Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3093 Ceratophyllum demersum HOM05D040943 ORTHO05D000769 2.5e-222 775.0 354 100.0
CDE02G0810 Ceratophyllum demersum HOM05D040943 ORTHO05D000769 5.5e-89 332.0 172 84.3
CDE08G0372 Ceratophyllum demersum HOM05D040943 ORTHO05D000769 2.3e-71 273.5 172 69.8
PSO170G6606 Papaver somniferum HOM05D000790 ORTHO05D000769 2.1e-19 100.9 156 34.6
CANSAT25G0773 Cannabis sativa HOM05D000790 ORTHO05D000769 7.3e-17 92.4 154 33.1
CANSAT25G2677 Cannabis sativa HOM05D000790 ORTHO05D000769 1.2e-16 91.7 154 31.8
Eucgr.F03223 Eucalyptus grandis HOM05D000790 ORTHO05D000769 1.6e-16 91.3 156 31.4
Ciclev10033328m.g Citrus clementina HOM05D000790 ORTHO05D000769 9.0e-15 85.5 164 30.5
Duzib248G1363 Durio zibethinus HOM05D000790 ORTHO05D000769 1.2e-14 85.1 154 30.5
PGR031G1828 Punica granatum HOM05D000790 ORTHO05D000769 1.2e-14 85.1 154 31.2
Atru.chr5.3590 Acer truncatum HOM05D000790 ORTHO05D000769 3.4e-14 83.6 155 29.0
DCAR_022085 Daucus carota HOM05D000790 ORTHO05D000769 9.9e-14 82.0 157 31.8
Sed0013577 Sechium edule HOM05D000790 ORTHO05D000769 9.9e-14 82.0 154 28.6
Sed0018399 Sechium edule HOM05D000790 ORTHO05D000769 1.7e-13 81.3 144 28.5
RcHm_v2.0_Chr6g0281581 Rosa chinensis HOM05D000790 ORTHO05D000769 2.9e-13 80.5 144 31.9
AUR62013211 Chenopodium quinoa HOM05D000790 ORTHO05D000769 3.8e-13 80.1 155 29.0
FvH4_2g17140 Fragaria vesca HOM05D000790 ORTHO05D000769 3.8e-13 80.1 145 31.7
FAN15G1228 Fragaria x ananassa HOM05D000790 ORTHO05D000769 3.8e-13 80.1 145 31.7
FAN24G0258 Fragaria x ananassa HOM05D000790 ORTHO05D000769 3.8e-13 80.1 145 31.7
CsaV3_5G026580 Cucumis sativus L. HOM05D000790 ORTHO05D000769 4.9e-13 79.7 174 28.7
FAN27G1479 Fragaria x ananassa HOM05D000790 ORTHO05D000769 4.9e-13 79.7 145 31.7
Lsat_1_v5_gn_9_65520 Lactuca sativa HOM05D000790 ORTHO05D000769 4.9e-13 79.7 163 27.6
ClCG09G017900 Citrullus lanatus HOM05D000790 ORTHO05D000769 8.4e-13 79.0 162 27.2
Ciclev10032506m.g Citrus clementina HOM05D000790 ORTHO05D000769 1.1e-12 78.6 171 29.2
Nn2g10386 Nelumbo nucifera HOM05D000790 ORTHO05D000769 1.1e-12 78.6 164 30.5
Nn6g31580 Nelumbo nucifera HOM05D000790 ORTHO05D000769 1.4e-12 78.2 144 29.2
Sed0027975 Sechium edule HOM05D000790 ORTHO05D000769 1.4e-12 78.2 201 28.4
TAR381G1234 Trochodendron aralioides HOM05D000790 ORTHO05D000769 1.4e-12 78.2 144 27.8
ClCG02G010740 Citrullus lanatus HOM05D000790 ORTHO05D000769 2.4e-12 77.4 144 27.8
CsaV3_6G009970 Cucumis sativus L. HOM05D000790 ORTHO05D000769 3.2e-12 77.0 144 27.8
