Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2837 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 8.3e-188 660.2 334 100.0
CDE05G0441 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 4.5e-149 531.6 276 96.7
MBI18_g24142_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 3.7e-135 485.3 339 72.0
TAR636G3090 Trochodendron aralioides HOM05D004037 ORTHO05D004744 1.7e-132 476.5 321 74.1
Nn3g17600 Nelumbo nucifera HOM05D004037 ORTHO05D004744 1.1e-131 473.8 332 70.8
Aqoxy2G03110 Aquilegia oxysepala HOM05D004037 ORTHO05D004744 7.9e-130 467.6 276 82.2
Nitab4.5_0000245g0260 Nicotiana tabacum HOM05D004037 ORTHO05D004744 1.6e-127 459.9 279 79.6
PGSC0003DMG400028592 Solanum tuberosum HOM05D004037 ORTHO05D004744 4.8e-127 458.4 284 77.8
Actinidia39245 Actinidia chinensis HOM05D004037 ORTHO05D004744 2.4e-126 456.1 308 72.4
CAN.G134.227 Capsicum annuum HOM05D004037 ORTHO05D004744 3.1e-126 455.7 298 74.8
Cc03_g11000 Coffea canephora HOM05D004037 ORTHO05D004744 5.3e-126 454.9 284 77.1
Solyc01g098380.4 Solanum lycopersicum HOM05D004037 ORTHO05D004744 9.0e-126 454.1 283 77.0
GSVIVG01038260001 Vitis vinifera HOM05D004037 ORTHO05D004744 9.0e-126 454.1 298 76.5
Duzib093G0613 Durio zibethinus HOM05D004037 ORTHO05D004744 2.6e-125 452.6 274 78.8
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla HOM05D004037 ORTHO05D004744 2.6e-125 452.6 274 79.2
ClCG09G010780 Citrullus lanatus HOM05D004037 ORTHO05D004744 3.4e-125 452.2 274 79.6
PSO541G3258 Papaver somniferum HOM05D004037 ORTHO05D004744 3.4e-125 452.2 276 78.6
TWI63G1426 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 4.5e-125 451.8 274 78.8
vmacro05805 Vaccinium macrocarpon HOM05D004037 ORTHO05D004744 4.5e-125 451.8 272 80.9
MD15G1142500 Malus domestica HOM05D004037 ORTHO05D004744 5.9e-125 451.4 327 70.0
Manes.05G207900 Manihot esculenta HOM05D004037 ORTHO05D004744 7.7e-125 451.1 274 78.8
PSO675G6334 Papaver somniferum HOM05D004037 ORTHO05D004744 1.0e-124 450.7 276 78.3
Ah.06g182910 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.7e-124 449.9 319 68.0
Gorai.001G202100 Gossypium raimondii HOM05D004037 ORTHO05D004744 2.2e-124 449.5 274 79.6
Prupe.6G152500 Prunus persica HOM05D004037 ORTHO05D004744 2.2e-124 449.5 339 66.4
Gohir.A11G301700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 5.0e-124 448.4 274 78.5
CiPaw.01G202600 Carya illinoinensis HOM05D004037 ORTHO05D004744 6.5e-124 448.0 327 69.7
Gohir.D07G181200 Gossypium hirsutum HOM05D004037 ORTHO05D004744 8.5e-124 447.6 274 79.2
Peaxi162Scf00071g00719 Petunia axillaris HOM05D004037 ORTHO05D004744 1.1e-123 447.2 265 82.3
QL10p064641 Quercus lobata HOM05D004037 ORTHO05D004744 1.1e-123 447.2 313 72.2
Gorai.007G347100 Gossypium raimondii HOM05D004037 ORTHO05D004744 1.4e-123 446.8 321 69.2
Ah.04g165670 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.9e-123 446.4 300 70.0
COL.COLO4_19183 Corchorus olitorius HOM05D004037 ORTHO05D004744 1.9e-123 446.4 299 73.2
QL10p065764 Quercus lobata HOM05D004037 ORTHO05D004744 1.9e-123 446.4 313 72.2
