Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2928 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 0.0e+00 1815.8 1130 100.0
MBI02_g39755_MAGBIO Magnolia biondii HOM05D004529 ORTHO05D005884 8.3e-38 163.7 254 40.6
TAR627G0950 Trochodendron aralioides HOM05D004529 ORTHO05D005884 1.6e-33 149.4 242 38.4
Psat0s1805g0040 Pisum sativum HOM05D004529 ORTHO05D005884 2.8e-33 148.7 196 42.3
arahy.Tifrunner.gnm1.ann1.FEKM9F Arachis hypogaea HOM05D004529 ORTHO05D005884 7.5e-31 140.6 196 40.8
Haze_13045 Corylus avellana HOM05D004529 ORTHO05D005884 2.2e-30 139.0 237 33.8
arahy.Tifrunner.gnm1.ann1.1UV8VN Arachis hypogaea HOM05D004529 ORTHO05D005884 3.7e-30 138.3 196 40.3
Lalb_Chr22g0354001 Lupinus albus HOM05D004529 ORTHO05D005884 1.8e-29 136.0 221 36.7
Cfa014497 Carpinus fangiana HOM05D004529 ORTHO05D005884 2.4e-29 135.6 237 35.0
Cfa014498 Carpinus fangiana HOM05D004529 ORTHO05D005884 2.4e-29 135.6 237 35.0
Medtr6g077930 Medicago truncatula HOM05D004529 ORTHO05D005884 7.0e-29 134.0 273 34.1
MD17G1087100 Malus domestica HOM05D004529 ORTHO05D005884 9.2e-29 133.7 231 33.8
Lj9P411T44 Lonicera japonica HOM05D004529 ORTHO05D005884 2.7e-28 132.1 201 38.3
VMungo0464G0747 Vigna mungo HOM05D004529 ORTHO05D005884 3.5e-28 131.7 292 34.6
Lalb_Chr14g0370211 Lupinus albus HOM05D004529 ORTHO05D005884 7.8e-28 130.6 210 37.1
Lalb_Chr24g0398601 Lupinus albus HOM05D004529 ORTHO05D005884 1.0e-27 130.2 212 37.7
Glyma.16G212800 Glycine max HOM05D004529 ORTHO05D005884 1.3e-27 129.8 227 36.1
Glyma.09G164300 Glycine max HOM05D004529 ORTHO05D005884 1.7e-27 129.4 226 36.7
QL10p034152 Quercus lobata HOM05D004529 ORTHO05D005884 2.3e-27 129.0 253 33.2
Lj5A167G40 Lonicera japonica HOM05D004529 ORTHO05D005884 2.9e-27 128.6 191 36.6
Phvul.004G138850 Phaseolus vulgaris HOM05D004529 ORTHO05D005884 2.9e-27 128.6 298 32.2
Phvul.L001671 Phaseolus vulgaris HOM05D004529 ORTHO05D005884 2.9e-27 128.6 298 32.2
Lj2g0011080 Lotus japonicus HOM05D004529 ORTHO05D005884 3.8e-27 128.3 220 39.1
PSO675G1505 Papaver somniferum HOM05D004529 ORTHO05D005884 3.8e-27 128.3 226 37.6
MBI03_g26653_MAGBIO Magnolia biondii HOM05D004529 ORTHO05D005884 5.0e-27 127.9 227 34.8
PSO541G4256 Papaver somniferum HOM05D004529 ORTHO05D005884 6.6e-27 127.5 226 37.2
Prupe.3G227600 Prunus persica HOM05D004529 ORTHO05D005884 6.6e-27 127.5 264 31.4
Sabra04G0046400 Salix brachista HOM05D004529 ORTHO05D005884 1.1e-26 126.7 267 31.5
VMungo0464G1978 Vigna mungo HOM05D004529 ORTHO05D005884 1.5e-26 126.3 287 33.4
Nitab4.5_0003040g0050 Nicotiana tabacum HOM05D004529 ORTHO05D005884 1.9e-26 125.9 228 35.1
CAN.G929.20 Capsicum annuum HOM05D004529 ORTHO05D005884 3.3e-26 125.2 227 34.4
Gohir.A13G153800 Gossypium hirsutum HOM05D004529 ORTHO05D005884 4.3e-26 124.8 193 38.3
Gorai.013G179100 Gossypium raimondii HOM05D004529 ORTHO05D005884 5.6e-26 124.4 193 38.3
