Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3184 Ceratophyllum demersum HOM05D005081 ORTHO05D005506 1.3e-168 596.3 295 100.0
MBI16_g18201_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 3.8e-35 152.9 250 40.0
Actinidia29969 Actinidia chinensis HOM05D005081 ORTHO05D005506 1.7e-30 137.5 247 41.3
GSVIVG01035163001 Vitis vinifera HOM05D005081 ORTHO05D005506 1.4e-29 134.4 247 38.9
Dinv02618 Davidia involucrata HOM05D005081 ORTHO05D005506 4.1e-29 132.9 197 44.7
Lsat_1_v5_gn_7_59220 Lactuca sativa HOM05D005081 ORTHO05D005506 1.5e-28 131.0 244 39.3
TAR383G1035 Trochodendron aralioides HOM05D005081 ORTHO05D005506 3.5e-28 129.8 201 42.8
TAR625G0352 Trochodendron aralioides HOM05D005081 ORTHO05D005506 4.5e-28 129.4 229 40.2
PGR044G2548 Punica granatum HOM05D005081 ORTHO05D005506 5.9e-28 129.0 241 39.0
Rhsim01G0113200 Rhododendron simsii HOM05D005081 ORTHO05D005506 4.7e-25 119.4 223 39.5
QL11p009451 Quercus lobata HOM05D005081 ORTHO05D005506 8.0e-25 118.6 199 42.7
Aqoxy7G02679 Aquilegia oxysepala HOM05D005081 ORTHO05D005506 2.3e-24 117.1 197 42.6
Manes.15G189400 Manihot esculenta HOM05D005081 ORTHO05D005506 2.3e-24 117.1 229 38.9
Actinidia38513 Actinidia chinensis HOM05D005081 ORTHO05D005506 8.8e-24 115.2 189 41.3
PSO063G3463 Papaver somniferum HOM05D005081 ORTHO05D005506 8.8e-24 115.2 205 41.0
MELO3C017390.2 Cucumis melo HOM05D005081 ORTHO05D005506 1.1e-23 114.8 207 39.1
PSO170G2950 Papaver somniferum HOM05D005081 ORTHO05D005506 1.1e-23 114.8 205 41.0
PGSC0003DMG400013692 Solanum tuberosum HOM05D005081 ORTHO05D005506 1.5e-23 114.4 199 41.7
vmacro20793 Vaccinium macrocarpon HOM05D005081 ORTHO05D005506 1.5e-23 114.4 215 39.1
Sc08g0004640 Simmondsia chinensis HOM05D005081 ORTHO05D005506 2.0e-23 114.0 165 43.6
AUR62033253 Chenopodium quinoa HOM05D005081 ORTHO05D005506 2.6e-23 113.6 193 39.4
CsaV3_1G032220 Cucumis sativus L. HOM05D005081 ORTHO05D005506 3.3e-23 113.2 207 38.6
Cpa.g.sc115.44 Carica papaya HOM05D005081 ORTHO05D005506 4.4e-23 112.8 198 38.9
ClCG06G014000 Citrullus lanatus HOM05D005081 ORTHO05D005506 4.4e-23 112.8 253 35.6
Haze_19038 Corylus avellana HOM05D001026 ORTHO05D003027 5.7e-23 112.5 185 43.8
unitig_899.g15188 Utricularia gibba HOM05D005081 ORTHO05D005506 5.7e-23 112.5 201 40.3
MSTRG.10457 Avicennia marina HOM05D005081 ORTHO05D005506 7.4e-23 112.1 203 41.4
AUR62021338 Chenopodium quinoa HOM05D005081 ORTHO05D005506 7.4e-23 112.1 193 38.9
Solyc05g046310.3 Solanum lycopersicum HOM05D005081 ORTHO05D005506 9.7e-23 111.7 199 41.2
Migut.L01903 Erythranthe guttata HOM05D005081 ORTHO05D005506 1.3e-22 111.3 225 37.8
Sopen00g006190 Solanum pennellii HOM05D005081 ORTHO05D005506 1.3e-22 111.3 199 40.7
