Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2725 Ceratophyllum demersum HOM05D000089 ORTHO05D129031 8.5e-41 169.9 83 100.0
CDE11G0643 Ceratophyllum demersum HOM05D000089 ORTHO05D002844 1.8e-27 125.6 72 83.3
TAR629G0259 Trochodendron aralioides HOM05D000089 ORTHO05D002844 3.5e-10 68.2 71 49.3
Potri.003G093700 Populus trichocarpa HOM05D000089 ORTHO05D002844 7.7e-10 67.0 71 46.5
CiPaw.11G095500 Carya illinoinensis HOM05D000089 ORTHO05D002844 1.0e-09 66.6 71 47.9
Hma1.2p1_0303F.1_g118970 Hydrangea macrophylla HOM05D000089 ORTHO05D002844 1.7e-09 65.9 71 45.1
Sabra03G0062900 Salix brachista HOM05D000089 ORTHO05D002844 1.7e-09 65.9 71 46.5
CiPaw.06G034900 Carya illinoinensis HOM05D000089 ORTHO05D002844 2.2e-09 65.5 71 47.9
Potri.001G140700 Populus trichocarpa HOM05D000089 ORTHO05D002844 2.9e-09 65.1 71 46.5
QL12p004806 Quercus lobata HOM05D000089 ORTHO05D002844 8.5e-09 63.5 71 43.7
Dinv25229 Davidia involucrata HOM05D000089 ORTHO05D002844 1.5e-08 62.8 71 46.5
SGA_v2.0_scaffold18G08525 Striga asiatica HOM05D000089 ORTHO05D002844 1.5e-08 62.8 71 47.9
QL09p022949 Quercus lobata HOM05D000089 ORTHO05D002844 1.9e-08 62.4 71 47.9
EL10Ac3g05055 Beta vulgaris HOM05D000089 ORTHO05D002844 3.2e-08 61.6 74 44.6
Haze_00387 Corylus avellana HOM05D000089 ORTHO05D002844 3.2e-08 61.6 71 52.1
FAN13G1435 Fragaria x ananassa HOM05D000089 ORTHO05D002844 3.2e-08 61.6 72 45.8
FAN13G1576 Fragaria x ananassa HOM05D000089 ORTHO05D002844 3.2e-08 61.6 72 45.8
Sabra01G0109500 Salix brachista HOM05D000089 ORTHO05D002844 3.2e-08 61.6 71 42.3
FAN04G0851 Fragaria x ananassa HOM05D000089 ORTHO05D002844 4.2e-08 61.2 72 45.8
SalBow4G0373 Salvia bowleyana HOM05D000089 ORTHO05D002844 4.2e-08 61.2 71 47.9
SalBow4G2575 Salvia bowleyana HOM05D000089 ORTHO05D002844 4.2e-08 61.2 71 47.9
FvH4_5g22420 Fragaria vesca HOM05D000089 ORTHO05D002844 5.5e-08 60.8 72 45.8
FAN08G1235 Fragaria x ananassa HOM05D000089 ORTHO05D002844 5.5e-08 60.8 72 45.8
FAN18G0506 Fragaria x ananassa HOM05D000089 ORTHO05D002844 5.5e-08 60.8 72 45.8
FAN18G3555 Fragaria x ananassa HOM05D000089 ORTHO05D002844 5.5e-08 60.8 72 45.8
Duzib084G1242 Durio zibethinus HOM05D000089 ORTHO05D002844 7.2e-08 60.5 70 44.3
Lj8A304G51 Lonicera japonica HOM05D000089 ORTHO05D002844 7.2e-08 60.5 70 44.3
Solyc06g061280.3 Solanum lycopersicum HOM05D000089 ORTHO05D002844 7.2e-08 60.5 71 45.1
Sopen06g021500 Solanum pennellii HOM05D000089 ORTHO05D002844 7.2e-08 60.5 71 45.1
AUR62018699 Chenopodium quinoa HOM05D000089 ORTHO05D002844 9.4e-08 60.1 73 45.2
Aqoxy3G02295 Aquilegia oxysepala HOM05D000089 ORTHO05D002844 1.6e-07 59.3 71 49.3
AUR62007304 Chenopodium quinoa HOM05D000089 ORTHO05D002844 1.6e-07 59.3 73 43.8
AUR62028200 Chenopodium quinoa HOM05D000089 ORTHO05D002844 1.6e-07 59.3 73 46.6
TPR.G8081 Trifolium pratense HOM05D000089 ORTHO05D002844 1.6e-07 59.3 71 42.3
Phvul.002G140100 Phaseolus vulgaris HOM05D000089 ORTHO05D002844 2.1e-07 58.9 71 43.7
Glyma.08G270600 Glycine max HOM05D000089 ORTHO05D002844 2.7e-07 58.5 71 45.1
Solyc03g097170.3 Solanum lycopersicum HOM05D000089 ORTHO05D002844 2.7e-07 58.5 73 46.6
Sopen03g027910 Solanum pennellii HOM05D000089 ORTHO05D002844 2.7e-07 58.5 73 46.6
Hma1.2p1_0419F.1_g149430 Hydrangea macrophylla HOM05D000089 ORTHO05D002844 3.6e-07 58.2 71 47.9
Nn3g19450 Nelumbo nucifera HOM05D000089 ORTHO05D002844 3.6e-07 58.2 71 45.1
Psat2g137160 Pisum sativum HOM05D000089 ORTHO05D002844 4.7e-07 57.8 71 43.7
