Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3260 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 4.9e-44 180.6 85 100.0
CDE09G0321 Ceratophyllum demersum HOM05D005224 ORTHO05D006372 3.0e-41 171.4 85 94.1
Lsat_1_v5_gn_3_24761 Lactuca sativa HOM05D005224 ORTHO05D006372 6.4e-36 153.7 84 84.5
Phvul.001G207200 Phaseolus vulgaris HOM05D005224 ORTHO05D006372 1.1e-35 152.9 85 85.9
TAR365G0183 Trochodendron aralioides HOM05D005224 ORTHO05D006372 1.9e-35 152.1 84 84.5
vmacro03691 Vaccinium macrocarpon HOM05D005224 ORTHO05D006372 1.9e-35 152.1 83 86.7
CANSAT25G2283 Cannabis sativa HOM05D005224 ORTHO05D006372 2.4e-35 151.8 84 84.5
Cfa005919 Carpinus fangiana HOM05D005224 ORTHO05D006372 2.4e-35 151.8 84 84.5
Nn4g25791 Nelumbo nucifera HOM05D005224 ORTHO05D006372 2.4e-35 151.8 84 82.1
Actinidia24346 Actinidia chinensis HOM05D001413 ORTHO05D001385 3.2e-35 151.4 74 91.9
Haze_04931 Corylus avellana HOM05D005224 ORTHO05D006372 3.2e-35 151.4 84 84.5
Manes.05G062300 Manihot esculenta HOM05D005224 ORTHO05D006372 3.2e-35 151.4 84 84.5
HanXRQChr06g0173941 Helianthus annuus HOM05D005224 ORTHO05D006372 5.4e-35 150.6 84 83.3
Hund11874 Selenicereus undatus HOM05D005224 ORTHO05D006372 5.4e-35 150.6 84 83.3
Dinv44366 Davidia involucrata HOM05D005224 ORTHO05D006372 7.1e-35 150.2 84 83.3
ECA246G3542 Erigeron canadensis HOM05D005224 ORTHO05D006372 7.1e-35 150.2 84 83.3
Dinv29760 Davidia involucrata HOM05D005224 ORTHO05D006372 9.3e-35 149.8 84 83.3
Duzib133G0273 Durio zibethinus HOM05D005224 ORTHO05D006372 9.3e-35 149.8 84 83.3
HanXRQChr17g0538761 Helianthus annuus HOM05D005224 ORTHO05D006372 9.3e-35 149.8 85 85.9
TWI23G0618 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 9.3e-35 149.8 85 83.5
CSS0034435 Camellia sinensis var. sinensis HOM05D005224 ORTHO05D006372 1.2e-34 149.4 74 90.5
Gohir.A12G130700 Gossypium hirsutum HOM05D005224 ORTHO05D006372 1.2e-34 149.4 84 82.1
Gohir.D12G134600 Gossypium hirsutum HOM05D005224 ORTHO05D006372 1.2e-34 149.4 84 82.1
Gorai.008G145500 Gossypium raimondii HOM05D005224 ORTHO05D006372 1.2e-34 149.4 84 82.1
HPP92_017223 Vanilla planifolia HOM05D005224 ORTHO05D006372 1.2e-34 149.4 86 82.6
Aqoxy2G02950 Aquilegia oxysepala HOM05D005224 ORTHO05D006372 1.6e-34 149.1 85 82.4
AT3G62790 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 1.6e-34 149.1 85 82.4
Carub.0005s2944 Capsella rubella HOM05D005224 ORTHO05D006372 1.6e-34 149.1 85 82.4
DCAR_027069 Daucus carota HOM05D005224 ORTHO05D006372 1.6e-34 149.1 83 83.1
Ah.02g128370 Amaranthus hybridus HOM05D005224 ORTHO05D006372 2.1e-34 148.7 84 82.1
AT2G47690 Arabidopsis thaliana HOM05D005224 ORTHO05D006372 2.1e-34 148.7 85 82.4
Duzib211G0376 Durio zibethinus HOM05D005224 ORTHO05D006372 2.1e-34 148.7 84 81.0
Gohir.A08G075800 Gossypium hirsutum HOM05D005224 ORTHO05D006372 2.1e-34 148.7 84 82.1
Gorai.004G089700 Gossypium raimondii HOM05D005224 ORTHO05D006372 2.1e-34 148.7 84 82.1
arahy.Tifrunner.gnm1.ann1.8KN71Z Arachis hypogaea HOM05D005224 ORTHO05D006372 2.7e-34 148.3 75 89.3
arahy.Tifrunner.gnm1.ann1.EEQ3S4 Arachis hypogaea HOM05D005224 ORTHO05D006372 2.7e-34 148.3 75 89.3