TWI32G0620 Tripterygium wilfordii HOM05D005081 ORTHO05D005506 1.3e-22 111.3 238 34.0
Nitab4.5_0000833g0060 Nicotiana tabacum HOM05D005081 ORTHO05D005506 2.8e-22 110.2 203 39.4
Cc00_g16170 Coffea canephora HOM05D005081 ORTHO05D005506 4.8e-22 109.4 210 41.0
Eucgr.C02188 Eucalyptus grandis HOM05D005081 ORTHO05D005506 6.3e-22 109.0 251 33.5
Oeu008926.1 Olea europaea HOM05D005081 ORTHO05D005506 1.1e-21 108.2 199 42.7
Nitab4.5_0010835g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 1.8e-21 107.5 199 40.7
CSS0043250 Camellia sinensis var. sinensis HOM05D005081 ORTHO05D005506 4.1e-21 106.3 208 39.4
MBI13_g31561_MAGBIO Magnolia biondii HOM05D005081 ORTHO05D005506 4.1e-21 106.3 191 39.8
SGA_v2.0_scaffold63G21842 Striga asiatica HOM05D005081 ORTHO05D005506 4.1e-21 106.3 200 37.0
Hma1.2p1_0022F.1_g014783 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 7.0e-21 105.5 210 38.1
Hund26317 Selenicereus undatus HOM05D005081 ORTHO05D005506 7.0e-21 105.5 213 36.6
CiPaw.15G154600 Carya illinoinensis HOM05D005081 ORTHO05D005506 9.1e-21 105.1 190 43.7
HPP92_017106 Vanilla planifolia HOM05D005081 ORTHO05D005506 9.1e-21 105.1 220 34.5
Atru.chr12.2077 Acer truncatum HOM05D005081 ORTHO05D005506 1.2e-20 104.8 195 41.5
HPP92_017096 Vanilla planifolia HOM05D005081 ORTHO05D005506 2.0e-20 104.0 220 34.1
HanXRQChr03g0067191 Helianthus annuus HOM05D005081 ORTHO05D005506 2.6e-20 103.6 238 35.7
Oeu044689.1 Olea europaea HOM05D005081 ORTHO05D005506 2.6e-20 103.6 205 37.6
Potri.018G132600 Populus trichocarpa HOM05D005081 ORTHO05D005506 2.6e-20 103.6 203 36.9
MSTRG.26528 Avicennia marina HOM05D005081 ORTHO05D005506 3.5e-20 103.2 198 36.9
Ah.14g083630 Amaranthus hybridus HOM05D005081 ORTHO05D005506 1.3e-19 101.3 196 37.2
FAN12G4058 Fragaria x ananassa HOM05D005081 ORTHO05D005506 2.2e-19 100.5 195 36.9
Nitab4.5_0011475g0010 Nicotiana tabacum HOM05D005081 ORTHO05D005506 2.2e-19 100.5 201 39.3
FvH4_4g06450 Fragaria vesca HOM05D005081 ORTHO05D005506 2.9e-19 100.1 195 36.9
CiPaw.16G103000 Carya illinoinensis HOM05D005081 ORTHO05D005506 3.8e-19 99.8 193 38.9
Sed0028150 Sechium edule HOM05D005081 ORTHO05D005506 3.8e-19 99.8 237 32.5
THA.LOC104815319 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 3.8e-19 99.8 196 37.8
Peaxi162Scf00889g00221 Petunia axillaris HOM05D005081 ORTHO05D005506 5.0e-19 99.4 202 39.6
FAN17G0390 Fragaria x ananassa HOM05D005081 ORTHO05D005506 6.5e-19 99.0 195 36.4
FAN22G0520 Fragaria x ananassa HOM05D005081 ORTHO05D005506 8.5e-19 98.6 190 36.3
Peaxi162Scf00315g00813 Petunia axillaris HOM05D005081 ORTHO05D005506 8.5e-19 98.6 199 37.7
Sed0020945 Sechium edule HOM05D005081 ORTHO05D005506 8.5e-19 98.6 185 38.4
Hund09052 Selenicereus undatus HOM05D005081 ORTHO05D005506 8.5e-19 98.6 228 34.6