Atru.chr6.3093 Acer truncatum HOM05D004529 ORTHO05D005884 9.5e-26 123.6 203 38.4
Gohir.D13G158400 Gossypium hirsutum HOM05D004529 ORTHO05D005884 9.5e-26 123.6 193 38.3
Nitab4.5_0000339g0110 Nicotiana tabacum HOM05D004529 ORTHO05D005884 9.5e-26 123.6 229 36.2
Lj9P233T36 Lonicera japonica HOM05D004529 ORTHO05D005884 1.2e-25 123.2 201 36.8
PGSC0003DMG400010150 Solanum tuberosum HOM05D004529 ORTHO05D005884 1.2e-25 123.2 228 34.2
Solyc03g098630.4 Solanum lycopersicum HOM05D004529 ORTHO05D005884 1.6e-25 122.9 228 35.1
FAN09G3058 Fragaria x ananassa HOM05D004529 ORTHO05D005884 2.1e-25 122.5 209 38.3
vmacro17741 Vaccinium macrocarpon HOM05D004529 ORTHO05D005884 3.6e-25 121.7 252 32.1
GSVIVG01024252001 Vitis vinifera HOM05D004529 ORTHO05D005884 3.6e-25 121.7 273 33.3
FAN14G2835 Fragaria x ananassa HOM05D004529 ORTHO05D005884 4.7e-25 121.3 195 41.0
ATR0618G236 Amborella trichopoda HOM05D004529 ORTHO05D005884 6.1e-25 120.9 224 35.3
Potri.004G068700 Populus trichocarpa HOM05D004529 ORTHO05D005884 6.1e-25 120.9 266 35.0
PGR083G0180 Punica granatum HOM05D004529 ORTHO05D005884 6.1e-25 120.9 273 32.2
Nitab4.5_0000782g0040 Nicotiana tabacum HOM05D004529 ORTHO05D005884 8.0e-25 120.6 228 34.6
COL.COLO4_08720 Corchorus olitorius HOM05D004529 ORTHO05D005884 1.4e-24 119.8 233 34.3
FAN02G0641 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.4e-24 119.8 209 37.3
Ca_27163_v3 Cicer arietinum L. HOM05D004529 ORTHO05D005884 1.8e-24 119.4 182 37.9
Duzib177G0816 Durio zibethinus HOM05D004529 ORTHO05D005884 1.8e-24 119.4 257 33.5
Ciclev10018551m.g Citrus clementina HOM05D004529 ORTHO05D005884 2.3e-24 119.0 264 32.2
MBI06_g11152_MAGBIO Magnolia biondii HOM05D004529 ORTHO05D005884 2.3e-24 119.0 227 33.9
CDE05G3012 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 3.0e-24 118.6 259 32.8
RcHm_v2.0_Chr2g0161201 Rosa chinensis HOM05D004529 ORTHO05D005884 3.0e-24 118.6 237 35.9
Sabra17G0125600 Salix brachista HOM05D004529 ORTHO05D005884 3.0e-24 118.6 205 36.1
TAR371G0876 Trochodendron aralioides HOM05D004529 ORTHO05D005884 3.0e-24 118.6 271 32.5
Cpa.g.sc34.61 Carica papaya HOM05D040545 ORTHO05D005884 4.0e-24 118.2 196 39.3
FvH4_6g44320 Fragaria vesca HOM05D004529 ORTHO05D005884 4.0e-24 118.2 209 37.8
Sopen03g029340 Solanum pennellii HOM05D004529 ORTHO05D005884 4.0e-24 118.2 228 34.2
Duzib128G0682 Durio zibethinus HOM05D004529 ORTHO05D005884 6.8e-24 117.5 229 35.4
Potri.017G152601 Populus trichocarpa HOM05D004529 ORTHO05D005884 8.9e-24 117.1 206 35.4
Rhsim08G0124700 Rhododendron simsii HOM05D004529 ORTHO05D005884 8.9e-24 117.1 249 32.5
FAN05G1920 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.5e-23 116.3 204 37.3
TAR629G2105 Trochodendron aralioides HOM05D004529 ORTHO05D005884 1.5e-23 116.3 321 28.3
Haze_18337 Corylus avellana HOM05D004529 ORTHO05D005884 2.0e-23 115.9 237 33.8
Peaxi162Scf00171g00234 Petunia axillaris HOM05D004529 ORTHO05D005884 2.0e-23 115.9 224 35.7
