Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2801 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 2.5e-101 372.1 182 100.0
GSVIVG01031169001 Vitis vinifera HOM05D005943 ORTHO05D007328 1.0e-94 350.1 182 93.4
CSS0008719 Camellia sinensis var. sinensis HOM05D005943 ORTHO05D007328 6.5e-94 347.4 182 92.3
Nn3g21529 Nelumbo nucifera HOM05D005943 ORTHO05D007328 7.2e-93 344.0 182 89.0
Dinv30834 Davidia involucrata HOM05D005943 ORTHO05D007328 1.6e-92 342.8 182 90.7
Migut.E01764 Erythranthe guttata HOM05D005943 ORTHO05D007328 1.6e-92 342.8 182 91.2
Ciclev10002634m.g Citrus clementina HOM05D005943 ORTHO05D007328 2.1e-92 342.4 182 91.2
Aqoxy5G00777 Aquilegia oxysepala HOM05D005943 ORTHO05D007328 2.7e-92 342.0 182 89.0
Potri.013G013700 Populus trichocarpa HOM05D005943 ORTHO05D007328 3.6e-92 341.7 182 90.7
CiPaw.07G023200 Carya illinoinensis HOM05D005943 ORTHO05D007328 4.7e-92 341.3 182 90.1
Dinv40356 Davidia involucrata HOM05D005943 ORTHO05D007328 6.1e-92 340.9 182 89.6
PSO170G5805 Papaver somniferum HOM05D005943 ORTHO05D007328 1.4e-91 339.7 182 89.0
PSO407G0008 Papaver somniferum HOM05D005943 ORTHO05D007328 1.4e-91 339.7 182 89.0
TWI56G0702 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 1.4e-91 339.7 182 90.1
Potri.005G023600 Populus trichocarpa HOM05D005943 ORTHO05D007328 1.8e-91 339.3 182 89.6
CsaV3_1G038680 Cucumis sativus L. HOM05D005943 ORTHO05D007328 2.3e-91 339.0 182 89.6
Duzib177G0451 Durio zibethinus HOM05D005943 ORTHO05D007328 2.3e-91 339.0 182 89.6
HPP92_018258 Vanilla planifolia HOM05D005943 ORTHO05D007328 2.3e-91 339.0 182 87.9
Thecc.05G315300 Theobroma cacao HOM05D005943 ORTHO05D007328 3.0e-91 338.6 182 89.6
Cc02_g34350 Coffea canephora HOM05D005943 ORTHO05D007328 3.9e-91 338.2 182 89.0
Lalb_Chr23g0271691 Lupinus albus HOM05D005943 ORTHO05D007328 5.1e-91 337.8 182 88.5
Manes.08G116100 Manihot esculenta HOM05D005943 ORTHO05D007328 5.1e-91 337.8 182 89.0
PGR031G0471 Punica granatum HOM05D005943 ORTHO05D007328 6.7e-91 337.4 180 90.0
RcHm_v2.0_Chr3g0456101 Rosa chinensis HOM05D005943 ORTHO05D007328 6.7e-91 337.4 182 89.6
ATR0796G119 Amborella trichopoda HOM05D005943 ORTHO05D007328 1.1e-90 336.7 176 91.5
HanXRQChr11g0339821 Helianthus annuus HOM05D005943 ORTHO05D007328 1.5e-90 336.3 182 89.6
MSTRG.4510 Avicennia marina HOM05D005943 ORTHO05D007328 2.0e-90 335.9 182 89.0
MD12G1211900 Malus domestica HOM05D005943 ORTHO05D007328 2.0e-90 335.9 182 89.6
Nn4g25770 Nelumbo nucifera HOM05D005943 ORTHO05D007328 2.0e-90 335.9 176 91.5
Prupe.6G319400 Prunus persica HOM05D005943 ORTHO05D007328 2.6e-90 335.5 182 89.6
unitig_0.g32 Utricularia gibba HOM05D005943 ORTHO05D007328 2.6e-90 335.5 180 88.9
Cpa.g.sc48.107 Carica papaya HOM05D005943 ORTHO05D007328 3.3e-90 335.1 182 88.5
Eucgr.L02935 Eucalyptus grandis HOM05D005943 ORTHO05D007328 3.3e-90 335.1 177 91.0
MD04G1198400 Malus domestica HOM05D005943 ORTHO05D007328 3.3e-90 335.1 182 89.0
Ca_16733_v3 Cicer arietinum L. HOM05D005943 ORTHO05D007328 4.4e-90 334.7 182 87.9
Gohir.A11G269200 Gossypium hirsutum HOM05D005943 ORTHO05D007328 4.4e-90 334.7 182 87.9