Prupe.7G270700 Prunus persica HOM05D004037 ORTHO05D004744 2.5e-123 446.0 274 78.1
PGR042G3458 Punica granatum HOM05D004037 ORTHO05D004744 3.2e-123 445.7 274 78.5
RcHm_v2.0_Chr2g0084421 Rosa chinensis HOM05D004037 ORTHO05D004744 3.2e-123 445.7 274 78.5
TWI34G0723 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 3.2e-123 445.7 274 78.1
MELO3C013171.2 Cucumis melo HOM05D004037 ORTHO05D004744 4.2e-123 445.3 274 78.1
Gohir.A07G173900 Gossypium hirsutum HOM05D004037 ORTHO05D004744 4.2e-123 445.3 274 78.8
Hund02101 Selenicereus undatus HOM05D004037 ORTHO05D004744 4.2e-123 445.3 321 67.9
Sed0007542 Sechium edule HOM05D004037 ORTHO05D004744 5.5e-123 444.9 274 77.7
Oeu016121.2 Olea europaea HOM05D004037 ORTHO05D004744 7.2e-123 444.5 272 78.7
Thecc.05G172500 Theobroma cacao HOM05D004037 ORTHO05D004744 9.4e-123 444.1 322 70.2
THA.LOC104804380 Tarenaya hassleriana HOM05D004037 ORTHO05D004744 1.2e-122 443.7 300 73.3
Lju470A2T32 Lonicera japonica HOM05D004037 ORTHO05D004744 2.1e-122 443.0 290 75.5
Sc06g0007930 Simmondsia chinensis HOM05D004037 ORTHO05D004744 2.7e-122 442.6 301 72.4
Atru.chr12.1746 Acer truncatum HOM05D004037 ORTHO05D004744 3.6e-122 442.2 274 78.8
AUR62016240 Chenopodium quinoa HOM05D004037 ORTHO05D004744 4.6e-122 441.8 313 69.3
Hund23277 Selenicereus undatus HOM05D004037 ORTHO05D004744 4.6e-122 441.8 301 71.1
Ciclev10020914m.g Citrus clementina HOM05D004037 ORTHO05D004744 6.1e-122 441.4 328 68.6
HPP92_022643 Vanilla planifolia HOM05D004037 ORTHO05D004744 1.0e-121 440.7 321 68.2
CsaV3_7G021780 Cucumis sativus L. HOM05D004037 ORTHO05D004744 1.4e-121 440.3 274 77.0
CANSAT01G0494 Cannabis sativa HOM05D004037 ORTHO05D004744 2.3e-121 439.5 326 67.5
Migut.M01184 Erythranthe guttata HOM05D004037 ORTHO05D004744 6.7e-121 438.0 274 76.3
Gohir.D11G316700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 6.7e-121 438.0 269 78.4
Aa31LG10G14130 Aethionema arabicum HOM05D004037 ORTHO05D004744 8.8e-121 437.6 274 76.6
EL10Ac2g02395 Beta vulgaris HOM05D004037 ORTHO05D004744 8.8e-121 437.6 300 70.7
EL10Ac6g13735 Beta vulgaris HOM05D004037 ORTHO05D004744 8.8e-121 437.6 272 77.2
AUR62032781 Chenopodium quinoa HOM05D004037 ORTHO05D004744 8.8e-121 437.6 304 69.7
Thecc.01G117800 Theobroma cacao HOM05D004037 ORTHO05D004744 1.5e-120 436.8 322 69.3
Actinidia14627 Actinidia chinensis HOM05D004037 ORTHO05D004744 2.0e-120 436.4 307 69.4
FvH4_2g00280 Fragaria vesca HOM05D004037 ORTHO05D004744 2.0e-120 436.4 274 76.3
AT3G59890 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 2.5e-120 436.0 274 76.3
Sp4g26120 Schrenkiella parvula HOM05D004037 ORTHO05D004744 2.5e-120 436.0 274 75.9
Sed0020358 Sechium edule HOM05D004037 ORTHO05D004744 2.5e-120 436.0 274 77.4
ATR0743G110 Amborella trichopoda HOM05D004037 ORTHO05D004744 3.3e-120 435.6 277 74.0
AL5G42050 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 3.3e-120 435.6 274 76.3
Duzib128G0968 Durio zibethinus HOM05D004037 ORTHO05D004744 3.3e-120 435.6 293 73.4