arahy.Tifrunner.gnm1.ann1.U5VDRT Arachis hypogaea HOM05D005224 ORTHO05D006372 2.7e-34 148.3 75 89.3
Cc04_g11150 Coffea canephora HOM05D005224 ORTHO05D006372 2.7e-34 148.3 85 81.2
Thhalv10006347m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 2.7e-34 148.3 85 82.4
Manes.01G218400 Manihot esculenta HOM05D005224 ORTHO05D006372 2.7e-34 148.3 83 81.9
Sp4g29630 Schrenkiella parvula HOM05D005224 ORTHO05D006372 2.7e-34 148.3 85 82.4
BcaB02g08753 Brassica carinata HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 82.4
BcaC07g40762 Brassica carinata HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 82.4
BcaC07g42731 Brassica carinata HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 82.4
BcaNung06420 Brassica carinata HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 82.4
A09p54640 Brassica napus HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 82.4
C08p37540 Brassica napus HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 82.4
BraA09t40875Z Brassica rapa HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 82.4
Glyma.03G214500 Glycine max HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 81.2
Gohir.A08G042400 Gossypium hirsutum HOM05D005224 ORTHO05D006372 3.5e-34 147.9 84 81.0
Gohir.D08G052200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 3.5e-34 147.9 84 81.0
Gorai.004G052300 Gossypium raimondii HOM05D005224 ORTHO05D006372 3.5e-34 147.9 84 81.0
PSO210G7006 Papaver somniferum HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 80.0
Sp5g00730 Schrenkiella parvula HOM05D005224 ORTHO05D006372 3.5e-34 147.9 85 82.4
BcaB02g07318 Brassica carinata HOM05D005224 ORTHO05D006372 4.6e-34 147.5 85 80.0
Hma1.2p1_1185F.1_g264980 Hydrangea macrophylla HOM05D005224 ORTHO05D006372 4.6e-34 147.5 77 87.0
MD03G1287600 Malus domestica HOM05D005224 ORTHO05D006372 4.6e-34 147.5 84 82.1
AL4G47260 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 6.0e-34 147.1 85 81.2
AL5G45570 Arabidopsis lyrata HOM05D005224 ORTHO05D006372 6.0e-34 147.1 83 81.9
Thhalv10001702m.g Eutrema salsugineum HOM05D005224 ORTHO05D006372 6.0e-34 147.1 85 81.2
Gohir.D08G085200 Gossypium hirsutum HOM05D005224 ORTHO05D006372 6.0e-34 147.1 84 81.0
Lalb_Chr15g0078521 Lupinus albus HOM05D005224 ORTHO05D006372 6.0e-34 147.1 85 81.2
PSO170G2085 Papaver somniferum HOM05D005224 ORTHO05D006372 7.9e-34 146.7 85 78.8
Thecc.01G299700 Theobroma cacao HOM05D005224 ORTHO05D006372 7.9e-34 146.7 84 82.1
Carub.0004s3041 Capsella rubella HOM05D005224 ORTHO05D006372 1.0e-33 146.4 83 80.7
CARHR143080 Cardamine hirsuta HOM05D005224 ORTHO05D006372 1.0e-33 146.4 83 81.9
MBI18_g06871_MAGBIO Magnolia biondii HOM05D005224 ORTHO05D006372 1.0e-33 146.4 84 81.0
Prupe.8G260800 Prunus persica HOM05D005224 ORTHO05D006372 1.0e-33 146.4 84 81.0
PGR042G0105 Punica granatum HOM05D005224 ORTHO05D006372 1.0e-33 146.4 84 81.0
Glyma.19G211200 Glycine max HOM05D005224 ORTHO05D006372 1.3e-33 146.0 85 80.0
TWI14G1007 Tripterygium wilfordii HOM05D005224 ORTHO05D006372 1.3e-33 146.0 85 81.2
