Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 7.6e-222 773.5 378 100.0
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 4.2e-127 458.8 380 60.3
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 1.0e-125 454.1 378 60.8
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 3.6e-123 445.7 374 57.2
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 2.0e-121 439.9 353 60.6
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 4.5e-121 438.7 352 61.9
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 1.8e-117 426.8 324 61.7
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 1.8e-117 426.8 318 62.6
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.3e-117 426.4 351 59.5
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 3.0e-117 426.0 324 61.4
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 6.7e-117 424.9 345 57.7
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 8.7e-117 424.5 346 58.4
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 8.7e-117 424.5 355 58.9
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 8.7e-117 424.5 318 61.9
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.9e-116 423.3 342 60.5
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 1.9e-116 423.3 355 58.6
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 1.3e-115 420.6 337 59.1
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 1.6e-115 420.2 343 59.8
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 6.2e-115 418.3 328 61.6
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 6.2e-115 418.3 348 58.6
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 6.2e-115 418.3 324 58.6
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 8.1e-115 417.9 363 57.0
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 1.1e-114 417.5 342 59.1
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.8e-114 416.8 328 60.4
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 4.0e-114 415.6 380 56.1
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 5.3e-114 415.2 335 60.9
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 6.9e-114 414.8 351 57.0
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 6.9e-114 414.8 327 62.1
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 1.2e-113 414.1 321 60.7
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.2e-113 414.1 321 61.1
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.2e-113 414.1 364 56.3
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 1.2e-113 414.1 351 58.1
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 1.5e-113 413.7 373 55.2
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 2.0e-113 413.3 347 56.8
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.6e-113 412.9 325 59.7
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 2.6e-113 412.9 356 57.9
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 2.6e-113 412.9 353 56.4
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 5.8e-113 411.8 349 57.9
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 9.9e-113 411.0 352 56.5
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 1.3e-112 410.6 394 53.6
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 2.2e-112 409.8 354 56.5
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 2.2e-112 409.8 351 57.0
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 2.2e-112 409.8 351 56.1
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 2.9e-112 409.5 319 61.4
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 3.8e-112 409.1 354 56.5
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 1.1e-111 407.5 351 56.7
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 1.1e-111 407.5 324 61.1
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.4e-111 407.1 357 56.3
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 2.4e-111 406.4 325 59.7
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 3.2e-111 406.0 350 56.6
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 4.2e-111 405.6 347 56.2
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 4.2e-111 405.6 348 58.6
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 5.5e-111 405.2 325 59.4
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 7.1e-111 404.8 332 60.2
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 9.3e-111 404.4 342 57.3
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 1.2e-110 404.1 304 61.8
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.2e-110 404.1 324 59.3
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 2.7e-110 402.9 356 56.5
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 2.7e-110 402.9 341 57.2
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 4.6e-110 402.1 340 57.6
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 4.6e-110 402.1 322 60.6
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 6.0e-110 401.7 332 58.4
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 7.9e-110 401.4 344 57.0
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 3.9e-109 399.1 321 58.9
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 5.1e-109 398.7 353 56.1
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.5e-108 397.1 356 56.5
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 1.5e-108 397.1 356 54.2
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.9e-108 396.7 371 55.8
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 2.5e-108 396.4 351 53.6
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 3.3e-108 396.0 330 58.8
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 4.3e-108 395.6 280 64.6
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 1.3e-107 394.0 326 58.6
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.6e-107 393.7 345 55.9
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 6.2e-107 391.7 401 52.9
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 8.1e-107 391.3 345 56.5
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 3.1e-106 389.4 350 56.0
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 9.0e-106 387.9 337 55.5
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 1.2e-105 387.5 293 61.8
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.6e-105 386.3 361 55.1
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.0e-104 384.4 312 59.0
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 6.5e-104 381.7 367 51.5
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 1.4e-103 380.6 337 56.4
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 1.2e-102 377.5 370 54.3
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 1.3e-101 374.0 315 58.1
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 2.3e-101 373.2 354 55.6
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 5.1e-101 372.1 284 61.6
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 9.6e-100 367.9 375 51.5
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 1.6e-99 367.1 366 53.3
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 1.6e-99 367.1 367 53.4
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 3.7e-99 365.9 348 53.4
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 2.1e-94 350.1 259 64.1
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 1.0e-93 347.8 253 66.0
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.9e-92 343.6 339 53.1
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.3e-91 340.9 363 51.5
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 2.9e-88 329.7 278 55.0
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.1e-87 327.8 321 51.1
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 1.9e-87 327.0 264 59.8
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 4.4e-84 315.8 328 47.3
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 5.9e-81 305.4 352 47.4
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 2.1e-78 297.0 470 36.8
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 5.9e-73 278.9 238 55.0
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 2.9e-72 276.6 248 57.7
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 3.2e-71 273.1 464 34.5
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 5.5e-71 272.3 318 46.2
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 2.1e-70 270.4 255 51.4
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.1e-70 270.4 291 50.5
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 4.4e-68 262.7 199 60.8
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 5.9e-65 252.3 312 44.6
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.2e-64 250.4 304 44.7
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 1.5e-63 247.7 216 55.1
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 1.2e-60 238.0 224 51.8
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 1.8e-58 230.7 349 37.8
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.8e-53 214.2 190 55.3
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 2.0e-49 200.7 388 35.8
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 1.5e-47 194.5 156 59.0
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.6e-46 191.0 164 58.5
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 1.4e-45 188.0 171 55.0
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 1.7e-43 181.0 127 63.0
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-42 178.3 124 67.7
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 7.0e-42 175.6 124 67.7
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.7e-40 171.0 492 27.8
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 9.5e-39 165.2 360 32.2
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.1e-34 151.8 123 55.3
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 1.4e-34 151.4 111 67.6
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 1.7e-27 127.9 121 54.5
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 3.3e-23 113.6 85 61.2
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 5.2e-21 106.3 154 44.2
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 7.1e-18 95.9 66 66.7
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 2.7e-17 94.0 60 71.7
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 3.2e-10 70.5 245 28.6
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 7.3e-07 59.3 56 51.8
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 8.1e-06 55.8 119 31.9


User provided reference genes

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