Gohir.D11G279400 Gossypium hirsutum HOM05D005943 ORTHO05D007328 4.4e-90 334.7 182 87.9
Phvul.009G047900 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 4.4e-90 334.7 182 88.5
Haze_04120 Corylus avellana HOM05D005943 ORTHO05D007328 5.7e-90 334.3 178 90.4
Lj1g0013041 Lotus japonicus HOM05D005943 ORTHO05D007328 5.7e-90 334.3 182 87.9
Glyma.06G132000 Glycine max HOM05D005943 ORTHO05D007328 7.4e-90 334.0 182 87.9
Os01g0314300 Oryza sativa ssp. japonica HOM05D005943 ORTHO05D007328 7.4e-90 334.0 182 87.4
Gorai.007G301600 Gossypium raimondii HOM05D005943 ORTHO05D007328 9.7e-90 333.6 182 87.4
Sed0027178 Sechium edule HOM05D005943 ORTHO05D007328 1.3e-89 333.2 182 87.9
CANSAT35G1584 Cannabis sativa HOM05D005943 ORTHO05D007328 1.7e-89 332.8 182 87.4
Solyc01g099890.3 Solanum lycopersicum HOM05D005943 ORTHO05D007328 1.7e-89 332.8 182 89.0
Sopen01g043410 Solanum pennellii HOM05D005943 ORTHO05D007328 1.7e-89 332.8 182 89.0
ECA236G0332 Erigeron canadensis HOM05D005943 ORTHO05D007328 2.8e-89 332.0 182 87.4
Psat3g152320 Pisum sativum HOM05D005943 ORTHO05D007328 2.8e-89 332.0 182 86.8
Lalb_Chr11g0067091 Lupinus albus HOM05D005943 ORTHO05D007328 6.3e-89 330.9 182 85.2
COL.COLO4_10548 Corchorus olitorius HOM05D005943 ORTHO05D007328 1.1e-88 330.1 179 88.3
QL03p019642 Quercus lobata HOM05D005943 ORTHO05D007328 1.1e-88 330.1 181 86.7
TPR.G33656 Trifolium pratense HOM05D005943 ORTHO05D007328 1.1e-88 330.1 181 86.2
Glyma.04G232900 Glycine max HOM05D005943 ORTHO05D007328 1.4e-88 329.7 182 86.8
Rhsim05G0137500 Rhododendron simsii HOM05D005943 ORTHO05D007328 1.8e-88 329.3 202 81.7
Medtr3g091920 Medicago truncatula HOM05D005943 ORTHO05D007328 5.3e-88 327.8 179 87.2
Sed0012379 Sechium edule HOM05D005943 ORTHO05D007328 1.2e-87 326.6 178 87.6
Sc06g0003910 Simmondsia chinensis HOM05D005943 ORTHO05D007328 1.2e-87 326.6 182 85.2
AUR62005222 Chenopodium quinoa HOM05D005943 ORTHO05D007328 2.6e-87 325.5 182 84.6
Duzib128G1848 Durio zibethinus HOM05D005943 ORTHO05D007328 3.5e-87 325.1 176 89.8
PGSC0003DMG400024722 Solanum tuberosum HOM05D005943 ORTHO05D007328 3.5e-87 325.1 182 86.8
Lsat_1_v5_gn_7_72860 Lactuca sativa HOM05D005943 ORTHO05D007328 5.9e-87 324.3 179 86.0
Sabra13G0012200 Salix brachista HOM05D001727 ORTHO05D007328 1.0e-86 323.6 176 88.1
Oeu048875.1 Olea europaea HOM05D005943 ORTHO05D007328 2.9e-86 322.0 182 87.4
SGA_v2.0_scaffold42G16032 Striga asiatica HOM05D005943 ORTHO05D007328 6.5e-86 320.9 197 81.2
TWI12G0949 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 6.5e-86 320.9 172 90.7
Sabra05G0029200 Salix brachista HOM05D001727 ORTHO05D050481 8.5e-86 320.5 173 89.0
MELO3C015293.2 Cucumis melo HOM05D001727 ORTHO05D001758 1.5e-85 319.7 173 87.9
DCAR_022176 Daucus carota HOM05D005943 ORTHO05D007328 1.5e-85 319.7 194 80.9
THA.LOC104805894 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 1.5e-85 319.7 182 83.5
Atru.chr2.102 Acer truncatum HOM05D001727 ORTHO05D001758 2.5e-85 318.9 172 88.4
CARHR009020 Cardamine hirsuta HOM05D005943 ORTHO05D007328 7.2e-85 317.4 182 83.5