Actinidia34683 Actinidia chinensis HOM05D004529 ORTHO05D005884 2.6e-23 115.5 235 31.5
CDE08G0908 Ceratophyllum demersum HOM05D004529 ORTHO05D005884 2.6e-23 115.5 215 35.8
TAR629G0199 Trochodendron aralioides HOM05D004529 ORTHO05D005884 2.6e-23 115.5 322 28.3
CAN.G65.75 Capsicum annuum HOM05D004529 ORTHO05D005884 5.7e-23 114.4 219 33.3
Dinv06405 Davidia involucrata HOM05D004529 ORTHO05D005884 5.7e-23 114.4 233 32.6
Dinv11730 Davidia involucrata HOM05D004529 ORTHO05D005884 5.7e-23 114.4 236 31.8
Nitab4.5_0000033g0370 Nicotiana tabacum HOM05D004529 ORTHO05D005884 5.7e-23 114.4 229 33.2
Atru.chr9.71 Acer truncatum HOM05D004529 ORTHO05D005884 7.5e-23 114.0 202 38.1
CSS0033935 Camellia sinensis var. sinensis HOM05D004529 ORTHO05D005884 9.8e-23 113.6 223 34.1
Dinv02574 Davidia involucrata HOM05D004529 ORTHO05D005884 1.3e-22 113.2 232 34.1
RcHm_v2.0_Chr7g0177041 Rosa chinensis HOM05D004529 ORTHO05D005884 3.7e-22 111.7 194 36.6
Thecc.02G167600 Theobroma cacao HOM05D004529 ORTHO05D005884 3.7e-22 111.7 295 31.5
PSO782G2500 Papaver somniferum HOM05D004529 ORTHO05D005884 4.9e-22 111.3 218 33.0
PSO063G4972 Papaver somniferum HOM05D004529 ORTHO05D005884 1.4e-21 109.8 218 33.9
Thecc.05G197800 Theobroma cacao HOM05D004529 ORTHO05D005884 1.4e-21 109.8 190 35.3
Eucgr.H00653 Eucalyptus grandis HOM05D004529 ORTHO05D005884 5.4e-21 107.8 286 31.5
Potri.013G149400 Populus trichocarpa HOM05D004529 ORTHO05D005884 7.0e-21 107.5 249 32.9
CANSAT64G3027 Cannabis sativa HOM05D004529 ORTHO05D005884 1.2e-20 106.7 225 33.8
DCAR_011683 Daucus carota HOM05D004529 ORTHO05D005884 1.2e-20 106.7 215 33.5
Prupe.5G240600 Prunus persica HOM05D004529 ORTHO05D005884 1.6e-20 106.3 244 31.6
Gohir.A13G089790 Gossypium hirsutum HOM05D004529 ORTHO05D005884 2.0e-20 105.9 235 32.3
Sc21g0002170 Simmondsia chinensis HOM05D004529 ORTHO05D005884 2.0e-20 105.9 283 31.8
FvH4_5g18430 Fragaria vesca HOM05D004529 ORTHO05D005884 2.7e-20 105.5 191 34.6
FAN18G1654 Fragaria x ananassa HOM05D004529 ORTHO05D005884 2.7e-20 105.5 191 34.6
MD14G1242900 Malus domestica HOM05D004529 ORTHO05D005884 3.5e-20 105.1 291 29.6
FAN08G1550 Fragaria x ananassa HOM05D004529 ORTHO05D005884 7.8e-20 104.0 191 34.0
FAN13G3043 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.0e-19 103.6 231 32.0
Sopen06g028620 Solanum pennellii HOM05D004529 ORTHO05D005884 1.0e-19 103.6 200 36.5
Sopen06g028600 Solanum pennellii HOM05D004529 ORTHO05D005884 1.7e-19 102.8 200 36.5
FAN08G2030 Fragaria x ananassa HOM05D004529 ORTHO05D005884 3.9e-19 101.7 231 32.0
MD06G1235900 Malus domestica HOM05D004529 ORTHO05D005884 3.9e-19 101.7 290 28.6
Gohir.D13G093200 Gossypium hirsutum HOM05D004529 ORTHO05D005884 6.6e-19 100.9 233 34.3
RcHm_v2.0_Chr7g0177561 Rosa chinensis HOM05D004529 ORTHO05D005884 6.6e-19 100.9 231 31.6
Cpa.g.sc168.9 Carica papaya HOM05D004529 ORTHO05D005884 8.6e-19 100.5 219 32.9
