Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 0.0e+00 1679.5 843 100.0
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 1.2e-139 501.5 902 39.9
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 2.6e-129 467.2 896 38.6
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 2.6e-121 440.7 903 37.2
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 5.4e-119 433.0 868 36.1
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 1.0e-117 428.7 889 35.7
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 3.7e-115 420.2 899 35.2
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 6.4e-112 409.5 900 34.2
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 1.9e-111 407.9 893 34.8
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 3.2e-111 407.1 909 35.1
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 9.3e-111 405.6 899 35.4
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 2.7e-110 404.1 894 34.3
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 1.3e-109 401.7 913 34.5
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 1.5e-108 398.3 892 34.4
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 9.6e-108 395.6 900 33.9
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 4.8e-107 393.3 828 37.1
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.4e-106 391.7 855 35.3
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 1.5e-105 388.3 899 33.7
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 6.5e-104 382.9 898 33.6
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 1.2e-102 378.6 958 32.7
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 1.0e-101 375.6 904 32.7
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 1.3e-101 375.2 901 33.3
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 3.9e-101 373.6 892 32.6
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 2.5e-100 370.9 897 32.9
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 2.5e-100 370.9 895 33.9
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 3.3e-100 370.5 887 32.9
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 9.7e-100 369.0 890 32.8
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 8.2e-99 365.9 894 32.4
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 3.1e-98 364.0 898 33.6
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 6.9e-98 362.8 901 32.1
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 2.6e-97 360.9 900 32.6
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.7e-96 358.2 894 32.0
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 5.0e-96 356.7 878 34.5
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.1e-95 355.5 914 31.7
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 1.9e-95 354.8 854 33.3
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 1.9e-95 354.8 891 32.3
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 2.5e-95 354.4 897 31.3
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 9.4e-95 352.4 578 40.3
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 1.8e-93 348.2 856 32.1
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 1.8e-93 348.2 886 31.9
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 6.7e-93 346.3 910 32.3
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 6.7e-93 346.3 837 32.5
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 5.7e-92 343.2 861 33.1
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 1.3e-91 342.0 859 32.1
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 4.8e-91 340.1 884 30.7
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 1.1e-90 339.0 902 32.2
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 3.1e-90 337.4 875 32.0
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 3.1e-90 337.4 844 31.9
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 6.9e-90 336.3 866 33.4
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 2.0e-89 334.7 873 32.2
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 2.6e-89 334.3 882 32.4
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 1.3e-88 332.0 955 31.5
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 4.2e-87 327.0 870 32.3
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 5.5e-87 326.6 862 31.4
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 9.4e-87 325.9 853 31.2
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 9.4e-87 325.9 863 31.6
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 1.2e-86 325.5 882 30.5
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 6.1e-86 323.2 877 31.1
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 6.1e-86 323.2 879 31.3
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 7.9e-86 322.8 882 30.7
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 1.0e-85 322.4 741 33.5
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 1.4e-85 322.0 883 31.3
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 1.8e-85 321.6 899 31.6
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 1.8e-85 321.6 950 30.9
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 2.3e-85 321.2 850 30.9
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 3.0e-85 320.9 850 30.9
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 6.7e-85 319.7 885 31.9
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 8.8e-85 319.3 879 31.1
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 8.8e-85 319.3 883 30.5
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 3.3e-84 317.4 852 30.8
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 3.3e-84 317.4 841 29.3
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 9.7e-84 315.8 886 31.2
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 3.7e-83 313.9 889 30.9
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 1.1e-82 312.4 861 31.6
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 1.4e-82 312.0 846 30.4
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 1.4e-82 312.0 875 30.1
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 3.1e-82 310.8 878 29.8
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 7.0e-82 309.7 860 30.8
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 9.1e-82 309.3 904 31.2
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 1.5e-81 308.5 852 30.2
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 4.5e-81 307.0 871 30.8
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 7.7e-81 306.2 699 33.8
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 1.0e-80 305.8 853 30.0
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 7.2e-79 299.7 855 29.4
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 7.2e-79 299.7 855 29.4
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 1.6e-78 298.5 853 30.5
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 3.6e-78 297.4 855 30.3
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 8.0e-78 296.2 850 30.1
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 6.7e-77 293.1 830 29.9
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 1.3e-75 288.9 884 29.5
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 9.1e-74 282.7 858 30.2
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 1.2e-73 282.3 897 29.0
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 6.1e-70 270.0 876 29.9
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 2.6e-68 264.6 906 27.5
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 4.4e-68 263.8 879 29.5
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 1.3e-67 262.3 950 27.4
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 2.7e-65 254.6 752 28.9
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 2.9e-64 251.1 633 34.0
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 1.5e-63 248.8 549 32.4
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 2.5e-63 248.1 911 27.6
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 7.5e-60 236.5 763 29.9
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 1.3e-59 235.7 755 28.9
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 4.8e-59 233.8 457 35.4
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 2.9e-56 224.6 680 31.2
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 8.6e-56 223.0 320 41.2
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 9.2e-50 203.0 647 30.9
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 7.3e-47 193.4 621 32.0
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.7e-43 182.2 497 32.2
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 4.1e-42 177.6 315 39.7
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 7.3e-39 166.8 826 23.7
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 6.2e-38 163.7 443 32.5
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 4.0e-37 161.0 171 49.7
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.9e-34 152.1 323 35.6
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 4.1e-34 151.0 365 32.3
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 1.4e-29 136.0 334 30.5
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 1.3e-27 129.4 189 42.9
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 4.9e-27 127.5 253 36.4
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 1.9e-26 125.6 267 34.8
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 1.2e-25 122.9 165 39.4
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 1.5e-23 115.9 459 27.7
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 2.5e-23 115.2 242 34.7
AagrBONN_evm.TU.Sc2ySwM_362.1777 Anthoceros agrestis HOM05D005720 ORTHO05D006984 3.8e-11 74.7 279 25.8
AagrBONN_evm.TU.Sc2ySwM_117.1094 Anthoceros agrestis HOM05D005720 ORTHO05D006984 1.7e-08 65.9 94 41.5
Pp3c15_13500 Physcomitrium patens HOM05D005720 ORTHO05D006984 6.6e-08 63.9 406 24.6
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 1.1e-07 63.2 175 30.9
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 2.8e-06 58.5 193 26.9


User provided reference genes

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