Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 5.6e-92 340.9 168 100.0
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.4e-58 229.9 226 59.7
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 6.3e-51 204.5 103 94.2
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 8.2e-51 204.1 103 94.2
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-50 203.8 138 76.1
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-50 203.8 138 76.1
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-50 203.8 138 76.1
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-50 203.8 138 76.1
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-50 203.8 138 76.1
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.1e-50 201.8 103 93.2
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 5.3e-50 201.4 153 70.6
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 5.3e-50 201.4 109 88.1
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.3e-50 201.4 138 75.4
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.3e-50 201.4 138 75.4
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 6.9e-50 201.1 138 75.4
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.2e-49 200.3 145 70.3
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 1.5e-49 199.9 103 92.2
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 3.4e-49 198.7 138 73.9
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 3.4e-49 198.7 138 75.4
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 4.5e-49 198.4 136 75.0
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 5.9e-49 198.0 103 92.2
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 5.9e-49 198.0 103 92.2
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 5.9e-49 198.0 103 92.2
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 5.9e-49 198.0 103 92.2
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 7.7e-49 197.6 138 74.6
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 7.7e-49 197.6 138 74.6
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 7.7e-49 197.6 114 84.2
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.0e-48 197.2 138 74.6
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.0e-48 197.2 138 74.6
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 1.0e-48 197.2 138 74.6
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 1.0e-48 197.2 138 74.6
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 1.0e-48 197.2 138 74.6
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 2.2e-48 196.1 129 79.1
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 2.2e-48 196.1 129 79.1
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 2.2e-48 196.1 138 73.9
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 3.8e-48 195.3 138 73.9
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 5.0e-48 194.9 99 92.9
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 5.0e-48 194.9 103 91.3
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 5.0e-48 194.9 103 91.3
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 6.5e-48 194.5 129 78.3
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 8.5e-48 194.1 138 73.2
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 8.5e-48 194.1 138 73.2
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 8.5e-48 194.1 105 88.6
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 1.4e-47 193.4 129 78.3
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 3.2e-47 192.2 103 90.3
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 4.2e-47 191.8 97 93.8
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 7.2e-47 191.0 105 87.6
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 7.2e-47 191.0 105 87.6
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 9.4e-47 190.7 105 87.6
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 1.2e-46 190.3 128 77.3
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.2e-46 190.3 95 94.7
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 1.2e-46 190.3 135 73.3
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 1.2e-46 190.3 135 73.3
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.6e-46 189.9 103 89.3
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.1e-46 189.5 103 89.3
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 2.1e-46 189.5 138 72.5
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-46 188.0 103 88.3
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-45 185.7 102 88.2
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-45 185.7 102 88.2
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.9e-45 185.3 103 87.4
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-45 185.3 103 87.4
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-44 183.0 103 86.4
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.3e-43 180.3 85 97.6
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-43 179.5 104 82.7
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-43 177.9 104 82.7
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-43 177.6 103 83.5
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-43 177.6 103 83.5
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-42 176.8 103 83.5
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.8e-42 176.4 115 74.8
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.1e-42 175.3 93 90.3
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-42 175.3 98 85.7
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 1.2e-41 173.7 136 66.9
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-41 173.7 99 83.8
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-41 172.9 103 81.6
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-40 168.3 102 81.4
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-40 168.3 132 67.4
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-40 167.5 103 79.6
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 8.5e-40 167.5 79 97.5
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 3.2e-39 165.6 102 80.4
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-39 164.9 129 69.0
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-38 163.7 100 81.0
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-38 162.9 103 79.6
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 4.7e-38 161.8 77 96.1
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.0e-37 160.6 102 79.4
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-37 158.7 103 77.7
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 5.7e-36 154.8 123 67.5
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-36 154.5 82 86.6
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.3e-35 153.7 103 75.7
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-35 151.0 85 83.5
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-35 151.0 85 83.5
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 1.8e-34 149.8 72 97.2
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 1.8e-34 149.8 72 97.2
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 1.8e-34 149.8 72 97.2
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 1.8e-34 149.8 72 97.2
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 4.1e-34 148.7 72 94.4
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 5.3e-34 148.3 114 69.3
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 1.2e-33 147.1 72 95.8
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.2e-33 147.1 72 95.8
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.2e-33 147.1 114 68.4
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 2.9e-32 142.5 74 90.5
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-32 142.5 81 84.0
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-32 141.0 115 65.2
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 9.4e-31 137.5 72 90.3
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-30 136.7 73 89.0
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-30 134.8 78 84.6
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-29 134.0 72 87.5
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-29 132.9 72 87.5
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.0e-29 132.5 72 86.1
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 4.0e-29 132.1 99 62.6
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 4.0e-29 132.1 70 88.6
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-29 131.7 72 87.5
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-29 131.3 72 87.5
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-29 131.3 72 86.1
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-29 131.3 83 77.1
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-29 131.0 72 86.1
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-28 130.6 68 89.7
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-28 128.6 79 81.0
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 5.7e-28 128.3 134 56.7
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-28 128.3 72 84.7
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.3e-27 127.1 100 59.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-27 127.1 72 84.7
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-26 123.6 71 84.5
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.4e-26 122.9 67 85.1
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-26 122.9 72 83.3
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-26 121.7 72 83.3
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-25 118.6 66 84.8
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 7.7e-25 117.9 72 80.6
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-24 117.5 85 71.8
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 6.5e-24 114.8 132 50.0
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-23 111.7 65 81.5
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.2e-22 110.5 62 83.9
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.0e-22 107.8 62 82.3
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.0e-17 93.2 49 87.8
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-17 92.0 50 86.0
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 5.0e-16 88.6 69 66.7
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-15 87.4 56 76.8
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 5.6e-15 85.1 73 63.0
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.1e-14 81.6 43 90.7
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.1e-14 81.6 50 78.0
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 8.0e-14 81.3 69 65.2
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.4e-12 75.9 45 77.8
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 7.5e-12 74.7 41 85.4
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-10 70.1 50 70.0
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 3.5e-09 65.9 41 75.6
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-08 63.9 35 85.7
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-08 63.9 35 85.7
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-08 63.5 78 50.0
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.3e-08 63.2 35 82.9
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-07 60.1 34 82.4
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.3e-07 58.9 37 78.4
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-07 58.2 29 89.7
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-06 55.1 37 73.0


User provided reference genes

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