Sabra06G0052800 Salix brachista HOM05D005081 ORTHO05D005506 1.5e-18 97.8 205 36.1
ATR0626G171 Amborella trichopoda HOM05D005081 ORTHO05D005506 1.9e-18 97.4 205 39.0
EL10Ac8g18324 Beta vulgaris HOM05D005081 ORTHO05D005506 2.5e-18 97.1 196 34.7
FAN07G0684 Fragaria x ananassa HOM05D005081 ORTHO05D005506 2.5e-18 97.1 195 36.4
RcHm_v2.0_Chr4g0398241 Rosa chinensis HOM05D005081 ORTHO05D005506 3.2e-18 96.7 190 35.8
Thecc.09G189400 Theobroma cacao HOM05D005081 ORTHO05D005506 5.5e-18 95.9 191 35.6
Duzib170G0058 Durio zibethinus HOM05D005081 ORTHO05D005506 9.4e-18 95.1 189 36.0
Ah.09g230120 Amaranthus hybridus HOM05D005081 ORTHO05D005506 1.2e-17 94.7 202 34.2
ECA234G2314 Erigeron canadensis HOM05D005081 ORTHO05D005506 4.7e-17 92.8 238 32.4
ECA240G1118 Erigeron canadensis HOM05D005081 ORTHO05D005506 6.1e-17 92.4 225 37.3
Cc10_g11560 Coffea canephora HOM05D005081 ORTHO05D005506 1.0e-16 91.7 207 38.6
Gohir.A05G408500 Gossypium hirsutum HOM05D005081 ORTHO05D005506 1.8e-16 90.9 196 34.7
THA.LOC104826579 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 2.3e-16 90.5 223 31.4
HanXRQChr10g0303491 Helianthus annuus HOM05D005081 ORTHO05D005506 3.0e-16 90.1 242 32.6
Gorai.012G008600 Gossypium raimondii HOM05D005081 ORTHO05D005506 5.2e-16 89.4 196 35.2
Potri.006G070900 Populus trichocarpa HOM05D005081 ORTHO05D005506 5.2e-16 89.4 206 35.0
Zm00001eb208100 Zea mays HOM05D005081 ORTHO05D005506 5.2e-16 89.4 189 34.4
Gohir.D04G006900 Gossypium hirsutum HOM05D005081 ORTHO05D005506 6.8e-16 89.0 196 34.2
CANSAT80G2033 Cannabis sativa HOM05D005081 ORTHO05D005506 8.8e-16 88.6 207 30.9
AL7G44130 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 1.2e-15 88.2 196 34.7
MD13G1236100 Malus domestica HOM05D005081 ORTHO05D005506 5.7e-15 85.9 199 34.7
THA.LOC104808906 Tarenaya hassleriana HOM05D005081 ORTHO05D005506 5.7e-15 85.9 197 32.5
TPR.G25464 Trifolium pratense HOM05D005081 ORTHO05D005506 5.7e-15 85.9 185 34.6
Medtr8g101480 Medicago truncatula HOM05D005081 ORTHO05D005506 9.7e-15 85.1 201 36.8
Os02g0141500 Oryza sativa ssp. japonica HOM05D005081 ORTHO05D005506 9.7e-15 85.1 239 31.4
CARHR217350 Cardamine hirsuta HOM05D005081 ORTHO05D005506 2.2e-14 84.0 224 34.4
Nitab4.5_0000053g0180 Nicotiana tabacum HOM05D005081 ORTHO05D005506 2.2e-14 84.0 201 36.8
arahy.Tifrunner.gnm1.ann1.TAK2NC Arachis hypogaea HOM05D005081 ORTHO05D005506 6.3e-14 82.4 187 34.2
Duzib168G1013 Durio zibethinus HOM05D005081 ORTHO05D005506 8.3e-14 82.0 190 32.1
AT5G35320 Arabidopsis thaliana HOM05D005081 ORTHO05D005506 1.1e-13 81.6 185 33.5
arahy.Tifrunner.gnm1.ann1.FV9V0P Arachis hypogaea HOM05D005081 ORTHO05D005506 1.1e-13 81.6 201 33.8
