Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 4.8e-175 617.8 342 100.0
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.1e-145 520.4 342 83.6
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 5.6e-46 189.1 272 44.5
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 4.1e-41 172.9 283 41.3
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.0e-40 170.6 324 38.3
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 3.0e-39 166.8 389 35.0
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 1.5e-38 164.5 303 39.6
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.5e-38 164.5 271 42.8
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 4.3e-38 162.9 262 43.1
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 1.2e-37 161.4 283 40.6
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.2e-37 161.4 288 40.3
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 2.1e-37 160.6 356 42.1
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.8e-37 160.2 279 39.8
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 8.9e-36 155.2 278 38.5
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 1.2e-35 154.8 273 37.7
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.0e-35 154.1 360 38.6
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 9.8e-35 151.8 364 38.2
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 8.3e-34 148.7 275 36.7
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 8.3e-34 148.7 370 38.4
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 4.1e-33 146.4 391 35.3
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 6.0e-32 142.5 265 37.0
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 7.8e-32 142.1 368 37.8
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 7.8e-32 142.1 368 37.8
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.0e-31 141.7 359 34.5
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 1.0e-31 141.7 346 37.6
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 1.7e-31 141.0 392 32.4
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 2.3e-31 140.6 370 37.6
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 2.3e-31 140.6 406 32.8
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 3.0e-31 140.2 300 36.0
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 3.9e-31 139.8 361 37.7
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 5.1e-31 139.4 363 36.6
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 5.1e-31 139.4 293 35.2
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 8.6e-31 138.7 380 35.0
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 8.6e-31 138.7 378 35.4
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-30 137.9 285 34.4
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.9e-30 137.5 342 35.4
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 4.3e-30 136.3 378 35.2
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 9.5e-30 135.2 359 35.4
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 9.5e-30 135.2 416 34.1
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.2e-29 134.8 346 37.0
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.2e-29 134.8 345 38.3
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 1.6e-29 134.4 265 37.0
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 1.6e-29 134.4 328 31.7
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 2.1e-29 134.0 354 33.3
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 2.1e-29 134.0 288 37.2
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 3.6e-29 133.3 346 36.7
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 3.6e-29 133.3 305 34.1
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 4.7e-29 132.9 321 34.3
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 8.1e-29 132.1 379 32.7
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 1.1e-28 131.7 370 35.4
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 1.1e-28 131.7 347 33.7
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 1.4e-28 131.3 362 32.9
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 1.4e-28 131.3 377 30.0
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 1.8e-28 131.0 383 37.1
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 2.3e-28 130.6 380 35.8
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 2.3e-28 130.6 375 34.1
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 3.1e-28 130.2 370 32.2
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 4.0e-28 129.8 275 40.7
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 6.8e-28 129.0 342 31.0
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 6.8e-28 129.0 324 34.0
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 8.9e-28 128.6 276 34.1
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 8.9e-28 128.6 362 36.7
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 1.2e-27 128.3 377 32.9
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 2.6e-27 127.1 371 31.5
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 4.4e-27 126.3 361 35.7
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 7.5e-27 125.6 345 31.0
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.3e-26 124.8 354 37.3
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 2.2e-26 124.0 353 35.4
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 4.9e-26 122.9 426 31.9
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.4e-25 120.6 376 32.7
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 4.1e-25 119.8 324 33.0
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 7.1e-25 119.0 384 32.6
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 7.1e-25 119.0 324 35.5
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 9.2e-25 118.6 340 35.3
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 1.2e-24 118.2 361 34.6
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.7e-24 117.1 370 34.1
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 3.5e-24 116.7 316 33.5
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 4.6e-24 116.3 359 32.0
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 7.8e-24 115.5 344 35.8
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.7e-23 114.4 307 36.5
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 3.0e-23 113.6 218 32.6
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 3.9e-23 113.2 291 30.2
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 8.6e-23 112.1 265 36.6
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 8.6e-23 112.1 347 34.6
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.5e-22 111.3 302 34.1
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.9e-22 110.9 315 35.2
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 2.5e-22 110.5 355 31.3
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 9.5e-22 108.6 355 33.2
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.1e-20 105.1 356 32.3
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 8.9e-20 102.1 251 31.5
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.4e-19 99.8 203 33.5
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 1.7e-18 97.8 101 48.5
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 3.8e-18 96.7 96 50.0
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 4.9e-18 96.3 363 31.7
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 1.4e-17 94.7 408 27.9
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.9e-17 94.4 96 47.9
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.4e-17 94.0 299 30.8
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 2.4e-17 94.0 92 48.9
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 2.4e-17 94.0 269 35.7
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 3.2e-17 93.6 99 45.5
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 3.2e-17 93.6 99 45.5
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 5.4e-17 92.8 311 32.5
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 7.1e-17 92.4 339 32.2
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 9.2e-17 92.0 91 47.3
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 1.2e-16 91.7 92 50.0
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 3.5e-16 90.1 103 45.6
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 2.3e-15 87.4 103 43.7
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 3.9e-15 86.7 95 44.2
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 8.7e-15 85.5 171 34.5
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 3.3e-14 83.6 207 29.5
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.8e-13 80.5 181 31.5
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 6.2e-13 79.3 251 35.5
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 7.6e-11 72.4 87 41.4
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 4.9e-10 69.7 94 35.1
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.1e-09 68.6 105 40.0
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 1.7e-07 61.2 199 38.7
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.7e-07 61.2 50 50.0
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 5.1e-07 59.7 111 45.9
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 5.1e-07 59.7 44 59.1
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 1.9e-06 57.8 98 35.7
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 1.9e-06 57.8 87 37.9
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.9e-06 57.8 262 30.5
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 2.5e-06 57.4 80 41.2
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 9.6e-06 55.5 92 32.6


User provided reference genes

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