Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.4e-90 336.3 174 100.0
CDE08G1537 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 6.3e-62 241.1 160 81.9
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 3.0e-32 142.5 184 47.8
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 1.3e-30 137.1 176 48.3
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 2.2e-30 136.3 182 45.6
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 2.2e-30 136.3 182 45.6
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 2.2e-30 136.3 182 45.6
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 1.2e-28 130.6 182 45.1
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 2.0e-28 129.8 177 46.9
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 3.5e-28 129.0 176 48.3
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 1.0e-27 127.5 182 45.6
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 1.3e-27 127.1 182 45.6
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 1.7e-27 126.7 186 45.7
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 2.9e-27 125.9 181 45.9
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 1.5e-26 123.6 178 44.4
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 1.9e-26 123.2 189 45.5
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 4.2e-26 122.1 184 45.1
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 5.5e-26 121.7 177 43.5
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 7.2e-26 121.3 182 44.5
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 7.2e-26 121.3 179 44.1
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 9.5e-26 120.9 179 45.3
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 9.5e-26 120.9 177 45.2
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 9.5e-26 120.9 183 46.4
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 2.1e-25 119.8 180 43.9
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 2.8e-25 119.4 180 43.9
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 4.7e-25 118.6 183 43.7
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 4.7e-25 118.6 183 44.3
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 6.1e-25 118.2 183 43.7
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 6.1e-25 118.2 186 41.9
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 8.0e-25 117.9 182 45.1
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 8.0e-25 117.9 184 41.8
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 8.0e-25 117.9 182 47.3
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 1.0e-24 117.5 179 43.6
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 1.0e-24 117.5 177 42.4
AUR62009547 Chenopodium quinoa HOM05D004998 ORTHO05D006104 1.4e-24 117.1 183 42.6
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 1.8e-24 116.7 186 46.8
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 1.8e-24 116.7 177 44.6
AUR62001761 Chenopodium quinoa HOM05D004998 ORTHO05D006104 2.3e-24 116.3 183 42.6
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 2.3e-24 116.3 183 45.4
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 3.0e-24 115.9 178 43.8
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 5.2e-24 115.2 177 44.1
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 5.2e-24 115.2 182 42.9
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 6.8e-24 114.8 177 44.6
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 8.9e-24 114.4 184 43.5
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 8.9e-24 114.4 182 44.5
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 1.2e-23 114.0 184 43.5
FAN11G2014 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.2e-23 114.0 183 43.2
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.2e-23 114.0 181 45.9
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 2.0e-23 113.2 184 44.6
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 2.0e-23 113.2 180 43.9
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 2.0e-23 113.2 185 42.7
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 2.0e-23 113.2 192 41.7
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 2.6e-23 112.8 185 42.7
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 2.6e-23 112.8 176 43.2
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 2.6e-23 112.8 182 44.5
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 3.4e-23 112.5 183 43.7
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 3.4e-23 112.5 181 43.1
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 5.7e-23 111.7 177 43.5
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 5.7e-23 111.7 184 42.9
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 7.5e-23 111.3 177 45.2
Lsat_1_v5_gn_9_23841 Lactuca sativa HOM05D004998 ORTHO05D006104 9.8e-23 110.9 181 42.0
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 3.7e-22 109.0 182 46.7
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 3.7e-22 109.0 176 44.3
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 4.9e-22 108.6 184 45.7
FAN21G1380 Fragaria x ananassa HOM05D004998 ORTHO05D006104 6.3e-22 108.2 188 42.6
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 1.1e-21 107.5 177 44.6
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 1.4e-21 107.1 177 45.2
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 1.4e-21 107.1 184 45.7
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 1.4e-21 107.1 180 41.7
