Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2642 Ceratophyllum demersum HOM05D000963 ORTHO05D005131 4.2e-89 331.3 158 100.0
LjContig00319g0011411 Lotus japonicus HOM05D000963 ORTHO05D005131 4.1e-28 128.6 168 48.2
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.9e-26 122.1 127 58.3
VMungo0464G1437 Vigna mungo HOM05D000963 ORTHO05D005131 1.8e-23 113.2 144 47.2
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.4e-22 108.6 153 44.4
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 4.9e-21 105.1 153 46.4
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 4.9e-21 105.1 153 46.4
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 4.9e-21 105.1 153 46.4
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 4.9e-21 105.1 153 46.4
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 4.9e-21 105.1 153 46.4
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 4.9e-21 105.1 153 46.4
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 6.4e-21 104.8 127 48.8
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 1.2e-19 100.5 51 94.1
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 1.2e-19 100.5 51 94.1
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-19 100.1 73 74.0
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.6e-19 100.1 50 96.0
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 1.0e-18 97.4 50 92.0
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 1.7e-18 96.7 50 90.0
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.1e-17 94.0 53 86.8
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 7.3e-17 91.3 154 42.9
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 2.1e-16 89.7 56 80.4
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 8.1e-16 87.8 51 82.4
Nitab4.5_0008813g0020 Nicotiana tabacum HOM05D033885 ORTHO05D005131 2.3e-15 86.3 63 69.8
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 5.2e-15 85.1 46 91.3
Actinidia07869 Actinidia chinensis HOM05D000001 ORTHO05D000003 4.4e-14 82.0 90 52.2
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 5.8e-14 81.6 75 58.7
Glyma.05G084600 Glycine max HOM05D000963 ORTHO05D005131 7.5e-14 81.3 53 69.8
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-14 81.3 50 80.0
Manes.02G203601 Manihot esculenta HOM05D000963 ORTHO05D005131 4.9e-13 78.6 91 50.5
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 8.3e-13 77.8 55 72.7
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.1e-12 77.4 109 43.1
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 1.1e-12 77.4 46 76.1
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.1e-12 77.4 46 78.3
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.4e-12 77.0 48 72.9
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 3.2e-12 75.9 49 77.6
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 4.1e-12 75.5 41 90.2
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.1e-12 75.5 50 74.0
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 5.4e-12 75.1 38 97.4
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 5.4e-12 75.1 48 70.8
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 9.2e-12 74.3 38 94.7
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 9.2e-12 74.3 38 94.7
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 9.2e-12 74.3 38 94.7
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 9.2e-12 74.3 38 94.7
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 9.2e-12 74.3 38 94.7
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 9.2e-12 74.3 40 92.5
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 9.2e-12 74.3 40 92.5
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 9.2e-12 74.3 38 94.7
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 9.2e-12 74.3 38 94.7
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 1.6e-11 73.6 40 90.0
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.1e-11 73.2 69 59.4
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.1e-11 73.2 69 59.4
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 2.1e-11 73.2 38 94.7
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 2.7e-11 72.8 75 53.3
HPP92_018373 Vanilla planifolia HOM05D033885 ORTHO05D005131 2.7e-11 72.8 35 94.3
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.5e-11 72.4 55 74.5
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.5e-11 72.4 37 97.3
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 3.5e-11 72.4 37 97.3
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.6e-11 72.0 38 92.1
Medtr8g040260 Medicago truncatula HOM05D000963 ORTHO05D005131 3.9e-10 68.9 56 64.3
PGSC0003DMG400003919 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.9e-10 68.9 72 54.2
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.5e-09 67.0 62 61.3
Potri.002G073450 Populus trichocarpa HOM05D000963 ORTHO05D005131 1.9e-09 66.6 58 62.1
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 1.9e-09 66.6 37 89.2
Oeu014166.1 Olea europaea HOM05D000963 ORTHO05D005131 7.3e-09 64.7 38 84.2
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.6e-08 63.5 39 76.9
BcaC04g20784 Brassica carinata HOM05D005048 ORTHO05D006420 2.8e-08 62.8 27 100.0
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.4e-07 60.5 31 93.5
Sopen06g013430 Solanum pennellii HOM05D000963 ORTHO05D026832 1.8e-07 60.1 34 85.3
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.2e-07 58.5 29 89.7
FAN17G0696 Fragaria x ananassa HOM05D027054 ORTHO05D015988 1.5e-06 57.0 98 39.8
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.0e-06 56.6 77 46.8
arahy.Tifrunner.gnm1.ann1.SH46T5 Arachis hypogaea HOM05D000963 ORTHO05D005131 7.6e-06 54.7 25 92.0
BraSC138t45524Z Brassica rapa HOM05D000963 ORTHO05D005131 7.6e-06 54.7 25 92.0
BraSC59t46511Z Brassica rapa HOM05D000963 ORTHO05D005131 7.6e-06 54.7 25 92.0
Gorai.007G252600 Gossypium raimondii HOM05D000963 ORTHO05D005131 7.6e-06 54.7 25 92.0
Lsat_1_v5_gn_4_99780 Lactuca sativa HOM05D000103 ORTHO05D000049 7.6e-06 54.7 25 92.0
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 9.9e-06 54.3 23 100.0


User provided reference genes

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