Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 5.2e-69 264.2 132 100.0
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 5.1e-40 167.9 105 73.3
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 4.3e-39 164.9 105 75.2
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 1.3e-38 163.3 105 73.3
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 1.3e-38 163.3 105 74.3
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 1.8e-37 159.5 105 74.3
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 2.4e-37 159.1 110 70.9
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 2.4e-37 159.1 105 74.3
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 4.1e-37 158.3 112 67.0
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 4.1e-37 158.3 105 72.4
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 5.3e-37 157.9 105 71.4
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 6.9e-37 157.5 113 69.9
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 9.0e-37 157.1 105 72.4
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 1.2e-36 156.8 107 72.9
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 1.2e-36 156.8 105 70.5
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 3.4e-36 155.2 105 66.7
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 3.4e-36 155.2 107 69.2
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 4.5e-36 154.8 107 69.2
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 5.9e-36 154.5 105 69.5
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 7.6e-36 154.1 110 66.4
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 1.0e-35 153.7 105 68.6
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 1.3e-35 153.3 104 65.4
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 1.7e-35 152.9 109 68.8
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 1.7e-35 152.9 105 68.6
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 2.2e-35 152.5 107 68.2
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 2.2e-35 152.5 107 68.2
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 2.9e-35 152.1 109 69.7
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 2.9e-35 152.1 105 68.6
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 2.9e-35 152.1 108 66.7
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 3.8e-35 151.8 106 67.0
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 3.8e-35 151.8 105 68.6
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 3.8e-35 151.8 105 67.6
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 5.0e-35 151.4 105 66.7
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 6.5e-35 151.0 114 66.7
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 6.5e-35 151.0 105 68.6
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 8.5e-35 150.6 110 62.7
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 1.1e-34 150.2 101 71.3
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 1.1e-34 150.2 101 71.3
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 1.4e-34 149.8 105 66.7
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 1.4e-34 149.8 105 66.7
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 1.4e-34 149.8 110 69.1
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 1.9e-34 149.4 105 67.6
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 1.9e-34 149.4 110 61.8
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 2.5e-34 149.1 101 70.3
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 2.5e-34 149.1 101 70.3
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 3.2e-34 148.7 106 66.0
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 4.2e-34 148.3 105 65.7
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 4.2e-34 148.3 106 67.9
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 5.5e-34 147.9 106 65.1
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 5.5e-34 147.9 105 63.8
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 5.5e-34 147.9 105 64.8
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 7.2e-34 147.5 105 65.7
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 7.2e-34 147.5 105 63.8
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 9.3e-34 147.1 105 64.8
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 9.3e-34 147.1 104 66.3
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 1.6e-33 146.4 105 68.6
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 2.1e-33 146.0 107 67.3
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 2.7e-33 145.6 105 66.7
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 2.7e-33 145.6 109 60.6
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 4.6e-33 144.8 105 67.6
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 4.6e-33 144.8 104 67.3
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 6.1e-33 144.4 104 66.3
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 6.1e-33 144.4 107 63.6
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 6.1e-33 144.4 104 66.3
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 7.9e-33 144.1 111 59.5
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 7.9e-33 144.1 105 59.0
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 1.0e-32 143.7 104 66.3
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 1.0e-32 143.7 107 63.6
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 1.8e-32 142.9 105 62.9
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 2.3e-32 142.5 105 65.7
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 2.3e-32 142.5 105 64.8
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 2.3e-32 142.5 106 64.2
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 3.0e-32 142.1 104 63.5
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 3.9e-32 141.7 105 62.9
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 5.1e-32 141.4 128 56.2
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 6.7e-32 141.0 105 62.9
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 6.7e-32 141.0 105 64.8
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 1.1e-31 140.2 105 62.9
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 1.1e-31 140.2 105 64.8
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 1.1e-31 140.2 104 59.6
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 1.5e-31 139.8 110 60.9
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 1.9e-31 139.4 110 60.9
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 4.3e-31 138.3 107 60.7
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 5.7e-31 137.9 105 61.9
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 9.7e-31 137.1 107 61.7
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 9.7e-31 137.1 107 60.7
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 9.7e-31 137.1 107 60.7
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 9.7e-31 137.1 107 61.7
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.3e-30 136.7 107 59.8
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 1.7e-30 136.3 107 60.7
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 1.7e-30 136.3 107 59.8
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 2.2e-30 136.0 105 63.8
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 2.8e-30 135.6 144 52.1
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 6.3e-30 134.4 105 61.0
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 2.6e-28 129.0 101 57.4
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 5.0e-27 124.8 101 54.5
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.5e-26 122.5 116 56.0
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 7.2e-26 120.9 101 56.4
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 1.1e-23 113.6 101 50.5
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 1.1e-23 113.6 83 67.5
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.5e-23 113.2 103 59.2
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 2.0e-23 112.8 105 57.1
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 5.7e-23 111.3 83 62.7
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 7.4e-23 110.9 82 67.1
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 1.7e-22 109.8 103 50.5
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 2.2e-22 109.4 91 62.6
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 4.8e-22 108.2 109 52.3
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 1.4e-21 106.7 137 45.3
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 1.0e-19 100.5 83 60.2
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 3.8e-19 98.6 102 48.0
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 2.1e-17 92.8 62 64.5
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 1.0e-16 90.5 116 45.7
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 2.3e-16 89.4 68 55.9
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 1.3e-14 83.6 52 71.2
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 8.5e-11 70.9 104 42.3
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 8.5e-11 70.9 109 38.5
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 7.2e-10 67.8 108 38.9
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 1.2e-07 60.5 41 63.4
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 1.5e-07 60.1 37 78.4
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 3.3e-07 58.9 41 61.0
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 4.4e-07 58.5 56 53.6
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 1.3e-06 57.0 38 68.4
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 2.2e-06 56.2 36 75.0


User provided reference genes

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