Sed0027448 Sechium edule HOM05D000790 ORTHO05D000769 3.2e-12 77.0 164 27.4
ECA234G1737 Erigeron canadensis HOM05D000790 ORTHO05D000769 4.2e-12 76.6 168 28.6
MELO3C013478.2 Cucumis melo HOM05D000790 ORTHO05D000769 5.4e-12 76.3 144 27.8
Rhsim03G0054600 Rhododendron simsii HOM05D000790 ORTHO05D000769 5.4e-12 76.3 173 27.7
Gorai.011G260000 Gossypium raimondii HOM05D000790 ORTHO05D000769 7.1e-12 75.9 175 27.4
QL07p043969 Quercus lobata HOM05D000790 ORTHO05D000769 7.1e-12 75.9 175 29.7
Migut.F01291 Erythranthe guttata HOM05D000790 ORTHO05D000769 1.2e-11 75.1 170 30.6
MELO3C003164.2 Cucumis melo HOM05D000790 ORTHO05D000769 1.6e-11 74.7 175 31.4
PGR142G0838 Punica granatum HOM05D000790 ORTHO05D000769 1.6e-11 74.7 146 30.1
Gohir.A10G218300 Gossypium hirsutum HOM05D000790 ORTHO05D000769 2.1e-11 74.3 168 26.8
Gohir.D10G227600 Gossypium hirsutum HOM05D000790 ORTHO05D000769 2.7e-11 73.9 168 27.4
Ciclev10003469m.g Citrus clementina HOM05D000125 ORTHO05D009513 7.8e-11 72.4 272 22.8
MELO3C021638.2 Cucumis melo HOM05D000790 ORTHO05D000769 7.8e-11 72.4 162 26.5
MELO3C021637.2 Cucumis melo HOM05D000790 ORTHO05D000769 1.3e-10 71.6 161 28.0
Nitab4.5_0003098g0090 Nicotiana tabacum HOM05D000790 ORTHO05D000769 1.3e-10 71.6 209 28.2
ClCG09G019820 Citrullus lanatus HOM05D000790 ORTHO05D000769 1.7e-10 71.2 156 32.7
Lj1A359T19 Lonicera japonica HOM05D000125 ORTHO05D000120 1.7e-10 71.2 235 27.7
Oeu053769.1 Olea europaea HOM05D000790 ORTHO05D000769 2.3e-10 70.9 190 25.8
Sed0009268 Sechium edule HOM05D000790 ORTHO05D000769 2.3e-10 70.9 157 27.4
HanXRQChr08g0209911 Helianthus annuus HOM05D000125 ORTHO05D000120 3.9e-10 70.1 347 23.6
Ciclev10027368m.g Citrus clementina HOM05D000125 ORTHO05D000807 6.6e-10 69.3 245 29.0
Thhalv10017531m.g Eutrema salsugineum HOM05D000790 ORTHO05D000769 6.6e-10 69.3 198 26.3
Duzib128G1286 Durio zibethinus HOM05D000790 ORTHO05D000769 8.7e-10 68.9 218 23.9
PGSC0003DMG400008815 Solanum tuberosum HOM05D000790 ORTHO05D000769 8.7e-10 68.9 209 28.7
Migut.J00283 Erythranthe guttata HOM05D000790 ORTHO05D000769 1.1e-09 68.6 200 25.0
MELO3C033575.2 Cucumis melo HOM05D000790 ORTHO05D000769 1.5e-09 68.2 170 28.8
Gorai.005G007100 Gossypium raimondii HOM05D000125 ORTHO05D000120 1.9e-09 67.8 271 26.2
CsaV3_5G026620 Cucumis sativus L. HOM05D000790 ORTHO05D000769 2.5e-09 67.4 170 28.8
BcaB02g09242 Brassica carinata HOM05D000790 ORTHO05D000769 3.3e-09 67.0 198 25.3
