Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 2.7e-183 645.2 326 100.0
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 2.1e-34 150.6 468 28.2
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 6.7e-33 145.6 493 27.4
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 2.6e-32 143.7 493 26.6
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 5.7e-32 142.5 498 27.1
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 9.7e-32 141.7 519 25.8
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.3e-31 141.4 490 27.3
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.8e-31 140.2 506 26.9
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 2.8e-31 140.2 532 27.1
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 8.2e-31 138.7 478 26.4
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 4.5e-29 132.9 510 27.3
CDE06G0227 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 1.0e-28 131.7 88 76.1
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 1.7e-28 131.0 517 25.5
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.7e-28 131.0 482 26.6
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 2.9e-28 130.2 473 25.8
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 5.0e-28 129.4 496 26.2
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 5.0e-28 129.4 481 26.2
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.2e-26 124.8 524 25.6
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.6e-26 124.4 270 32.6
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 2.1e-26 124.0 482 25.9
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.1e-26 124.0 302 30.5
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 1.4e-25 121.3 489 23.7
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 2.3e-25 120.6 300 28.7
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 5.2e-25 119.4 506 26.5
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 5.2e-25 119.4 465 27.3
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 8.8e-25 118.6 306 29.1
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 1.5e-24 117.9 442 26.5
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 3.3e-24 116.7 301 27.9
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 3.3e-24 116.7 428 25.7
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 4.4e-24 116.3 477 25.4
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 4.4e-24 116.3 245 31.0
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 7.4e-24 115.5 302 27.5
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 9.7e-24 115.2 508 25.6
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 1.3e-23 114.8 487 25.1
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.3e-23 114.8 305 27.9
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 1.3e-23 114.8 529 23.4
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 1.7e-23 114.4 509 22.8
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 2.2e-23 114.0 451 26.6
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 2.2e-23 114.0 452 25.7
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 8.2e-23 112.1 443 26.9
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.8e-22 110.9 480 26.0
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.4e-22 110.5 524 24.6
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 2.4e-22 110.5 489 25.2
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 5.3e-22 109.4 502 25.3
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 7.0e-22 109.0 261 29.5
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 1.6e-21 107.8 485 25.4
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 4.5e-21 106.3 305 26.2
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 5.9e-21 105.9 322 25.5
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 1.3e-20 104.8 509 24.0
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.3e-20 104.8 473 22.8
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.7e-20 104.4 300 25.3
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 3.8e-20 103.2 303 26.1
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 6.5e-20 102.4 305 24.6
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 8.5e-20 102.1 340 27.1
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 1.1e-19 101.7 349 24.6
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 1.1e-19 101.7 475 24.6
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 2.5e-19 100.5 328 25.6
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 7.2e-19 99.0 489 22.9
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 7.2e-19 99.0 495 24.0
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 9.4e-19 98.6 351 23.9
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 9.4e-19 98.6 441 25.2
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 9.4e-19 98.6 504 23.4
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 1.2e-18 98.2 306 25.8
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.2e-18 98.2 307 25.7
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.2e-18 98.2 306 25.5
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 1.6e-18 97.8 300 26.7
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.6e-18 97.8 301 27.2
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 2.1e-18 97.4 494 23.7
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.1e-18 97.4 266 27.4
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 2.1e-18 97.4 266 27.4
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 2.1e-18 97.4 516 22.5
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 2.7e-18 97.1 519 22.0
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 3.6e-18 96.7 252 27.4
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 8.0e-18 95.5 301 25.2
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.4e-17 94.7 514 23.0
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 1.8e-17 94.4 212 30.2
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 4.0e-17 93.2 270 30.0
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 4.0e-17 93.2 184 34.8
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 5.2e-17 92.8 486 23.0
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 5.2e-17 92.8 374 24.6
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 6.7e-17 92.4 283 26.9
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 3.3e-16 90.1 300 25.0
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 4.4e-16 89.7 302 25.2
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 3.7e-15 86.7 529 21.2
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.1e-14 85.1 116 41.4
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 3.1e-14 83.6 178 30.3
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 5.3e-14 82.8 104 42.3
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 9.1e-14 82.0 163 33.7
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.6e-13 81.3 434 23.7
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 1.0e-12 78.6 335 28.7
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 1.0e-12 78.6 455 23.5
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 2.9e-12 77.0 460 22.6
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 6.5e-12 75.9 275 29.8
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 1.5e-11 74.7 268 23.5
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 7.2e-11 72.4 266 27.8
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 1.0e-09 68.6 278 27.7
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 6.8e-09 65.9 70 48.6
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 3.4e-08 63.5 100 33.0
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 4.4e-08 63.2 58 51.7
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 2.8e-07 60.5 83 38.6
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 4.8e-07 59.7 281 22.8
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.4e-06 58.2 71 43.7
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 1.8e-06 57.8 243 27.2
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 2.4e-06 57.4 278 25.2
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 5.4e-06 56.2 107 35.5


User provided reference genes

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