Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2615 Ceratophyllum demersum HOM05D002706 ORTHO05D012262 1.8e-35 152.1 84 100.0
CDE04G3144 Ceratophyllum demersum HOM05D002706 ORTHO05D003253 6.4e-20 100.5 63 85.7
ClCG01G002670 Citrullus lanatus HOM05D002706 ORTHO05D003253 1.1e-08 63.2 60 58.3
Lalb_Chr06g0163611 Lupinus albus HOM05D002706 ORTHO05D003253 1.5e-08 62.8 42 69.0
Phvul.002G027700 Phaseolus vulgaris HOM05D002706 ORTHO05D003253 9.6e-08 60.1 53 64.2
CsaV3_5G002780 Cucumis sativus L. HOM05D002706 ORTHO05D003253 1.6e-07 59.3 63 57.1
MBI01_g16593_MAGBIO Magnolia biondii HOM05D002706 ORTHO05D003253 1.6e-07 59.3 72 48.6
Gorai.007G209000 Gossypium raimondii HOM05D002706 ORTHO05D003253 2.1e-07 58.9 68 55.9
Potri.010G248900 Populus trichocarpa HOM05D002706 ORTHO05D003253 2.1e-07 58.9 54 63.0
Duzib192G0782 Durio zibethinus HOM05D002706 ORTHO05D003253 2.8e-07 58.5 64 56.2
Gohir.A05G115200 Gossypium hirsutum HOM05D002706 ORTHO05D003253 2.8e-07 58.5 65 58.5
Gohir.D04G102066 Gossypium hirsutum HOM05D002706 ORTHO05D012262 2.8e-07 58.5 65 58.5
Sed0016965 Sechium edule HOM05D002706 ORTHO05D003253 2.8e-07 58.5 56 57.1
TAR375G0629 Trochodendron aralioides HOM05D002706 ORTHO05D003253 2.8e-07 58.5 66 51.5
MELO3C005679.2 Cucumis melo HOM05D002706 ORTHO05D003253 3.6e-07 58.2 66 54.5
TPR.G14321 Trifolium pratense HOM05D002706 ORTHO05D003253 3.6e-07 58.2 49 55.1
Sabra10G0193900 Salix brachista HOM05D002706 ORTHO05D003253 4.7e-07 57.8 52 61.5
Ciclev10005105m.g Citrus clementina HOM05D002706 ORTHO05D003253 6.2e-07 57.4 64 50.0
Glyma.11G065500 Glycine max HOM05D002706 ORTHO05D003253 6.2e-07 57.4 56 58.9
Gorai.012G101000 Gossypium raimondii HOM05D002706 ORTHO05D003253 6.2e-07 57.4 51 64.7
Lalb_Chr21g0306911 Lupinus albus HOM05D002706 ORTHO05D003253 8.1e-07 57.0 56 53.6
TAR626G1221 Trochodendron aralioides HOM05D002706 ORTHO05D003253 8.1e-07 57.0 53 58.5
Actinidia18846 Actinidia chinensis HOM05D002706 ORTHO05D003253 1.1e-06 56.6 38 68.4
Duzib160G0388 Durio zibethinus HOM05D002706 ORTHO05D003253 1.1e-06 56.6 66 54.5
Nn1g04262 Nelumbo nucifera HOM05D002706 ORTHO05D003253 1.1e-06 56.6 66 50.0
Sed0009702 Sechium edule HOM05D002706 ORTHO05D003253 1.1e-06 56.6 66 53.0
Aqoxy5G03847 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 1.4e-06 56.2 59 50.8
Gohir.D05G115700 Gossypium hirsutum HOM05D002706 ORTHO05D003253 1.4e-06 56.2 65 56.9
Gorai.009G119700 Gossypium raimondii HOM05D002706 ORTHO05D003253 1.4e-06 56.2 65 56.9