COL.COLO4_16601 Corchorus olitorius HOM05D000125 ORTHO05D000120 3.3e-09 67.0 308 20.5
CsaV3_5G026590 Cucumis sativus L. HOM05D000790 ORTHO05D000769 3.3e-09 67.0 149 26.2
Lj3A963T61 Lonicera japonica HOM05D000790 ORTHO05D000769 3.3e-09 67.0 144 27.8
A05p08120 Brassica napus HOM05D000790 ORTHO05D000769 4.3e-09 66.6 198 25.3
BraA05t19780Z Brassica rapa HOM05D000790 ORTHO05D000769 4.3e-09 66.6 198 25.3
COL.COLO4_10016 Corchorus olitorius HOM05D001429 ORTHO05D001420 4.3e-09 66.6 288 22.2
Peaxi162Scf00318g00089 Petunia axillaris HOM05D000790 ORTHO05D000769 5.6e-09 66.2 203 28.1
QL06p021440 Quercus lobata HOM05D000062 ORTHO05D000043 5.6e-09 66.2 127 29.1
ATR0559G069 Amborella trichopoda HOM05D000790 ORTHO05D000769 9.6e-09 65.5 152 27.6
Migut.F01292 Erythranthe guttata HOM05D000790 ORTHO05D000769 9.6e-09 65.5 188 27.1
Gohir.A02G006200 Gossypium hirsutum HOM05D000125 ORTHO05D000120 9.6e-09 65.5 248 25.4
Gohir.A02G006400 Gossypium hirsutum HOM05D000125 ORTHO05D000120 9.6e-09 65.5 248 25.4
Gohir.A02G006600 Gossypium hirsutum HOM05D000125 ORTHO05D000120 9.6e-09 65.5 248 25.4
THA.LOC104807012 Tarenaya hassleriana HOM05D000790 ORTHO05D000769 9.6e-09 65.5 162 27.8
ClCG09G019800 Citrullus lanatus HOM05D000790 ORTHO05D000769 1.3e-08 65.1 156 27.6
CsaV3_5G026610 Cucumis sativus L. HOM05D000790 ORTHO05D000769 1.3e-08 65.1 172 28.5
MELO3C021640.2 Cucumis melo HOM05D000790 ORTHO05D000769 1.6e-08 64.7 149 26.2
Thecc.05G032100 Theobroma cacao HOM05D000790 ORTHO05D000769 1.6e-08 64.7 151 27.8
SalBow6G2472 Salvia bowleyana HOM05D000790 ORTHO05D000769 2.8e-08 63.9 147 27.2
Carub.0004s1974 Capsella rubella HOM05D000790 ORTHO05D000769 3.6e-08 63.5 198 25.8
Ciclev10023780m.g Citrus clementina HOM05D000125 ORTHO05D000120 3.6e-08 63.5 276 23.6
Nn3g19438 Nelumbo nucifera HOM05D000790 ORTHO05D000769 3.6e-08 63.5 158 27.8
Gohir.D01G033900 Gossypium hirsutum HOM05D000125 ORTHO05D009513 4.8e-08 63.2 258 23.3
Manes.07G115500 Manihot esculenta HOM05D000790 ORTHO05D000769 4.8e-08 63.2 160 24.4
Medtr7g025130 Medicago truncatula HOM05D000790 ORTHO05D000769 4.8e-08 63.2 158 27.8
Aa31LG11G5750 Aethionema arabicum HOM05D000125 ORTHO05D000120 6.2e-08 62.8 356 23.9
PSO339G2536 Papaver somniferum HOM05D000790 ORTHO05D000769 1.8e-07 61.2 249 25.3
Sed0008458 Sechium edule HOM05D000790 ORTHO05D000769 1.8e-07 61.2 152 25.7
Aa31LG2G10380 Aethionema arabicum HOM05D000790 ORTHO05D000769 2.4e-07 60.8 189 25.9
Haze_17078 Corylus avellana HOM05D000790 ORTHO05D000769 2.4e-07 60.8 194 24.7