AT2G44040 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 7.4e-120 434.5 274 76.3
Carub.0005s2663 Capsella rubella HOM05D004037 ORTHO05D004744 7.4e-120 434.5 274 75.9
TPR.G5068 Trifolium pratense HOM05D004037 ORTHO05D004744 7.4e-120 434.5 319 67.4
Thhalv10006083m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 9.7e-120 434.1 278 74.8
RcHm_v2.0_Chr2g0126841 Rosa chinensis HOM05D004037 ORTHO05D004744 9.7e-120 434.1 274 75.9
DCAR_002599 Daucus carota HOM05D004037 ORTHO05D004744 1.3e-119 433.7 284 73.6
Glyma.07G060300 Glycine max HOM05D004037 ORTHO05D004744 1.3e-119 433.7 328 64.9
CARHR170220 Cardamine hirsuta HOM05D004037 ORTHO05D004744 1.7e-119 433.3 274 75.9
Glyma.16G028900 Glycine max HOM05D004037 ORTHO05D004744 1.7e-119 433.3 328 65.2
Gohir.D11G317300 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.7e-119 433.3 294 74.1
Phvul.001G003100 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 1.7e-119 433.3 274 77.0
AL4G42910 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 2.2e-119 433.0 274 75.9
Migut.M00539 Erythranthe guttata HOM05D004037 ORTHO05D004744 2.8e-119 432.6 274 75.5
FAN24G1991 Fragaria x ananassa HOM05D004037 ORTHO05D004744 2.8e-119 432.6 277 75.5
Lalb_Chr10g0100171 Lupinus albus HOM05D004037 ORTHO05D004744 2.8e-119 432.6 330 66.7
ECA246G0926 Erigeron canadensis HOM05D004037 ORTHO05D004744 3.7e-119 432.2 329 65.0
arahy.Tifrunner.gnm1.ann1.X3ZCQR Arachis hypogaea HOM05D004037 ORTHO05D004744 6.3e-119 431.4 313 69.3
BcaC01g05190 Brassica carinata HOM05D004037 ORTHO05D004744 6.3e-119 431.4 274 75.5
C03p29380 Brassica napus HOM05D004037 ORTHO05D004744 6.3e-119 431.4 274 75.5
BolC3t15285H Brassica oleracea HOM05D004037 ORTHO05D004744 6.3e-119 431.4 274 75.5
CSS0028639 Camellia sinensis var. sinensis HOM05D004037 ORTHO05D004744 6.3e-119 431.4 297 69.4
PSO339G4618 Papaver somniferum HOM05D004037 ORTHO05D004744 6.3e-119 431.4 276 75.4
Carub.0004s2659 Capsella rubella HOM05D004037 ORTHO05D004744 8.2e-119 431.0 274 74.8
CARHR139200 Cardamine hirsuta HOM05D004037 ORTHO05D004744 8.2e-119 431.0 274 76.3
FAN19G0379 Fragaria x ananassa HOM05D004037 ORTHO05D004744 8.2e-119 431.0 274 75.9
HanXRQChr02g0032821 Helianthus annuus HOM05D004037 ORTHO05D004744 8.2e-119 431.0 331 64.7
A03p24640 Brassica napus HOM05D004037 ORTHO05D004744 1.4e-118 430.3 274 75.5
BraA03t11670Z Brassica rapa HOM05D004037 ORTHO05D004744 1.4e-118 430.3 274 75.5
Medtr8g028145 Medicago truncatula HOM05D004037 ORTHO05D004744 1.4e-118 430.3 310 68.7
Ca_23565_v3 Cicer arietinum L. HOM05D004037 ORTHO05D004744 1.8e-118 429.9 328 65.5
Thhalv10001534m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 1.8e-118 429.9 274 75.9
arahy.Tifrunner.gnm1.ann1.FPGW6Q Arachis hypogaea HOM05D004037 ORTHO05D004744 3.1e-118 429.1 313 69.0
BraA04t18775Z Brassica rapa HOM05D004037 ORTHO05D004744 5.3e-118 428.3 274 74.8
Haze_11114 Corylus avellana HOM05D004037 ORTHO05D004744 5.3e-118 428.3 323 68.4
VMungo1383G1316 Vigna mungo HOM05D004037 ORTHO05D004744 5.3e-118 428.3 311 68.5
