Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G3007 Ceratophyllum demersum HOM05D004564 ORTHO05D006106 5.9e-80 300.8 154 100.0
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 1.3e-58 229.9 152 75.0
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 2.9e-58 228.8 154 72.1
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 2.9e-58 228.8 152 75.0
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 1.6e-56 223.0 153 74.5
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 1.6e-56 223.0 153 72.5
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 1.6e-56 223.0 153 72.5
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 2.0e-56 222.6 153 71.9
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 2.0e-56 222.6 152 72.4
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 2.0e-56 222.6 154 71.4
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 2.7e-56 222.2 152 72.4
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 3.5e-56 221.9 153 71.9
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 7.8e-56 220.7 152 72.4
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 1.0e-55 220.3 153 72.5
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 2.9e-55 218.8 148 73.0
Lj1A591G26 Lonicera japonica HOM05D004564 ORTHO05D006106 5.0e-55 218.0 152 72.4
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 6.6e-55 217.6 152 70.4
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.5e-54 216.5 152 70.4
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 2.5e-54 215.7 152 68.4
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 5.6e-54 214.5 153 67.3
Psat2g017120 Pisum sativum HOM05D004564 ORTHO05D006106 9.5e-54 213.8 152 69.1
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.2e-53 213.4 152 70.4
Lj1g0025808 Lotus japonicus HOM05D004564 ORTHO05D006106 1.6e-53 213.0 152 67.8
GSVIVG01013077001 Vitis vinifera HOM05D004564 ORTHO05D006106 2.8e-53 212.2 153 69.9
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 3.6e-53 211.8 152 69.7
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 8.0e-53 210.7 146 71.9
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 8.0e-53 210.7 152 67.1
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.0e-52 210.3 153 65.4
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 4.0e-52 208.4 153 68.0
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 8.9e-52 207.2 150 70.0
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 8.9e-52 207.2 152 68.4
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 8.9e-52 207.2 152 67.8
vmacro08736 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 2.0e-51 206.1 152 67.8
FAN02G2671 Fragaria x ananassa HOM05D004564 ORTHO05D006106 2.6e-51 205.7 152 67.1
Os12g0626300 Oryza sativa ssp. japonica HOM05D004564 ORTHO05D006106 9.8e-51 203.8 152 66.4
Lalb_Chr10g0106581 Lupinus albus HOM05D004564 ORTHO05D006106 2.2e-50 202.6 148 66.2
Nitab4.5_0000508g0020 Nicotiana tabacum HOM05D004564 ORTHO05D006106 4.9e-50 201.4 152 67.8
Ciclev10030760m.g Citrus clementina HOM05D004564 ORTHO05D006106 6.4e-50 201.1 154 67.5
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 8.3e-50 200.7 147 66.0
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 1.1e-49 200.3 152 67.1
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 1.1e-49 200.3 152 66.4
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 1.6e-48 196.4 144 67.4
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 2.7e-48 195.7 152 63.8
Hund26665 Selenicereus undatus HOM05D004564 ORTHO05D006106 3.5e-48 195.3 152 61.8
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 1.0e-47 193.7 144 66.0
MBI18_g13604_MAGBIO Magnolia biondii HOM05D004564 ORTHO05D006106 1.3e-47 193.4 151 64.2
Atru.chr6.2044 Acer truncatum HOM05D004564 ORTHO05D006106 3.0e-47 192.2 152 63.8
Sc06g0007580 Simmondsia chinensis HOM05D004564 ORTHO05D006106 5.0e-47 191.4 147 63.9
Zm00001eb128180 Zea mays HOM05D004564 ORTHO05D006106 6.6e-47 191.0 152 62.5
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 1.1e-46 190.3 152 63.2
unitig_37.g12587 Utricularia gibba HOM05D004564 ORTHO05D006106 1.1e-46 190.3 152 61.2
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 1.5e-46 189.9 152 64.5
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 2.5e-46 189.1 150 65.3
HanXRQChr10g0292821 Helianthus annuus HOM05D004564 ORTHO05D006106 4.3e-46 188.3 152 62.5
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 5.6e-46 188.0 190 53.2
SHI30099 Sapria himalayana HOM05D004564 ORTHO05D006106 7.3e-46 187.6 144 63.9
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 1.2e-45 186.8 144 65.3