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 1.8e-21 106.7 186 41.4
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 5.4e-21 105.1 181 39.8
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 9.2e-21 104.4 181 39.8
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 9.2e-21 104.4 181 42.5
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 1.2e-20 104.0 175 41.1
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.2e-20 104.0 175 41.1
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 2.0e-20 103.2 195 40.5
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 4.5e-20 102.1 177 42.9
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 5.9e-20 101.7 225 35.1
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 7.8e-20 101.3 196 40.8
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 7.8e-20 101.3 172 40.1
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.0e-19 100.9 201 40.3
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 2.3e-19 99.8 92 54.3
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 3.8e-19 99.0 174 40.2
PSO339G2709 Papaver somniferum HOM05D004998 ORTHO05D006104 3.8e-19 99.0 187 41.2
Sed0008555 Sechium edule HOM05D004998 ORTHO05D006104 3.8e-19 99.0 182 44.0
Aa31LG4G15620 Aethionema arabicum HOM05D004998 ORTHO05D006104 5.0e-19 98.6 172 38.4
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 5.0e-19 98.6 180 38.9
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.1e-18 97.4 162 42.0
Peaxi162Scf00092g01117 Petunia axillaris HOM05D004998 ORTHO05D006104 1.5e-18 97.1 185 38.9
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 1.5e-18 97.1 177 37.9
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 1.9e-18 96.7 174 39.1
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 3.3e-18 95.9 186 37.6
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 5.6e-18 95.1 98 53.1
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.2e-17 94.0 160 42.5
Os01g0144600 Oryza sativa ssp. japonica HOM05D004998 ORTHO05D006104 2.1e-17 93.2 201 38.8
Gorai.003G130300 Gossypium raimondii HOM05D004998 ORTHO05D006104 2.8e-17 92.8 162 40.7
Sp6g21150 Schrenkiella parvula HOM05D004998 ORTHO05D006104 3.6e-17 92.4 177 39.0
ECA247G2861 Erigeron canadensis HOM05D004998 ORTHO05D006104 4.7e-17 92.0 181 38.7
C03p13690 Brassica napus HOM05D004998 ORTHO05D006104 1.0e-16 90.9 176 37.5
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 1.4e-16 90.5 181 36.5
Thhalv10002686m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 1.4e-16 90.5 182 40.1
BcaB05g22508 Brassica carinata HOM05D004998 ORTHO05D006104 5.2e-16 88.6 175 36.0
TPR.G5593 Trifolium pratense HOM05D004998 ORTHO05D006104 5.2e-16 88.6 193 37.8
Thhalv10014846m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 6.8e-16 88.2 174 39.1
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 1.2e-15 87.4 164 36.6
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 7.5e-15 84.7 125 42.4
BcaC03g14012 Brassica carinata HOM05D004998 ORTHO05D006104 9.8e-15 84.3 175 37.7
C02p12480 Brassica napus HOM05D004998 ORTHO05D006104 9.8e-15 84.3 175 37.7
BolC2t07348H Brassica oleracea HOM05D004998 ORTHO05D006104 9.8e-15 84.3 175 37.7
FAN21G1361 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.7e-14 83.6 91 50.5
FAN25G2664 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.7e-14 83.6 91 50.5
Cpa.g.sc81.121 Carica papaya HOM05D004998 ORTHO05D006104 2.9e-14 82.8 75 56.0
BcaB08g36256 Brassica carinata HOM05D004998 ORTHO05D006104 1.4e-13 80.5 177 35.6
A02p07120 Brassica napus HOM05D004998 ORTHO05D006104 1.4e-13 80.5 175 37.7
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 1.4e-13 80.5 185 35.7
Zm00001eb124480 Zea mays HOM05D004998 ORTHO05D006104 3.2e-13 79.3 82 52.4
Nitab4.5_0006945g0010 Nicotiana tabacum HOM05D004998 ORTHO05D006104 7.0e-13 78.2 185 36.2
SEGI_30466 Sequoiadendron giganteum HOM05D004998 ORTHO05D006104 9.2e-13 77.8 150 36.7
BraA02t05793Z Brassica rapa HOM05D004998 ORTHO05D006104 1.2e-12 77.4 175 36.0
BraA10t43749Z Brassica rapa HOM05D004998 ORTHO05D006104 2.7e-12 76.3 160 34.4
BolC3t13819H Brassica oleracea HOM05D004998 ORTHO05D006104 6.0e-12 75.1 141 38.3
FvH4_3g41460 Fragaria vesca HOM05D004998 ORTHO05D006104 6.0e-12 75.1 187 36.4
A10p16680 Brassica napus HOM05D004998 ORTHO05D006104 1.3e-11 73.9 160 35.0
FAN11G1834 Fragaria x ananassa HOM05D004998 ORTHO05D006104 3.0e-11 72.8 191 36.6
Pp3c16_15780 Physcomitrium patens HOM05D004998 ORTHO05D006104 2.5e-10 69.7 189 32.3
C09p51870 Brassica napus HOM05D004998 ORTHO05D006104 1.2e-09 67.4 147 36.7
BolC9t58049H Brassica oleracea HOM05D004998 ORTHO05D006104 2.8e-09 66.2 122 39.3
Aa31LG1G11810 Aethionema arabicum HOM05D000959 ORTHO05D000775 4.7e-09 65.5 164 32.9
BcaC04g19766 Brassica carinata HOM05D004998 ORTHO05D006104 1.4e-08 63.9 168 32.1
BcaB08g36255 Brassica carinata HOM05D004998 ORTHO05D006104 6.8e-08 61.6 166 33.1
Nitab4.5_0007132g0030 Nicotiana tabacum HOM05D004998 ORTHO05D006104 8.9e-08 61.2 170 33.5
BcaC01g06521 Brassica carinata HOM05D004998 ORTHO05D006104 2.6e-07 59.7 175 30.9
unitig_37.g12674 Utricularia gibba HOM05D004998 ORTHO05D006104 5.8e-07 58.5 130 33.8
C03p13710 Brassica napus HOM05D004998 ORTHO05D006104 4.9e-06 55.5 122 35.2
Oeu002429.1 Olea europaea HOM05D004998 ORTHO05D006104 4.9e-06 55.5 56 57.1


User provided reference genes

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