BcaB01g03335 Brassica carinata HOM05D004037 ORTHO05D004744 9.1e-118 427.6 274 74.5
BolC4t28586H Brassica oleracea HOM05D004037 ORTHO05D004744 1.2e-117 427.2 274 74.5
A04p33160 Brassica napus HOM05D004037 ORTHO05D004744 2.0e-117 426.4 274 74.8
MSTRG.7308 Avicennia marina HOM05D004037 ORTHO05D004744 4.5e-117 425.2 274 76.3
Aa31LG1G25710 Aethionema arabicum HOM05D004037 ORTHO05D004744 5.9e-117 424.9 274 73.7
C04p70860 Brassica napus HOM05D004037 ORTHO05D004744 5.9e-117 424.9 274 74.1
Phvul.010G108900 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 5.9e-117 424.9 329 65.3
Lsat_1_v5_gn_3_17660 Lactuca sativa HOM05D004037 ORTHO05D004744 3.8e-116 422.2 274 73.0
BcaB06g29352 Brassica carinata HOM05D004037 ORTHO05D004744 5.0e-116 421.8 269 75.8
Psat4g089800 Pisum sativum HOM05D004037 ORTHO05D004744 2.5e-115 419.5 319 66.8
Lj3g0014190 Lotus japonicus HOM05D004037 ORTHO05D004744 4.2e-115 418.7 274 74.5
PSO384G4791 Papaver somniferum HOM05D004037 ORTHO05D004744 3.6e-114 415.6 276 73.2
Potri.017G001900 Populus trichocarpa HOM05D004037 ORTHO05D004744 4.7e-114 415.2 274 73.7
Os02g0436400 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 3.9e-113 412.1 277 72.2
Zm00001eb176170 Zea mays HOM05D004037 ORTHO05D004744 9.7e-112 407.5 277 70.0
Os03g0245100 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 2.8e-111 406.0 277 67.9
AUR62028616 Chenopodium quinoa HOM05D004037 ORTHO05D004744 4.8e-111 405.2 293 67.6
AUR62032340 Chenopodium quinoa HOM05D004037 ORTHO05D004744 4.8e-111 405.2 285 68.8
Cpa.g.sc182.24 Carica papaya HOM05D004037 ORTHO05D004744 9.1e-110 401.0 261 73.6
SalBow8G4021 Salvia bowleyana HOM05D004037 ORTHO05D004744 1.2e-109 400.6 252 75.8
Lj6C283G4 Lonicera japonica HOM05D004037 ORTHO05D004744 2.6e-109 399.4 274 71.9
Potri.007G145900 Populus trichocarpa HOM05D004037 ORTHO05D004744 3.5e-109 399.1 271 70.5
Oeu050828.1 Olea europaea HOM05D004037 ORTHO05D004744 4.5e-109 398.7 306 67.0
unitig_37.g12156 Utricularia gibba HOM05D004037 ORTHO05D004744 7.7e-109 397.9 252 73.8
BcaC02g07140 Brassica carinata HOM05D004037 ORTHO05D004744 4.2e-107 392.1 274 70.8
SEGI_29918 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 1.2e-106 390.6 305 61.0
HanXRQChr05g0133541 Helianthus annuus HOM05D004037 ORTHO05D004744 1.6e-106 390.2 281 68.3
Nn048s41912 Nelumbo nucifera HOM05D004037 ORTHO05D004744 1.8e-105 386.7 296 66.2
Cfa008527 Carpinus fangiana HOM05D004037 ORTHO05D004744 2.0e-104 383.3 323 61.9
Sabra17G0005900 Salix brachista HOM05D004037 ORTHO05D004744 2.6e-104 382.9 310 62.9
SGA_v2.0_scaffold22G09788 Striga asiatica HOM05D004037 ORTHO05D004744 3.3e-104 382.5 274 69.3
BcaB06g29511 Brassica carinata HOM05D004037 ORTHO05D004744 2.0e-101 373.2 268 69.0
Sopen01g041950 Solanum pennellii HOM05D004037 ORTHO05D004744 6.5e-100 368.2 231 76.2
SMO347G0499 Selaginella moellendorffii HOM05D004037 ORTHO05D004744 2.6e-96 356.3 274 60.2
Pp3c15_7380 Physcomitrium patens HOM05D004037 ORTHO05D004744 1.3e-95 354.0 274 61.7