COL.COLO4_38399 Corchorus olitorius HOM05D004564 ORTHO05D006106 2.8e-45 185.7 152 63.2
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 3.6e-45 185.3 152 60.5
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 3.6e-45 185.3 153 62.1
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 6.2e-45 184.5 152 61.2
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 6.2e-45 184.5 152 60.5
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 1.4e-44 183.3 152 59.9
EL10Ac1g01740 Beta vulgaris HOM05D004564 ORTHO05D006106 1.8e-44 183.0 150 60.7
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 1.8e-44 183.0 152 59.9
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 6.8e-44 181.0 152 59.2
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 6.8e-44 181.0 152 61.2
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 6.8e-44 181.0 152 59.2
BcaNung07074 Brassica carinata HOM05D004564 ORTHO05D006106 1.2e-43 180.3 148 63.5
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 1.2e-43 180.3 148 63.5
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 1.5e-43 179.9 152 58.6
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 4.4e-43 178.3 152 58.6
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 5.8e-43 177.9 152 58.6
AUR62022316 Chenopodium quinoa HOM05D004564 ORTHO05D006106 5.8e-43 177.9 150 60.0
MD17G1134700 Malus domestica HOM05D004564 ORTHO05D006106 5.8e-43 177.9 160 59.4
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 7.5e-43 177.6 148 62.2
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 7.5e-43 177.6 150 59.3
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 7.5e-43 177.6 152 59.9
Peaxi162Scf00922g00318 Petunia axillaris HOM05D004564 ORTHO05D006106 1.3e-42 176.8 135 67.4
Eucgr.A02026 Eucalyptus grandis HOM05D004564 ORTHO05D006106 2.9e-42 175.6 152 61.2
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 6.4e-42 174.5 148 62.2
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 1.4e-41 173.3 148 61.5
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 1.4e-41 173.3 152 59.2
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 1.4e-41 173.3 147 59.9
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 1.9e-41 172.9 147 61.9
CARHR006200 Cardamine hirsuta HOM05D004564 ORTHO05D006106 1.9e-41 172.9 147 61.2
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 4.1e-41 171.8 147 59.9
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 7.1e-41 171.0 148 60.1
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 9.2e-41 170.6 147 61.2
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 1.2e-40 170.2 147 61.2
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 2.1e-40 169.5 147 59.9
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 1.0e-39 167.2 146 60.3
SEGI_14916 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 3.0e-39 165.6 152 54.6
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 2.5e-38 162.5 147 57.8
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 2.5e-38 162.5 147 57.8
ATR0763G133 Amborella trichopoda HOM05D004564 ORTHO05D006106 1.2e-37 160.2 146 54.8
Glyma.02G284500 Glycine max HOM05D004564 ORTHO05D006106 1.2e-37 160.2 152 53.9
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 2.1e-37 159.5 147 57.8
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 2.1e-37 159.5 147 57.8
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 1.4e-36 156.8 146 54.1
Pp3c3_33140 Physcomitrium patens HOM05D004564 ORTHO05D006106 2.9e-34 149.1 146 52.1
TAR626G0994 Trochodendron aralioides HOM05D004564 ORTHO05D006106 2.9e-34 149.1 101 70.3
CAN.G3149.1 Capsicum annuum HOM05D004564 ORTHO05D006106 6.0e-32 141.4 103 68.9
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 6.0e-32 141.4 103 68.9
Mapoly0007s0190 Marchantia polymorpha HOM05D004564 ORTHO05D006106 5.1e-31 138.3 143 45.5
Nitab4.5_0004346g0010 Nicotiana tabacum HOM05D004564 ORTHO05D006106 6.6e-31 137.9 103 67.0
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 8.6e-31 137.5 107 64.5
AagrBONN_evm.TU.Sc2ySwM_228.5505 Anthoceros agrestis HOM05D004564 ORTHO05D006106 7.3e-30 134.4 140 44.3
SMO174G0184 Selaginella moellendorffii HOM05D004564 ORTHO05D006106 1.2e-29 133.7 140 44.3
Ah.05g168440 Amaranthus hybridus HOM05D004564 ORTHO05D006106 5.8e-27 124.8 131 48.1
CBR_g44342 Chara braunii HOM05D000019 ORTHO05D000353 9.3e-25 117.5 137 43.8
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 2.1e-24 116.3 80 72.5
Zm00001eb370760 Zea mays HOM05D004564 ORTHO05D006106 6.6e-15 84.7 57 71.9
HPP92_001867 Vanilla planifolia HOM05D004564 ORTHO05D006106 7.4e-06 54.7 137 29.2


User provided reference genes

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