Aa31LG4G14880 Aethionema arabicum HOM05D005081 ORTHO05D005506 1.8e-13 80.9 206 33.0
Sp3g25120 Schrenkiella parvula HOM05D005081 ORTHO05D005506 1.8e-13 80.9 218 32.1
Actinidia31880 Actinidia chinensis HOM05D005081 ORTHO05D005506 3.1e-13 80.1 208 36.1
Ca_17410_v3 Cicer arietinum L. HOM05D005081 ORTHO05D005506 3.1e-13 80.1 194 33.0
AL3G43930 Arabidopsis lyrata HOM05D005081 ORTHO05D005506 7.0e-13 79.0 201 33.3
Thhalv10003466m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 7.0e-13 79.0 184 32.6
SalBow6G6882 Salvia bowleyana HOM05D005081 ORTHO05D005506 7.0e-13 79.0 196 33.2
Sabra18G0112300 Salix brachista HOM05D005081 ORTHO05D005506 1.2e-12 78.2 193 33.7
Ciclev10012648m.g Citrus clementina HOM05D005081 ORTHO05D005506 2.7e-12 77.0 203 33.5
MD15G1102900 Malus domestica HOM05D005081 ORTHO05D005506 3.5e-12 76.6 233 29.2
Carub.0007s3114 Capsella rubella HOM05D005081 ORTHO05D005506 4.5e-12 76.3 208 34.6
Prupe.1G067800 Prunus persica HOM05D005081 ORTHO05D005506 4.5e-12 76.3 201 33.8
Lj4g0023825 Lotus japonicus HOM05D005081 ORTHO05D005506 5.9e-12 75.9 195 33.3
Psat7g022000 Pisum sativum HOM05D005081 ORTHO05D005506 5.9e-12 75.9 158 34.8
A03p44750 Brassica napus HOM05D005081 ORTHO05D005506 7.7e-12 75.5 216 29.2
Carub.0003s2733 Capsella rubella HOM05D005081 ORTHO05D005506 1.3e-11 74.7 194 34.0
BraA03t13610Z Brassica rapa HOM05D005081 ORTHO05D005506 1.7e-11 74.3 216 28.7
DCAR_019825 Daucus carota HOM05D005081 ORTHO05D005506 1.1e-10 71.6 203 31.5
Hma1.2p1_0022F.1_g014780 Hydrangea macrophylla HOM05D005081 ORTHO05D005506 2.5e-10 70.5 198 32.3
MD16G1241100 Malus domestica HOM05D005081 ORTHO05D005506 5.5e-10 69.3 125 39.2
VMungo0251G2709 Vigna mungo HOM05D005081 ORTHO05D005506 5.5e-10 69.3 179 30.7
Glyma.05G221800 Glycine max HOM05D005081 ORTHO05D005506 1.4e-08 64.7 177 30.5
CARHR103910 Cardamine hirsuta HOM05D005081 ORTHO05D005506 2.3e-08 63.9 153 32.0
FvH4_2g36450 Fragaria vesca HOM05D026897 ORTHO05D005506 4.0e-08 63.2 164 29.9
Lalb_Chr05g0223691 Lupinus albus HOM05D005081 ORTHO05D005506 4.0e-08 63.2 190 29.5
Phvul.002G303500 Phaseolus vulgaris HOM05D005081 ORTHO05D005506 5.2e-08 62.8 178 29.2
FAN27G3206 Fragaria x ananassa HOM05D026897 ORTHO05D005506 1.5e-07 61.2 164 29.3
HPP92_018333 Vanilla planifolia HOM05D005081 ORTHO05D005506 2.0e-07 60.8 114 36.0
FAN15G2850 Fragaria x ananassa HOM05D026897 ORTHO05D005506 2.2e-06 57.4 164 28.7
Lalb_Chr11g0064261 Lupinus albus HOM05D005081 ORTHO05D005506 2.8e-06 57.0 191 30.9
BcaB08g34509 Brassica carinata HOM05D005081 ORTHO05D005506 6.3e-06 55.8 38 63.2
Glyma.08G028300 Glycine max HOM05D005081 ORTHO05D005506 6.3e-06 55.8 189 29.1


User provided reference genes

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