BcaC05g24766 Brassica carinata HOM05D005943 ORTHO05D007328 1.2e-84 316.6 182 83.5
Thhalv10008886m.g Eutrema salsugineum HOM05D005943 ORTHO05D007328 1.2e-84 316.6 182 83.5
Hund07108 Selenicereus undatus HOM05D005943 ORTHO05D007328 1.2e-84 316.6 178 83.7
Sp1g07730 Schrenkiella parvula HOM05D005943 ORTHO05D007328 2.1e-84 315.8 182 83.0
AL1G19590 Arabidopsis lyrata HOM05D005943 ORTHO05D007328 6.1e-84 314.3 182 83.0
AT1G09150 Arabidopsis thaliana HOM05D005943 ORTHO05D007328 6.1e-84 314.3 182 83.0
THA.LOC104820740 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 6.1e-84 314.3 178 85.4
Mapoly0028s0141 Marchantia polymorpha HOM05D005943 ORTHO05D007328 1.0e-83 313.5 182 81.3
Pp3c25_690 Physcomitrium patens HOM05D005943 ORTHO05D007328 1.0e-83 313.5 182 81.9
AagrBONN_evm.TU.Sc2ySwM_228.5507 Anthoceros agrestis HOM05D005943 ORTHO05D007328 1.4e-83 313.2 176 84.1
Carub.0001s0844 Capsella rubella HOM05D005943 ORTHO05D007328 5.2e-83 311.2 182 81.9
BraA06t23801Z Brassica rapa HOM05D005943 ORTHO05D007328 1.7e-81 306.2 177 82.5
Peaxi162Scf00037g01419 Petunia axillaris HOM05D005943 ORTHO05D007328 2.8e-81 305.4 178 84.8
CDE09G0522 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 3.7e-81 305.1 149 98.7
MD04G1083700 Malus domestica HOM05D005943 ORTHO05D007328 8.2e-81 303.9 208 75.0
EL10Ac4g09897 Beta vulgaris HOM05D005943 ORTHO05D007328 7.0e-80 300.8 182 80.8
C08p12460 Brassica napus HOM05D005943 ORTHO05D007328 9.1e-80 300.4 174 82.2
BolC8t48886H Brassica oleracea HOM05D005943 ORTHO05D007328 1.6e-79 299.7 173 82.7
A06p05940 Brassica napus HOM05D005943 ORTHO05D007328 2.0e-79 299.3 174 81.6
A08p34800 Brassica napus HOM05D005943 ORTHO05D007328 2.0e-79 299.3 174 81.6
C05p07140 Brassica napus HOM05D005943 ORTHO05D007328 2.0e-79 299.3 174 81.6
C08p12470 Brassica napus HOM05D005943 ORTHO05D007328 2.7e-79 298.9 174 81.6
Nitab4.5_0003113g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 1.1e-77 293.5 182 81.9
FAN02G3650 Fragaria x ananassa HOM05D005943 ORTHO05D007328 1.8e-75 286.2 182 76.4
VMungo1309G2765 Vigna mungo HOM05D005943 ORTHO05D007328 1.8e-75 286.2 152 88.2
BcaC07g38477 Brassica carinata HOM05D005943 ORTHO05D007328 2.0e-74 282.7 183 77.6
FAN09G2521 Fragaria x ananassa HOM05D005943 ORTHO05D007328 1.3e-73 280.0 177 76.8
SMO169G0068 Selaginella moellendorffii HOM05D005943 ORTHO05D007328 2.2e-73 279.3 182 76.4
Nitab4.5_0003497g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 3.7e-73 278.5 155 87.7
arahy.Tifrunner.gnm1.ann1.KZ6QJ9 Arachis hypogaea HOM05D005943 ORTHO05D007328 4.8e-73 278.1 155 85.8
Lj7A623G46 Lonicera japonica HOM05D005943 ORTHO05D007328 8.3e-73 277.3 151 88.1
AUR62000742 Chenopodium quinoa HOM05D005943 ORTHO05D007328 2.9e-70 268.9 155 81.9
Aa31sc55G100 Aethionema arabicum HOM05D005943 ORTHO05D007328 1.4e-67 260.0 155 81.3
Atru.chr6.2339 Acer truncatum HOM05D005943 ORTHO05D007328 1.7e-65 253.1 181 71.8
vmacro19698 Vaccinium macrocarpon HOM05D005943 ORTHO05D007328 1.1e-64 250.4 128 93.0
FvH4_6g06770 Fragaria vesca HOM05D005943 ORTHO05D007328 2.4e-64 249.2 184 71.7
