Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3039 Ceratophyllum demersum HOM05D004034 ORTHO05D004210 2.5e-49 199.9 275 100.0
TAR627G0011 Trochodendron aralioides HOM05D004034 ORTHO05D004210 5.3e-15 85.9 77 58.4
Prupe.3G169100 Prunus persica HOM05D004034 ORTHO05D004210 3.6e-11 73.2 77 51.9
Nn3g21007 Nelumbo nucifera HOM05D004034 ORTHO05D004210 1.1e-09 68.2 76 53.9
Aqoxy1G01912 Aquilegia oxysepala HOM05D004034 ORTHO05D004210 2.0e-09 67.4 71 50.7
FAN09G1783 Fragaria x ananassa HOM05D004034 ORTHO05D004210 2.0e-09 67.4 78 52.6
FAN02G3754 Fragaria x ananassa HOM05D004034 ORTHO05D004210 9.7e-09 65.1 75 53.3
FAN05G2656 Fragaria x ananassa HOM05D004034 ORTHO05D004210 9.7e-09 65.1 75 53.3
MBI06_g08520_MAGBIO Magnolia biondii HOM05D004034 ORTHO05D004210 9.7e-09 65.1 54 61.1
RcHm_v2.0_Chr2g0150831 Rosa chinensis HOM05D004034 ORTHO05D004210 9.7e-09 65.1 78 52.6
FvH4_6g37770 Fragaria vesca HOM05D004034 ORTHO05D004210 1.7e-08 64.3 75 53.3
FAN14G2402 Fragaria x ananassa HOM05D004034 ORTHO05D004210 1.7e-08 64.3 75 53.3
Eucgr.A01957 Eucalyptus grandis HOM05D004034 ORTHO05D004210 2.2e-08 63.9 54 59.3
MD17G1142500 Malus domestica HOM05D004034 ORTHO05D004210 2.2e-08 63.9 80 47.5
Nitab4.5_0002027g0120 Nicotiana tabacum HOM05D004034 ORTHO05D000735 2.8e-08 63.5 78 47.4
Dinv12713 Davidia involucrata HOM05D004034 ORTHO05D004210 3.7e-08 63.2 74 52.7
MSTRG.6767 Avicennia marina HOM05D004034 ORTHO05D004210 4.8e-08 62.8 54 57.4
Dinv02649 Davidia involucrata HOM05D004034 ORTHO05D004210 4.8e-08 62.8 73 50.7
Nitab4.5_0001402g0080 Nicotiana tabacum HOM05D004034 ORTHO05D004210 4.8e-08 62.8 78 47.4
MD09G1156200 Malus domestica HOM05D004034 ORTHO05D004210 8.2e-08 62.0 76 47.4
Ciclev10018355m.g Citrus clementina HOM05D004034 ORTHO05D004210 1.1e-07 61.6 78 44.9
Duzib147G0894 Durio zibethinus HOM05D004034 ORTHO05D004210 1.4e-07 61.2 77 48.1
TWI59G0196 Tripterygium wilfordii HOM05D004034 ORTHO05D004210 1.4e-07 61.2 75 46.7
Actinidia04672 Actinidia chinensis HOM05D004034 ORTHO05D004210 1.8e-07 60.8 72 45.8
COL.COLO4_33708 Corchorus olitorius HOM05D004034 ORTHO05D004210 4.1e-07 59.7 75 44.0
DCAR_021304 Daucus carota HOM05D004034 ORTHO05D004210 4.1e-07 59.7 77 44.2
Peaxi162Scf00035g00315 Petunia axillaris HOM05D004034 ORTHO05D004210 5.3e-07 59.3 77 48.1
CSS0017431 Camellia sinensis var. sinensis HOM05D004034 ORTHO05D004210 7.0e-07 58.9 53 64.2
CSS0041707 Camellia sinensis var. sinensis HOM05D004034 ORTHO05D004210 7.0e-07 58.9 53 64.2
Thecc.01G158900 Theobroma cacao HOM05D004034 ORTHO05D004210 9.1e-07 58.5 53 56.6
Oeu020935.1 Olea europaea HOM05D004034 ORTHO05D004210 1.2e-06 58.2 70 50.0
Actinidia11188 Actinidia chinensis HOM05D000176 ORTHO05D000106 2.0e-06 57.4 52 57.7
ClCG02G018270 Citrullus lanatus HOM05D004034 ORTHO05D004210 2.0e-06 57.4 54 50.0
Nitab4.5_0001121g0120 Nicotiana tabacum HOM05D004034 ORTHO05D004210 2.0e-06 57.4 55 60.0
GSVIVG01000818001 Vitis vinifera HOM05D000176 ORTHO05D000106 2.0e-06 57.4 54 55.6
SalBow7G3865 Salvia bowleyana HOM05D000115 ORTHO05D005317 2.7e-06 57.0 53 54.7
HPP92_024445 Vanilla planifolia HOM05D004034 ORTHO05D004210 3.5e-06 56.6 78 38.5
Cc05_g09180 Coffea canephora HOM05D004034 ORTHO05D004210 4.5e-06 56.2 74 45.9
ATR0213G033 Amborella trichopoda HOM05D004034 ORTHO05D004210 5.9e-06 55.8 57 50.9
QL08p043585 Quercus lobata HOM05D004034 ORTHO05D004210 7.7e-06 55.5 78 48.7


User provided reference genes

Program Settings