GSVIVG01035146001 Vitis vinifera HOM05D005224 ORTHO05D006372 1.3e-33 146.0 81 86.4
Lj1g0012977 Lotus japonicus HOM05D005224 ORTHO05D006372 1.8e-33 145.6 88 79.5
Actinidia32220 Actinidia chinensis HOM05D005224 ORTHO05D006372 2.3e-33 145.2 77 84.4
Aa31LG1G29010 Aethionema arabicum HOM05D005224 ORTHO05D006372 2.3e-33 145.2 83 80.7
EL10Ac3g05917 Beta vulgaris HOM05D005224 ORTHO05D006372 2.3e-33 145.2 85 80.0
BolC6t38010H Brassica oleracea HOM05D005224 ORTHO05D006372 2.3e-33 145.2 82 80.5
Ciclev10033216m.g Citrus clementina HOM05D005224 ORTHO05D006372 2.3e-33 145.2 73 90.4
Psat3g022120 Pisum sativum HOM05D005224 ORTHO05D006372 2.3e-33 145.2 85 81.2
Sed0019318 Sechium edule HOM05D005224 ORTHO05D006372 2.3e-33 145.2 79 82.3
CARHR173060 Cardamine hirsuta HOM05D005224 ORTHO05D006372 3.0e-33 144.8 85 81.2
Medtr7g108810 Medicago truncatula HOM05D001413 ORTHO05D001385 3.0e-33 144.8 87 79.3
PSO210G2815 Papaver somniferum HOM05D005224 ORTHO05D006372 3.0e-33 144.8 81 82.7
THA.LOC104817499 Tarenaya hassleriana HOM05D005224 ORTHO05D006372 3.0e-33 144.8 85 78.8
TPR.G9599 Trifolium pratense HOM05D005224 ORTHO05D006372 3.0e-33 144.8 85 80.0
Zm00001eb039670 Zea mays HOM05D005224 ORTHO05D006372 3.0e-33 144.8 76 86.8
BcaC02g12549 Brassica carinata HOM05D005224 ORTHO05D006372 3.9e-33 144.4 85 81.2
A07p26090 Brassica napus HOM05D005224 ORTHO05D006372 3.9e-33 144.4 83 79.5
C04p00180 Brassica napus HOM05D005224 ORTHO05D006372 3.9e-33 144.4 85 81.2
BolC4t21665H Brassica oleracea HOM05D005224 ORTHO05D006372 3.9e-33 144.4 85 81.2
BraA05t19024Z Brassica rapa HOM05D005224 ORTHO05D006372 3.9e-33 144.4 85 80.0
Migut.D00213 Erythranthe guttata HOM05D005224 ORTHO05D006372 3.9e-33 144.4 85 80.0
FvH4_2g25680 Fragaria vesca HOM05D005224 ORTHO05D006372 3.9e-33 144.4 84 81.0
FAN15G2088 Fragaria x ananassa HOM05D005224 ORTHO05D006372 3.9e-33 144.4 84 81.0
FAN20G0551 Fragaria x ananassa HOM05D005224 ORTHO05D006372 3.9e-33 144.4 84 81.0
FAN27G2170 Fragaria x ananassa HOM05D005224 ORTHO05D006372 3.9e-33 144.4 84 81.0
Potri.014G129600 Populus trichocarpa HOM05D005224 ORTHO05D006372 3.9e-33 144.4 85 77.6
ClCG10G010880 Citrullus lanatus HOM05D005224 ORTHO05D006372 5.1e-33 144.1 79 82.3
Lalb_Chr04g0259841 Lupinus albus HOM05D005224 ORTHO05D006372 5.1e-33 144.1 85 80.0
Sed0018249 Sechium edule HOM05D005224 ORTHO05D006372 5.1e-33 144.1 79 82.3
PSO832G3231 Papaver somniferum HOM05D005224 ORTHO05D006372 6.7e-33 143.7 81 81.5
RcHm_v2.0_Chr6g0293941 Rosa chinensis HOM05D005224 ORTHO05D006372 6.7e-33 143.7 84 79.8
A05p00270 Brassica napus HOM05D005224 ORTHO05D006372 8.7e-33 143.3 85 80.0
C06p28410 Brassica napus HOM05D005224 ORTHO05D006372 8.7e-33 143.3 77 84.4
QL12p028550 Quercus lobata HOM05D005224 ORTHO05D006372 8.7e-33 143.3 84 77.4
unitig_0.g663 Utricularia gibba HOM05D005224 ORTHO05D006372 8.7e-33 143.3 83 79.5
ATR0796G245 Amborella trichopoda HOM05D005224 ORTHO05D006372 1.1e-32 142.9 74 87.8
Eucgr.K03475 Eucalyptus grandis HOM05D005224 ORTHO05D006372 1.1e-32 142.9 84 78.6
Cpa.g.sc19.280 Carica papaya HOM05D005224 ORTHO05D006372 1.5e-32 142.5 83 77.1