Dinv42100 Davidia involucrata HOM05D000790 ORTHO05D000769 3.1e-07 60.5 106 28.3
PSO339G4072 Papaver somniferum HOM05D000790 ORTHO05D000769 3.1e-07 60.5 163 27.6
Sed0014886 Sechium edule HOM05D000790 ORTHO05D000769 3.1e-07 60.5 170 24.1
Zm00001eb168930 Zea mays HOM05D000790 ORTHO05D000769 4.0e-07 60.1 147 28.6
HanXRQChr13g0390451 Helianthus annuus HOM05D000125 ORTHO05D000807 5.3e-07 59.7 161 23.6
THA.LOC104826413 Tarenaya hassleriana HOM05D000125 ORTHO05D000807 5.3e-07 59.7 165 26.7
Carub.0007s2741 Capsella rubella HOM05D000125 ORTHO05D000120 6.9e-07 59.3 353 23.2
FAN09G2829 Fragaria x ananassa HOM05D000125 ORTHO05D000807 6.9e-07 59.3 198 23.7
PSO339G2964 Papaver somniferum HOM05D000790 ORTHO05D000769 6.9e-07 59.3 197 25.4
Carub.0004s0087 Capsella rubella HOM05D000125 ORTHO05D009513 9.0e-07 58.9 229 23.1
Lsat_1_v5_gn_6_80861 Lactuca sativa HOM05D000125 ORTHO05D000120 9.0e-07 58.9 243 23.5
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 1.2e-06 58.5 237 23.6
PSO017G2758 Papaver somniferum HOM05D000790 ORTHO05D000769 1.2e-06 58.5 77 37.7
Gohir.A01G043400 Gossypium hirsutum HOM05D000125 ORTHO05D009513 1.5e-06 58.2 274 22.3
EL10Ac9g21446 Beta vulgaris HOM05D000790 ORTHO05D000769 2.0e-06 57.8 112 30.4
EL10Ac9g21567 Beta vulgaris HOM05D000790 ORTHO05D000769 2.0e-06 57.8 120 28.3
TAR633G1124 Trochodendron aralioides HOM05D002354 ORTHO05D002469 2.0e-06 57.8 139 26.6
PGR044G1440 Punica granatum HOM05D018416 ORTHO05D000769 2.6e-06 57.4 175 26.3
Ciclev10030893m.g Citrus clementina HOM05D000062 ORTHO05D000043 3.4e-06 57.0 163 27.0
PGR044G2088 Punica granatum HOM05D018416 ORTHO05D000769 3.4e-06 57.0 174 27.0
SEGI_14876 Sequoiadendron giganteum HOM05D000790 ORTHO05D000769 3.4e-06 57.0 142 29.6
AL4G11160 Arabidopsis lyrata HOM05D000125 ORTHO05D009513 4.5e-06 56.6 171 25.7
Gorai.002G041400 Gossypium raimondii HOM05D000125 ORTHO05D009513 4.5e-06 56.6 274 22.3
Peaxi162Scf00318g00920 Petunia axillaris HOM05D000790 ORTHO05D000769 4.5e-06 56.6 166 27.7
AT2G19660 Arabidopsis thaliana HOM05D000125 ORTHO05D000120 5.8e-06 56.2 350 23.4
Migut.F01293 Erythranthe guttata HOM05D000790 ORTHO05D000769 5.8e-06 56.2 156 27.6
Manes.08G043350 Manihot esculenta HOM05D000125 ORTHO05D000807 5.8e-06 56.2 215 23.7
ClCG04G007840 Citrullus lanatus HOM05D000790 ORTHO05D000769 7.6e-06 55.8 133 27.8
QL06p021472 Quercus lobata HOM05D000062 ORTHO05D000043 9.9e-06 55.5 96 28.1


User provided reference genes

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