Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 0.0e+00 1714.9 881 100.0
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 4.2e-247 858.6 909 57.4
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 1.1e-226 790.8 909 53.4
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 4.1e-226 788.9 919 51.5
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 9.4e-223 777.7 899 53.1
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 1.7e-219 766.9 897 51.1
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 1.2e-217 760.8 898 51.2
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 2.7e-217 759.6 908 50.8
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 5.9e-217 758.4 911 51.6
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 6.5e-216 755.0 919 51.0
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.0e-213 747.7 906 49.8
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 2.3e-213 746.5 947 49.4
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 5.7e-212 741.9 795 54.6
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.7e-211 740.3 924 49.7
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.7e-211 740.3 924 49.8
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 5.4e-210 735.3 932 48.9
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 2.7e-209 733.0 921 50.2
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 4.5e-209 732.3 913 50.5
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 3.8e-208 729.2 924 49.6
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 2.1e-206 723.4 903 49.8
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 4.7e-206 722.2 784 54.3
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 2.3e-205 719.9 949 47.6
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 3.0e-205 719.5 929 49.1
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 9.8e-204 714.5 899 47.7
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 2.8e-203 713.0 947 49.0
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 3.7e-203 712.6 901 49.2
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 1.4e-202 710.7 919 49.8
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 4.1e-202 709.1 892 49.3
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 9.2e-202 708.0 883 48.9
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 4.6e-201 705.7 957 47.3
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 6.6e-200 701.8 933 48.7
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 1.1e-199 701.0 914 49.7
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 3.3e-199 699.5 938 48.0
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 9.5e-199 698.0 1007 47.1
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 1.2e-198 697.6 891 48.5
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 2.8e-198 696.4 987 45.7
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 3.6e-198 696.0 966 47.1
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 4.7e-198 695.7 916 46.9
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 6.1e-198 695.3 916 46.9
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 1.4e-197 694.1 943 47.4
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 1.2e-196 691.0 949 47.7
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 4.4e-196 689.1 1011 46.6
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 5.8e-196 688.7 910 48.8
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 2.2e-195 686.8 939 46.8
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 7.0e-194 681.8 940 45.9
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 1.3e-192 677.6 914 48.2
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 5.0e-192 675.6 976 46.0
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.5e-191 674.1 989 45.9
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.5e-191 674.1 958 47.1
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.2e-190 671.0 930 46.9
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 3.6e-190 669.5 922 47.3
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 6.2e-190 668.7 900 47.7
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 8.1e-190 668.3 950 46.6
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 1.4e-189 667.5 981 46.0
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.3e-189 666.8 932 47.0
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 5.8e-188 662.1 934 46.5
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 1.3e-187 661.0 949 46.2
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 1.7e-187 660.6 936 46.4
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.9e-187 659.8 945 46.2
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.9e-187 659.8 925 46.4
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 8.3e-187 658.3 920 46.2
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.1e-186 657.9 969 45.8
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 5.4e-186 655.6 927 46.4
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 5.4e-186 655.6 928 46.8
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 5.4e-186 655.6 997 44.4
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 3.9e-184 649.4 1086 41.6
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 8.6e-184 648.3 910 46.7
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 1.1e-183 647.9 895 47.5
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 3.3e-183 646.4 845 49.5
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 2.8e-182 643.3 986 44.8
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 2.8e-182 643.3 969 45.0
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 3.6e-182 642.9 1026 42.4
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.4e-181 641.0 779 50.8
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 1.8e-181 640.6 886 46.6
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 2.3e-181 640.2 987 43.5
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 3.1e-181 639.8 979 43.7
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 2.0e-180 637.1 928 46.1
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 7.6e-180 635.2 1039 43.2
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 1.7e-179 634.0 755 50.1
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 2.9e-179 633.3 913 44.0
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.1e-173 614.8 930 44.6
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 1.7e-171 607.4 811 46.5
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 1.1e-170 604.7 920 43.9
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 3.2e-170 603.2 951 43.2
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 4.2e-170 602.8 779 48.3
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 4.2e-170 602.8 926 43.1
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 2.1e-169 600.5 920 43.0
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 6.0e-169 599.0 925 43.2
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 7.8e-169 598.6 823 45.6
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 8.7e-168 595.1 823 45.1
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.1e-167 594.7 925 42.4
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 1.1e-167 594.7 778 47.3
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 1.1e-167 594.7 905 43.9