CsaV3_4G000760 Cucumis sativus L. HOM05D005224 ORTHO05D006372 5.6e-32 140.6 79 79.7
Migut.D02475 Erythranthe guttata HOM05D005224 ORTHO05D006372 5.6e-32 140.6 85 77.6
Potri.002G204800 Populus trichocarpa HOM05D005224 ORTHO05D006372 5.6e-32 140.6 71 85.9
Nitab4.5_0011375g0020 Nicotiana tabacum HOM05D005224 ORTHO05D006372 9.6e-32 139.8 69 88.4
CiPaw.07G108200 Carya illinoinensis HOM05D005224 ORTHO05D006372 1.3e-31 139.4 85 75.3
Os08g0556600 Oryza sativa ssp. japonica HOM05D005224 ORTHO05D006372 2.1e-31 138.7 76 81.6
MELO3C017960.2 Cucumis melo HOM05D005224 ORTHO05D006372 3.7e-31 137.9 79 78.5
Sc25g0004000 Simmondsia chinensis HOM05D005224 ORTHO05D006372 6.2e-31 137.1 103 68.0
Peaxi162Scf00589g00224 Petunia axillaris HOM05D005224 ORTHO05D006372 1.1e-30 136.3 65 90.8
Solyc11g005880.2 Solanum lycopersicum HOM05D005224 ORTHO05D006372 5.3e-30 134.0 62 93.5
Sopen11g001830 Solanum pennellii HOM05D005224 ORTHO05D006372 5.3e-30 134.0 62 93.5
TAR370G0003 Trochodendron aralioides HOM05D005224 ORTHO05D006372 9.0e-30 133.3 63 92.1
PGSC0003DMG400028681 Solanum tuberosum HOM05D005224 ORTHO05D006372 1.5e-29 132.5 61 93.4
COL.COLO4_23352 Corchorus olitorius HOM05D005224 ORTHO05D006372 2.6e-29 131.7 105 63.8
SalBow3G4056 Salvia bowleyana HOM05D005224 ORTHO05D006372 2.6e-29 131.7 110 60.9
ECA240G1836 Erigeron canadensis HOM05D002891 ORTHO05D003369 3.4e-29 131.3 78 83.3
Nitab4.5_0000805g0100 Nicotiana tabacum HOM05D005224 ORTHO05D006372 7.6e-29 130.2 61 91.8
SHI19781 Sapria himalayana HOM05D005224 ORTHO05D006372 1.3e-28 129.4 72 79.2
CAN.G652.1 Capsicum annuum HOM05D005224 ORTHO05D006372 4.9e-28 127.5 60 90.0
BcaC08g45239 Brassica carinata HOM05D005224 ORTHO05D006372 7.1e-27 123.6 57 93.0
Oeu054123.1 Olea europaea HOM05D005224 ORTHO05D006372 3.3e-24 114.8 50 96.0
TAR633G1838 Trochodendron aralioides HOM05D005224 ORTHO05D006372 3.3e-24 114.8 63 82.5
HanXRQChr08g0223921 Helianthus annuus HOM05D005224 ORTHO05D006372 4.3e-24 114.4 52 94.2
BraA07t30257Z Brassica rapa HOM05D005224 ORTHO05D006372 7.4e-24 113.6 50 96.0
HanXRQChr09g0263651 Helianthus annuus HOM05D005224 ORTHO05D006372 1.6e-23 112.5 52 92.3
MD02G1095800 Malus domestica HOM05D005224 ORTHO05D006372 3.1e-22 108.2 49 91.8
CBR_g52287 Chara braunii HOM05D005224 ORTHO05D006372 7.6e-21 103.6 75 62.7
Mapoly0155s0025 Marchantia polymorpha HOM05D005224 ORTHO05D006372 6.5e-20 100.5 85 58.8
Pp3c11_13470 Physcomitrium patens HOM05D005224 ORTHO05D006372 8.4e-20 100.1 85 56.5
AagrBONN_evm.TU.Sc2ySwM_344.1353 Anthoceros agrestis HOM05D005224 ORTHO05D006372 1.1e-19 99.8 85 58.8
CiPaw.08G095500 Carya illinoinensis HOM05D005224 ORTHO05D006372 3.5e-18 94.7 61 75.4
Pp3c7_20680 Physcomitrium patens HOM05D005224 ORTHO05D006372 3.5e-18 94.7 85 56.5
MCO16G429 Micromonas commoda HOM05D005224 ORTHO05D006372 9.0e-14 80.1 75 50.7
arahy.Tifrunner.gnm1.ann1.YEW5FF Arachis hypogaea HOM05D005224 ORTHO05D006372 2.2e-07 58.9 29 86.2
AUR62015428 Chenopodium quinoa HOM05D005224 ORTHO05D006372 3.1e-06 55.1 23 91.3


User provided reference genes

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