D000121 ORTHO05D007423 3.3e-08 62.4 71 43.7
AT2G07680 Arabidopsis thaliana HOM05D000121 ORTHO05D007423 7.3e-08 61.2 71 43.7
Pp3c22_9930 Physcomitrium patens HOM05D000121 ORTHO05D007423 1.2e-07 60.5 74 41.9
TWI18G1091 Tripterygium wilfordii HOM05D000121 ORTHO05D007423 1.6e-07 60.1 71 43.7
Mapoly0011s0164 Marchantia polymorpha HOM05D000121 ORTHO05D007423 2.1e-07 59.7 71 40.8
Actinidia17457 Actinidia chinensis HOM05D004408 ORTHO05D005486 6.8e-06 54.7 49 44.9


User provided reference genes

Program Settings