CBR_g41668 Chara braunii HOM05D004037 ORTHO05D004744 7.7e-93 344.7 305 53.1
Peaxi162Scf00434g00730 Petunia axillaris HOM05D004037 ORTHO05D004744 1.8e-89 333.6 186 87.6
Mapoly0033s0134 Marchantia polymorpha HOM05D004037 ORTHO05D004744 8.0e-82 308.1 282 55.3
Dinv24475 Davidia involucrata HOM05D004037 ORTHO05D004744 1.8e-81 307.0 235 66.4
Cre14.g627850 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 6.8e-81 305.1 277 53.1
Nitab4.5_0001165g0010 Nicotiana tabacum HOM05D004037 ORTHO05D004744 1.5e-80 303.9 190 77.4
MCO16G413 Micromonas commoda HOM05D004037 ORTHO05D004744 4.6e-77 292.4 288 53.1
PRCOL_00006631 Prasinoderma coloniale HOM05D004037 ORTHO05D004744 1.2e-74 284.3 273 47.6
FAN20G0369 Fragaria x ananassa HOM05D004037 ORTHO05D004744 8.0e-74 281.6 188 71.8
Peaxi162Scf00434g00733 Petunia axillaris HOM05D004037 ORTHO05D004744 7.3e-67 258.5 218 64.7
Peaxi162Scf00434g00740 Petunia axillaris HOM05D004037 ORTHO05D004744 2.1e-66 256.9 174 77.0
Gohir.D09G124433 Gossypium hirsutum HOM05D004037 ORTHO05D004744 9.8e-64 248.1 239 58.2
Nn048s41913 Nelumbo nucifera HOM05D004037 ORTHO05D004744 1.1e-57 228.0 123 89.4
Actinidia11426 Actinidia chinensis HOM05D004037 ORTHO05D004744 1.4e-57 227.6 159 73.0
Gorai.006G143300 Gossypium raimondii HOM05D004037 ORTHO05D004744 3.1e-57 226.5 220 57.7
Zm00001eb398800 Zea mays HOM05D004037 ORTHO05D004744 2.3e-52 210.3 158 59.5
BcaB01g03344 Brassica carinata HOM05D004037 ORTHO05D004744 7.3e-51 205.3 251 49.4
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 9.9e-48 194.9 175 58.3
AagrBONN_evm.TU.Sc2ySwM_368.1842 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.7e-44 184.1 192 50.0
AagrBONN_evm.TU.Sc2ySwM_368.1728 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.3e-36 157.9 138 58.7
FvH4_2g00640 Fragaria vesca HOM05D004037 ORTHO05D004744 6.7e-36 155.6 90 83.3
PSO451G0001 Papaver somniferum HOM05D004037 ORTHO05D004744 2.1e-34 150.6 77 92.2
Cre16.g656300 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 1.5e-32 144.4 280 31.1
RhsimUnG0159300 Rhododendron simsii HOM05D004037 ORTHO05D004744 1.8e-28 131.0 172 47.1
MBI01_g38182_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 1.5e-27 127.9 75 82.7
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 2.0e-24 117.5 68 83.8
MD02G1000400 Malus domestica HOM05D004037 ORTHO05D004744 6.5e-23 112.5 89 58.4
AagrBONN_evm.TU.Sc2ySwM_152.2 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.1e-22 111.7 164 40.9
ATR0716G071 Amborella trichopoda HOM05D004037 ORTHO05D004744 7.9e-21 105.5 66 83.3
AagrBONN_evm.TU.Sc2ySwM_344.5552 Anthoceros agrestis HOM05D004037 ORTHO05D004744 9.0e-17 92.0 83 56.6
SEGI_36179 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 5.9e-16 89.4 181 31.5
CAN.G1019.1 Capsicum annuum HOM05D004037 ORTHO05D004744 1.1e-09 68.6 59 52.5
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.0e-08 64.3 79 45.6
Nn1g07592 Nelumbo nucifera HOM05D004037 ORTHO05D004744 5.5e-06 56.2 39 79.5


User provided reference genes

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