Zm00001eb339860 Zea mays HOM05D005943 ORTHO05D007328 4.1e-64 248.4 130 90.0
BraA08t35391Z Brassica rapa HOM05D005943 ORTHO05D007328 3.5e-63 245.4 139 81.3
PRCOL_00003880 Prasinoderma coloniale HOM05D005943 ORTHO05D007328 9.5e-61 237.3 184 62.5
arahy.Tifrunner.gnm1.ann1.2NZ4WG Arachis hypogaea HOM05D000716 ORTHO05D004822 5.2e-59 231.5 125 85.6
Haze_26177 Corylus avellana HOM05D005943 ORTHO05D007328 4.1e-56 221.9 177 59.3
MCO12G098 Micromonas commoda HOM05D005943 ORTHO05D007328 2.7e-55 219.2 185 58.9
SalBow1G5257 Salvia bowleyana HOM05D005943 ORTHO05D007328 3.9e-54 215.3 155 69.7
MBI18_g25341_MAGBIO Magnolia biondii HOM05D005943 ORTHO05D007328 2.3e-51 206.1 105 91.4
TAR362G1289 Trochodendron aralioides HOM05D005943 ORTHO05D007328 6.8e-51 204.5 105 91.4
Eucgr.H03253 Eucalyptus grandis HOM05D005943 ORTHO05D007328 2.9e-49 199.1 105 89.5
Phvul.009G047833 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 8.3e-49 197.6 105 88.6
SEGI_36457 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 2.5e-45 186.0 101 86.1
HPP92_018260 Vanilla planifolia HOM05D005943 ORTHO05D007328 7.3e-45 184.5 100 88.0
Duzib106G1343 Durio zibethinus HOM05D005943 ORTHO05D007328 1.5e-42 176.8 179 57.0
TAR633G1587 Trochodendron aralioides HOM05D005943 ORTHO05D007328 1.5e-42 176.8 154 61.7
Eucgr.H03239 Eucalyptus grandis HOM05D005943 ORTHO05D007328 3.5e-39 165.6 92 87.0
BcaC07g38474 Brassica carinata HOM05D005943 ORTHO05D007328 1.0e-38 164.1 92 84.8
Eucgr.H03249 Eucalyptus grandis HOM05D005943 ORTHO05D007328 6.6e-38 161.4 86 88.4
CBR_g36436 Chara braunii HOM05D005943 ORTHO05D007328 1.9e-37 159.8 91 78.0
Cre50.g761397 Chlamydomonas reinhardtii HOM05D005943 ORTHO05D007328 5.8e-34 148.3 127 57.5
CBR_g20980 Chara braunii HOM05D005943 ORTHO05D007328 6.4e-33 144.8 87 79.3
Eucgr.H03245 Eucalyptus grandis HOM05D005943 ORTHO05D007328 4.6e-31 138.7 92 77.2
ClCG03G017220 Citrullus lanatus HOM05D001727 ORTHO05D001758 1.4e-27 127.1 66 89.4
Eucgr.H03250 Eucalyptus grandis HOM05D005943 ORTHO05D007328 3.8e-25 119.0 70 84.3
EL10Ac5g11162 Beta vulgaris HOM05D005943 ORTHO05D007328 8.4e-25 117.9 77 76.6
Nn1g03974 Nelumbo nucifera HOM05D005943 ORTHO05D007328 5.8e-18 95.1 49 87.8
SEGI_40081 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 2.1e-15 86.7 49 83.7
Lalb_Chr03g0033811 Lupinus albus HOM05D005117 ORTHO05D005956 6.7e-14 81.6 182 30.8
Duzib093G1290 Durio zibethinus HOM05D005117 ORTHO05D005956 1.5e-13 80.5 183 30.1
Thecc.08G180900 Theobroma cacao HOM05D005117 ORTHO05D005956 2.1e-12 76.6 182 29.1
Manes.18G111600 Manihot esculenta HOM05D005117 ORTHO05D005956 6.2e-12 75.1 182 28.6
Cre03.g168605 Chlamydomonas reinhardtii HOM05D005943 ORTHO05D007328 1.1e-11 74.3 52 63.5
TWI12G0486 Tripterygium wilfordii HOM05D005117 ORTHO05D005956 1.1e-11 74.3 182 28.0
PGR004G2811 Punica granatum HOM05D005117 ORTHO05D005956 2.4e-11 73.2 182 28.6
CBR_g6708 Chara braunii HOM05D005117 ORTHO05D005956 1.9e-08 63.5 180 29.4


User provided reference genes

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