Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 3.8e-246 854.4 422 100.0
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.1e-205 719.9 384 93.0
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 3.2e-168 595.5 405 70.6
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 1.2e-167 593.6 379 75.2
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 2.7e-167 592.4 413 72.2
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.0e-166 589.0 410 71.0
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 4.3e-165 585.1 385 72.5
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 2.8e-164 582.4 380 72.9
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.1e-163 580.5 396 72.0
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 9.3e-160 567.4 384 71.9
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 9.3e-160 567.4 374 75.9
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 2.5e-157 559.3 377 70.6
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 7.3e-157 557.8 384 69.8
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 2.4e-155 552.7 377 69.2
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 2.4e-155 552.7 404 68.1
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 5.3e-155 551.6 377 69.0
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 5.3e-155 551.6 384 70.3
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 6.9e-155 551.2 437 61.3
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 4.5e-154 548.5 410 66.6
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 1.3e-153 547.0 409 67.2
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.7e-153 546.6 378 69.8
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 2.2e-153 546.2 409 66.5
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 8.4e-153 544.3 377 70.6
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 1.4e-152 543.5 382 68.1
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 2.4e-152 542.7 394 68.5
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 7.1e-152 541.2 392 69.4
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 9.3e-152 540.8 381 69.6
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 1.2e-151 540.4 384 68.5
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 2.1e-151 539.7 440 63.4
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 2.7e-151 539.3 436 64.2
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 3.5e-151 538.9 394 67.8
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 6.0e-151 538.1 380 69.5
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 6.0e-151 538.1 378 70.6
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 6.0e-151 538.1 396 66.7
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 3.0e-150 535.8 378 69.0
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 6.7e-150 534.6 378 69.3
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.1e-149 533.9 378 68.8
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 1.1e-149 533.9 385 68.1
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 4.3e-149 531.9 394 65.7
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 4.3e-149 531.9 393 66.4
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 5.6e-149 531.6 382 68.3
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 5.6e-149 531.6 403 64.0
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 5.6e-149 531.6 379 69.4
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 1.3e-148 530.4 384 67.2
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 4.8e-148 528.5 385 66.8
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 1.4e-147 526.9 379 67.3
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 4.0e-147 525.4 385 66.5
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 4.0e-147 525.4 379 65.4
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 4.0e-147 525.4 376 66.8
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 2.0e-146 523.1 407 63.9
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 2.6e-146 522.7 379 64.9
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 7.6e-146 521.2 385 67.5
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 1.3e-145 520.4 379 67.5
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 2.9e-145 519.2 379 68.1
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 3.8e-145 518.8 383 66.8
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 4.9e-145 518.5 377 66.0
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 4.9e-145 518.5 384 66.9
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 2.4e-144 516.2 384 67.4
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 5.5e-144 515.0 379 65.7
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.1e-143 513.1 378 66.7
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 4.6e-143 511.9 393 66.2
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 4.6e-143 511.9 393 66.2
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 4.6e-143 511.9 379 64.6
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 7.9e-143 511.1 393 65.9
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 7.9e-143 511.1 379 67.0
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 1.0e-142 510.8 384 66.4
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 1.3e-142 510.4 379 66.5
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 3.3e-141 505.8 402 65.2
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 4.3e-141 505.4 407 61.9
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 7.4e-141 504.6 384 66.1
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 9.6e-141 504.2 384 64.3
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 2.1e-140 503.1 402 64.4
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 4.5e-138 495.4 338 69.5
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 2.5e-136 489.6 355 67.0
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 1.6e-135 486.9 378 64.0
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 6.0e-135 485.0 427 58.3
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 3.9e-134 482.3 377 62.1
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 1.5e-133 480.3 335 69.6
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 2.2e-132 476.5 374 61.8
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.5e-130 470.3 384 58.3
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 1.7e-129 466.8 380 60.3
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 8.5e-129 464.5 405 57.3
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 7.2e-128 461.5 380 59.7
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 2.3e-126 456.4 377 57.6
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.3e-124 450.7 405 57.0
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 1.2e-122 444.1 299 70.6
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 1.5e-122 443.7 410 57.6
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 2.0e-122 443.4 382 56.5
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 2.0e-122 443.4 383 58.2
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 2.0e-122 443.4 379 58.3
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 3.4e-122 442.6 309 68.3
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 6.5e-121 438.3 377 56.0
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 7.9e-119 431.4 429 52.2
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 1.3e-116 424.1 380 58.2
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 1.2e-114 417.5 351 59.3
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 5.9e-114 415.2 391 54.5
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 5.7e-109 398.7 277 67.5
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 8.2e-108 394.8 344 57.0
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 5.3e-107 392.1 409 48.9
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 8.5e-105 384.8 397 51.9
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.8e-102 377.1 300 60.7
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 7.0e-99 365.2 276 64.5
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 3.3e-88 329.7 362 46.1
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 3.7e-84 316.2 309 53.1
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 7.0e-83 312.0 387 43.9
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 9.5e-80 301.6 235 63.0
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 1.0e-78 298.1 227 65.2
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 7.0e-75 285.4 394 39.8
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 7.0e-75 285.4 323 47.1
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 5.2e-70 269.2 405 38.8
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 1.1e-67 261.5 183 68.3
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 2.7e-66 256.9 154 77.3
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 3.9e-65 253.1 183 69.4
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 8.6e-65 251.9 298 45.0
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 8.6e-57 225.3 199 58.3
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 5.6e-56 222.6 208 56.2
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 1.1e-54 218.4 466 31.1
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 7.6e-53 212.2 285 43.9
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 3.8e-52 209.9 156 66.0
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.5e-48 198.0 136 71.3
HPP92_028565 Vanilla planifolia HOM05D000751 ORTHO05D005618 6.2e-47 192.6 160 61.9
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 7.6e-45 185.7 147 64.6
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 2.4e-43 180.6 229 47.6
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 4.8e-39 166.4 151 58.9
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 6.9e-38 162.5 171 52.6
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.5e-29 134.8 118 60.2
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 2.2e-28 131.0 90 65.6
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 4.9e-28 129.8 113 60.2
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 8.4e-28 129.0 196 40.3
COL.COLO4_25459 Corchorus olitorius HOM05D000751 ORTHO05D005618 3.5e-26 123.6 80 71.2
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 4.3e-24 116.7 100 60.0
Aqoxy3G01439 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.4e-24 115.9 92 62.0
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 6.9e-22 109.4 95 63.2
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 3.2e-19 100.5 89 58.4
Nn2g10857 Nelumbo nucifera HOM05D000751 ORTHO05D005618 9.3e-19 99.0 68 69.1
Psat4g182280 Pisum sativum HOM05D000751 ORTHO05D005618 1.3e-17 95.1 56 76.8
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.8e-17 94.7 92 55.4
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 6.7e-17 92.8 112 50.0
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 1.5e-13 81.6 110 44.5
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 2.0e-13 81.3 79 51.9
CAN.G101.3 Capsicum annuum HOM05D000751 ORTHO05D005618 1.4e-11 75.1 80 50.0
Gorai.003G081200 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.7e-10 70.9 45 71.1
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 7.9e-10 69.3 84 50.0
Sopen07g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 4.3e-08 63.5 45 68.9
MD13G1245100 Malus domestica HOM05D000751 ORTHO05D005618 3.1e-06 57.4 43 60.5


User provided reference genes

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