Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3137 Ceratophyllum demersum HOM05D008537 ORTHO05D010652 4.0e-251 870.9 427 100.0
Gorai.001G167800 Gossypium raimondii HOM05D008537 ORTHO05D010652 5.1e-81 305.8 253 67.6
RcHm_v2.0_MTg0499151 Rosa chinensis HOM05D008537 ORTHO05D010652 3.3e-80 303.1 195 80.0
SabraMtG0006100 Salix brachista HOM05D008537 ORTHO05D010652 7.3e-80 302.0 195 79.5
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 1.6e-66 257.7 219 65.3
CsaV3_UNG209980 Cucumis sativus L. HOM05D008537 ORTHO05D010652 6.9e-54 215.7 112 93.8
Solyc00g500112.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 2.6e-53 213.8 112 92.9
Solyc00g500256.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 2.6e-53 213.8 112 92.9
arahy.Tifrunner.gnm1.ann1.PZS5LY Arachis hypogaea HOM05D008537 ORTHO05D010652 7.7e-53 212.2 214 61.7
arahy.Tifrunner.gnm1.ann1.DJ3Y2L Arachis hypogaea HOM05D008537 ORTHO05D010652 1.7e-52 211.1 210 61.9
TPR.G35334 Trifolium pratense HOM05D008537 ORTHO05D010652 2.5e-51 207.2 135 80.7
Ah.10g028020 Amaranthus hybridus HOM05D008537 ORTHO05D010652 5.5e-51 206.1 112 91.1
Ca_27707_v3 Cicer arietinum L. HOM05D008537 ORTHO05D010652 2.1e-50 204.1 117 86.3
arahy.Tifrunner.gnm1.ann1.75TDV4 Arachis hypogaea HOM05D008537 ORTHO05D010652 8.8e-49 198.7 134 76.1
Actinidia34884 Actinidia chinensis HOM05D008537 ORTHO05D010652 4.3e-48 196.4 134 76.1
LjContig00439g0010598 Lotus japonicus HOM05D008537 ORTHO05D010652 1.5e-40 171.4 152 65.8
LjContig00446g0012519 Lotus japonicus HOM05D008537 ORTHO05D010652 1.5e-40 171.4 152 65.8
CARHR287170 Cardamine hirsuta HOM05D008537 ORTHO05D010652 9.7e-40 168.7 116 79.3
SEGI_04170 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.3e-39 168.3 198 51.5
SEGI_18574 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.3e-39 168.3 198 51.5
Aa31csc464G100 Aethionema arabicum HOM05D008537 ORTHO05D010652 6.3e-39 166.0 98 84.7
Lalb_Chr00c51g0413211 Lupinus albus HOM05D008537 ORTHO05D010652 8.2e-39 165.6 112 79.5
SEGI_08781 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 4.1e-38 163.3 162 56.8
Glyma.17G185800 Glycine max HOM05D008537 ORTHO05D010652 5.0e-36 156.4 168 58.3
Solyc11g030915.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 5.7e-32 142.9 145 57.2
BolSC28t60361H Brassica oleracea HOM05D008537 ORTHO05D010652 2.8e-31 140.6 121 68.6
BraSC177t45759Z Brassica rapa HOM05D008537 ORTHO05D010652 2.8e-31 140.6 121 68.6
BraSC48t46348Z Brassica rapa HOM05D008537 ORTHO05D010652 2.8e-31 140.6 121 68.6
C01p34740 Brassica napus HOM05D008537 ORTHO05D010652 8.8e-25 119.0 98 67.3
EL10Ac5g12180 Beta vulgaris HOM05D008537 ORTHO05D010652 7.5e-24 115.9 112 57.1
SGA_v2.0_scaffold420G51364 Striga asiatica HOM05D008537 ORTHO05D010652 5.4e-22 109.8 73 75.3
CDE02G3677 Ceratophyllum demersum HOM05D008537 ORTHO05D129214 2.1e-18 97.8 175 46.3
Mapoly3683s0001 Marchantia polymorpha HOM05D008537 ORTHO05D010652 8.0e-18 95.9 77 64.9
ATR1126G003 Amborella trichopoda HOM05D008537 ORTHO05D010652 2.4e-14 84.3 49 85.7
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 9.8e-08 62.4 101 32.7
SHI26665 Sapria himalayana HOM05D008537 ORTHO05D010652 8.3e-07 59.3 35 77.1


User provided reference genes

Program Settings