Atru.chr12.1398 Acer truncatum HOM05D002706 ORTHO05D003253 1.8e-06 55.8 63 57.1
arahy.Tifrunner.gnm1.ann1.0UMA9Y Arachis hypogaea HOM05D002706 ORTHO05D003253 1.8e-06 55.8 38 68.4
arahy.Tifrunner.gnm1.ann1.SSK3YK Arachis hypogaea HOM05D002706 ORTHO05D003253 1.8e-06 55.8 38 68.4
CSS0035683 Camellia sinensis var. sinensis HOM05D002706 ORTHO05D003253 1.8e-06 55.8 57 57.9
CANSAT80G1781 Cannabis sativa HOM05D002706 ORTHO05D003253 1.8e-06 55.8 52 55.8
COL.COLO4_12902 Corchorus olitorius HOM05D002706 ORTHO05D003253 1.8e-06 55.8 46 63.0
GSVIVG01019752001 Vitis vinifera HOM05D002706 ORTHO05D003253 1.8e-06 55.8 59 55.9
ATR0706G210 Amborella trichopoda HOM05D002706 ORTHO05D003253 2.4e-06 55.5 45 57.8
Hma1.2p1_0325F.1_g125930 Hydrangea macrophylla HOM05D002706 ORTHO05D003253 2.4e-06 55.5 61 47.5
Lsat_1_v5_gn_5_125020 Lactuca sativa HOM05D002706 ORTHO05D003253 2.4e-06 55.5 38 65.8
Manes.01G016300 Manihot esculenta HOM05D002706 ORTHO05D003253 2.4e-06 55.5 56 57.1
Glyma.01G176800 Glycine max HOM05D002706 ORTHO05D003253 3.1e-06 55.1 55 58.2
Sc22g0005590 Simmondsia chinensis HOM05D002706 ORTHO05D003253 4.0e-06 54.7 66 45.5
Haze_00936 Corylus avellana HOM05D002706 ORTHO05D003253 5.2e-06 54.3 56 53.6
HanXRQChr10g0297421 Helianthus annuus HOM05D002706 ORTHO05D003253 5.2e-06 54.3 46 56.5
Manes.05G136800 Manihot esculenta HOM05D002706 ORTHO05D003253 5.2e-06 54.3 57 56.1
Potri.008G010201 Populus trichocarpa HOM05D002706 ORTHO05D003253 5.2e-06 54.3 54 55.6
Solyc01g109360.3 Solanum lycopersicum HOM05D002706 ORTHO05D003253 5.2e-06 54.3 45 64.4
Sopen01g051550 Solanum pennellii HOM05D002706 ORTHO05D003253 5.2e-06 54.3 45 64.4
PGSC0003DMG400025166 Solanum tuberosum HOM05D002706 ORTHO05D003253 5.2e-06 54.3 45 64.4
COL.COLO4_31141 Corchorus olitorius HOM05D002706 ORTHO05D003253 6.9e-06 53.9 67 53.7
QL12p032909 Quercus lobata HOM05D002706 ORTHO05D003253 6.9e-06 53.9 35 68.6
Hund23521 Selenicereus undatus HOM05D002706 ORTHO05D003253 6.9e-06 53.9 46 63.0
THA.LOC104812293 Tarenaya hassleriana HOM05D002706 ORTHO05D003253 6.9e-06 53.9 32 75.0
Actinidia35174 Actinidia chinensis HOM05D002706 ORTHO05D003253 9.0e-06 53.5 34 70.6
Gorai.009G397000 Gossypium raimondii HOM05D002706 ORTHO05D012262 9.0e-06 53.5 51 62.7
Prupe.5G100500 Prunus persica HOM05D002706 ORTHO05D003253 9.0e-06 53.5 53 54.7
HPP92_022522 Vanilla planifolia HOM05D002706 ORTHO05D003253 9.0e-06 53.5 34 73.5


User provided reference genes

Program Settings