Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 1.8e-90 335.9 168 100.0
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 8.5e-48 194.1 168 65.5
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 1.9e-39 166.4 148 64.9
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 1.0e-37 160.6 165 60.0
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 1.1e-36 157.1 190 54.2
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 3.3e-36 155.6 190 54.2
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 3.3e-36 155.6 190 54.2
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 3.1e-34 149.1 183 54.1
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 2.0e-33 146.4 105 72.4
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.0e-33 146.4 103 78.6
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 1.3e-32 143.7 88 83.0
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 6.5e-32 141.4 88 81.8
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 8.5e-32 141.0 88 83.0
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 8.5e-32 141.0 88 83.0
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.1e-31 140.6 88 83.0
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.1e-31 140.6 88 83.0
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 2.5e-31 139.4 88 81.8
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 7.2e-31 137.9 88 79.5
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 9.4e-31 137.5 88 81.8
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 1.2e-30 137.1 88 80.7
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 1.2e-30 137.1 88 80.7
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 2.1e-30 136.3 88 80.7
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 2.7e-30 136.0 88 79.5
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 8.0e-30 134.4 87 80.5
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 8.0e-30 134.4 166 51.8
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 1.4e-29 133.7 166 51.2
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.7e-28 128.3 88 76.1
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 1.8e-26 123.2 79 81.0
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 4.1e-26 122.1 164 50.0
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 9.1e-26 120.9 86 76.7
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.6e-25 120.2 88 75.0
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 4.5e-25 118.6 64 93.8
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 2.9e-24 115.9 70 84.3
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 1.1e-23 114.0 104 63.5
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 1.5e-23 113.6 70 81.4
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 1.5e-23 113.6 70 81.4
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.9e-23 113.2 67 86.6
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.5e-23 112.8 64 90.6
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.5e-23 111.7 85 70.6
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 5.5e-23 111.7 70 80.0
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 7.2e-23 111.3 70 80.0
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 1.6e-22 110.2 70 78.6
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 8.0e-22 107.8 79 72.2
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 1.4e-21 107.1 70 78.6
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 1.8e-21 106.7 141 46.8
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 1.2e-20 104.0 70 77.1
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 4.4e-20 102.1 124 51.6
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 5.7e-20 101.7 56 91.1
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 9.8e-20 100.9 65 80.0
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 4.9e-19 98.6 73 67.1
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 5.4e-18 95.1 54 88.9
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 2.0e-17 93.2 71 71.8
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 1.3e-16 90.5 111 50.5
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 3.8e-16 89.0 65 63.1
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 1.6e-14 83.6 67 61.2
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.8e-13 80.1 157 38.9
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 1.8e-13 80.1 58 72.4
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.8e-13 78.2 46 82.6
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 8.9e-13 77.8 56 75.0
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.5e-12 77.0 62 69.4
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 7.5e-12 74.7 53 73.6
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 9.8e-12 74.3 53 73.6
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 9.8e-12 74.3 53 73.6
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 9.8e-12 74.3 53 73.6
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 9.8e-12 74.3 53 73.6
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 9.8e-12 74.3 53 73.6
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 9.2e-10 67.8 45 75.6
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 1.6e-09 67.0 46 73.9
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 1.6e-09 67.0 57 61.4
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.9e-09 65.1 46 69.6
CSS0042238 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D043359 1.0e-08 64.3 80 53.8
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 6.6e-08 61.6 36 83.3
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 1.5e-07 60.5 40 77.5
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 2.1e-06 56.6 56 62.5


User provided reference genes

Program Settings