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 3.3e-167 593.2 925 43.0
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 3.3e-167 593.2 949 42.7
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 7.3e-167 592.0 805 45.6
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 2.8e-166 590.1 927 42.9
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 4.8e-166 589.3 905 42.1
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.8e-165 587.4 971 43.8
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 3.1e-165 586.6 952 43.8
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 9.0e-165 585.1 950 42.2
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 2.6e-164 583.6 923 41.7
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 1.3e-163 581.3 871 43.9
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 1.3e-163 581.3 871 43.9
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 1.7e-163 580.9 916 44.0
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.7e-163 580.9 876 42.5
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 2.4e-162 577.0 864 43.6
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 2.7e-161 573.5 916 40.9
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 2.7e-161 573.5 793 45.1
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 4.6e-161 572.8 824 44.8
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 6.0e-161 572.4 844 45.1
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 5.6e-159 565.8 977 40.5
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 2.1e-158 563.9 975 40.3
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 4.8e-158 562.8 917 42.3
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 2.0e-156 557.4 781 45.7
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.7e-155 554.3 917 39.8
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.1e-154 551.6 858 42.4
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 3.2e-154 550.1 858 42.3
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 5.5e-154 549.3 798 43.0
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.0e-152 545.0 907 40.6
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 2.4e-149 533.9 890 40.6
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 1.2e-148 531.6 897 41.5
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 2.9e-147 526.9 759 44.5
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 3.5e-145 520.0 804 43.3
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.4e-141 508.1 950 39.1
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 6.3e-134 482.6 929 40.4
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 6.5e-131 472.6 937 39.4
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 8.2e-126 455.7 952 36.9
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 2.9e-123 447.2 953 36.0
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 2.9e-123 447.2 953 36.0
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.0e-120 438.7 753 39.8
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 1.1e-117 428.7 773 39.6
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 1.6e-108 398.3 783 36.0
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 2.1e-105 387.9 661 41.1
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 3.5e-92 344.0 537 44.5
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 3.4e-87 327.4 370 51.4
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 4.9e-86 323.6 330 54.5
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.6e-73 280.8 284 53.5
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 3.1e-72 277.7 968 28.5
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 6.8e-72 276.6 245 64.1
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 2.7e-68 264.6 360 48.6
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 2.0e-55 221.9 465 36.3
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 7.8e-52 209.9 389 40.1
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 6.2e-49 200.3 367 40.3
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 2.4e-48 198.4 138 73.9
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 1.3e-43 182.6 255 42.4
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 7.1e-37 160.2 209 44.5
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 4.3e-34 151.0 125 68.0
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 4.5e-31 141.0 164 46.3
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.0e-30 139.8 239 41.4
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 9.3e-29 133.3 92 75.0
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 5.1e-27 127.5 216 43.5
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 6.7e-27 127.1 185 46.5
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 5.3e-24 117.5 86 68.6
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 2.6e-23 115.2 165 43.6
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 1.0e-22 113.2 111 53.2
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 3.8e-22 111.3 89 62.9
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 1.6e-20 105.9 89 60.7
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 1.6e-20 105.9 119 48.7
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 2.7e-20 105.1 79 67.1
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 7.9e-20 103.6 68 77.9
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 3.0e-19 101.7 171 42.1
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 1.6e-17 95.9 57 84.2
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 1.1e-16 93.2 70 67.1
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 2.0e-15 89.0 64 62.5
TAR624G1003 Trochodendron aralioides HOM05D003782 ORTHO05D004361 2.0e-15 89.0 113 49.6
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 5.0e-14 84.3 75 60.0
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 1.9e-13 82.4 126 42.9
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 7.2e-13 80.5 113 45.1
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 7.2e-13 80.5 109 45.0
TAR626G0068 Trochodendron aralioides HOM05D003782 ORTHO05D004361 2.7e-12 78.6 140 42.1
CSS0046083 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 6.1e-12 77.4 150 41.3
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 7.9e-12 77.0 59 67.8
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 6.7e-11 73.9 60 61.7
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 6.7e-11 73.9 65 55.4
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 2.0e-10 72.4 116 44.8
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 1.3e-09 69.7 64 56.2
arahy.Tifrunner.gnm1.ann1.IG0W9M Arachis hypogaea HOM05D003782 ORTHO05D004361 2.2e-09 68.9 94 40.4
MCO02G174 Micromonas commoda HOM05D003782 ORTHO05D004361 6.3e-09 67.4 299 25.4
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 1.8e-08 65.9 45 75.6
CSS0040150 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 5.3e-08 64.3 52 65.4
MBI19_g13594_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 5.9e-07 60.8 55 47.3
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 7.7e-07 60.5 107 35.5
Zm00001eb274810 Zea mays HOM05D003782 ORTHO05D004361 6.5e-06 57.4 48 58.3


User provided reference genes

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