Potri.013G079500 Populus trichocarpa HOM05D000089 ORTHO05D002844 4.7e-07 57.8 71 45.1
RcHm_v2.0_Chr7g0210161 Rosa chinensis HOM05D000089 ORTHO05D002844 4.7e-07 57.8 72 44.4
Thecc.03G225000 Theobroma cacao HOM05D000089 ORTHO05D002844 4.7e-07 57.8 71 45.1
COL.COLO4_16999 Corchorus olitorius HOM05D000089 ORTHO05D002844 6.1e-07 57.4 72 44.4
Migut.F00083 Erythranthe guttata HOM05D000089 ORTHO05D002844 6.1e-07 57.4 71 46.5
Glyma.01G017100 Glycine max HOM05D000089 ORTHO05D002844 6.1e-07 57.4 71 42.3
Nn1g00143 Nelumbo nucifera HOM05D000089 ORTHO05D002844 6.1e-07 57.4 72 44.4
PGSC0003DMG400007665 Solanum tuberosum HOM05D000089 ORTHO05D002844 6.1e-07 57.4 71 43.7
AUR62002083 Chenopodium quinoa HOM05D000089 ORTHO05D002844 8.0e-07 57.0 73 46.6
MBI04_g41610_MAGBIO Magnolia biondii HOM05D000089 ORTHO05D002844 8.0e-07 57.0 71 43.7
Nitab4.5_0000256g0130 Nicotiana tabacum HOM05D000089 ORTHO05D002844 8.0e-07 57.0 72 43.1
EL10Ac5g12084 Beta vulgaris HOM05D000089 ORTHO05D002844 1.0e-06 56.6 73 43.8
CDE02G1893 Ceratophyllum demersum HOM05D000089 ORTHO05D002844 1.0e-06 56.6 71 47.9
CDE12G0758 Ceratophyllum demersum HOM05D000089 ORTHO05D002844 1.0e-06 56.6 71 45.1
Lalb_Chr16g0381261 Lupinus albus HOM05D000089 ORTHO05D002844 1.0e-06 56.6 71 43.7
TWI15G0318 Tripterygium wilfordii HOM05D000089 ORTHO05D002844 1.0e-06 56.6 71 43.7
TAR375G0823 Trochodendron aralioides HOM05D000089 ORTHO05D002844 1.0e-06 56.6 71 43.7
VMungo1215G2557 Vigna mungo HOM05D000089 ORTHO05D002844 1.0e-06 56.6 71 40.8
Medtr5g029990 Medicago truncatula HOM05D000089 ORTHO05D002844 1.4e-06 56.2 71 40.8
Actinidia25976 Actinidia chinensis HOM05D000089 ORTHO05D002844 1.8e-06 55.8 71 43.7
CANSAT21G0734 Cannabis sativa HOM05D000089 ORTHO05D002844 1.8e-06 55.8 71 46.5
CDE11G0160 Ceratophyllum demersum HOM05D000089 ORTHO05D002844 1.8e-06 55.8 71 46.5
Haze_08196 Corylus avellana HOM05D000089 ORTHO05D002844 1.8e-06 55.8 71 43.7
Glyma.09G205700 Glycine max HOM05D000089 ORTHO05D002844 1.8e-06 55.8 71 40.8
Hund14347 Selenicereus undatus HOM05D000089 ORTHO05D002844 1.8e-06 55.8 72 44.4
Actinidia03363 Actinidia chinensis HOM05D000089 ORTHO05D002844 2.3e-06 55.5 71 40.8
CAN.G1131.27 Capsicum annuum HOM05D000089 ORTHO05D002844 2.3e-06 55.5 74 45.9
CDE06G0456 Ceratophyllum demersum HOM05D000089 ORTHO05D002844 2.3e-06 55.5 71 43.7
Lalb_Chr05g0215921 Lupinus albus HOM05D000089 ORTHO05D002844 2.3e-06 55.5 71 42.3
Nitab4.5_0004551g0010 Nicotiana tabacum HOM05D000089 ORTHO05D002844 2.3e-06 55.5 71 45.1
Thecc.05G218900 Theobroma cacao HOM05D000089 ORTHO05D002844 3.0e-06 55.1 70 44.3
GSVIVG01024349001 Vitis vinifera HOM05D000089 ORTHO05D002844 3.0e-06 55.1 71 42.3
Gohir.A08G155700 Gossypium hirsutum HOM05D000089 ORTHO05D002844 4.0e-06 54.7 71 43.7
Manes.09G128100 Manihot esculenta HOM05D000089 ORTHO05D002844 4.0e-06 54.7 71 45.1
Sc07g0008620 Simmondsia chinensis HOM05D000089 ORTHO05D002844 4.0e-06 54.7 71 46.5
Lj2g0026921 Lotus japonicus HOM05D000089 ORTHO05D002844 5.2e-06 54.3 71 40.8
MD00G1072500 Malus domestica HOM05D000089 ORTHO05D002844 5.2e-06 54.3 70 42.9
CsaV3_2G036590 Cucumis sativus L. HOM05D000089 ORTHO05D002844 6.8e-06 53.9 71 40.8
Duzib128G0210 Durio zibethinus HOM05D000089 ORTHO05D002844 6.8e-06 53.9 71 45.1
Prupe.5G032800 Prunus persica HOM05D000089 ORTHO05D002844 6.8e-06 53.9 72 41.7
MD06G1036600 Malus domestica HOM05D000089 ORTHO05D002844 8.8e-06 53.5 71 40.8


User provided reference genes

Program Settings