Peaxi162Scf00643g00541 Petunia axillaris HOM05D004529 ORTHO05D005884 8.6e-19 100.5 123 39.0
Phvul.004G138800 Phaseolus vulgaris HOM05D004529 ORTHO05D005884 1.1e-18 100.1 182 33.5
GSVIVG01029323001 Vitis vinifera HOM05D004529 ORTHO05D005884 1.1e-18 100.1 218 31.7
FAN04G1556 Fragaria x ananassa HOM05D004529 ORTHO05D005884 1.9e-18 99.4 233 31.3
Potri.019G119100 Populus trichocarpa HOM05D004529 ORTHO05D005884 2.5e-18 99.0 170 38.2
TWI81G0141 Tripterygium wilfordii HOM05D004529 ORTHO05D005884 2.5e-18 99.0 237 32.5
FAN13G2071 Fragaria x ananassa HOM05D004529 ORTHO05D005884 3.3e-18 98.6 191 33.0
Sed0013312 Sechium edule HOM05D004529 ORTHO05D005884 5.6e-18 97.8 227 33.5
FvH4_5g18040 Fragaria vesca HOM05D004529 ORTHO05D005884 7.3e-18 97.4 233 30.5
Cpa.g.sc34.58 Carica papaya HOM05D004529 ORTHO05D005884 1.2e-17 96.7 130 40.0
HPP92_022512 Vanilla planifolia HOM05D004529 ORTHO05D001371 2.8e-17 95.5 219 30.6
FAN18G3802 Fragaria x ananassa HOM05D004529 ORTHO05D005884 3.6e-17 95.1 225 30.7
Zm00001eb271850 Zea mays HOM05D004529 ORTHO05D005884 8.0e-17 94.0 200 32.0
PGSC0003DMG400045819 Solanum tuberosum HOM05D004529 ORTHO05D005884 1.4e-16 93.2 179 38.0
Hund01213 Selenicereus undatus HOM05D004529 ORTHO05D005884 1.8e-16 92.8 231 30.7
ClCG01G014790 Citrullus lanatus HOM05D004529 ORTHO05D005884 5.2e-16 91.3 243 30.9
Zm00001eb198730 Zea mays HOM05D004529 ORTHO05D005884 8.9e-16 90.5 209 31.6
CsaV3_1G007540 Cucumis sativus L. HOM05D004529 ORTHO05D005884 2.0e-15 89.4 226 32.7
Sabra19G0119700 Salix brachista HOM05D004529 ORTHO05D005884 2.0e-15 89.4 170 33.5
Sabra19G0134300 Salix brachista HOM05D004529 ORTHO05D005884 2.6e-15 89.0 170 33.5
Sabra19G0119900 Salix brachista HOM05D004529 ORTHO05D005884 1.3e-14 86.7 170 32.9
TPR.G19877 Trifolium pratense HOM05D004529 ORTHO05D005884 1.3e-14 86.7 130 39.2
Sabra19G0134100 Salix brachista HOM05D004529 ORTHO05D005884 2.2e-14 85.9 170 32.9
Nitab4.5_0011808g0010 Nicotiana tabacum HOM05D004529 ORTHO05D005884 4.9e-14 84.7 88 40.9
Os06g0729500 Oryza sativa ssp. japonica HOM05D004529 ORTHO05D005884 1.1e-13 83.6 208 29.3
Dinv02572 Davidia involucrata HOM05D004529 ORTHO05D005884 9.2e-13 80.5 98 40.8
MELO3C002172.2 Cucumis melo HOM05D004529 ORTHO05D005884 3.5e-12 78.6 121 40.5
RcHm_v2.0_Chr1g0318131 Rosa chinensis HOM05D004529 ORTHO05D005884 3.5e-12 78.6 102 39.2
FAN04G0338 Fragaria x ananassa HOM05D004529 ORTHO05D005884 5.0e-11 74.7 189 29.6
Mapoly0005s0070 Marchantia polymorpha HOM05D004529 ORTHO05D000444 8.6e-11 73.9 246 25.2
Ciclev10018263m.g Citrus clementina HOM05D004529 ORTHO05D005884 4.3e-10 71.6 212 29.7
Lalb_Chr21g0309401 Lupinus albus HOM05D000608 ORTHO05D000444 4.4e-07 61.6 163 29.4
Cfa014501 Carpinus fangiana HOM05D004529 ORTHO05D005884 4.9e-06 58.2 93 31.2


User provided reference genes

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