Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE02G2516 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 8.1e-202 706.8 351 100.0
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 3.0e-119 432.6 247 90.3
Dinv17461 Davidia involucrata HOM05D002304 ORTHO05D002363 2.5e-25 120.6 291 35.4
TAR622G0924 Trochodendron aralioides HOM05D002304 ORTHO05D002363 4.2e-25 119.8 296 32.4
Dinv38639 Davidia involucrata HOM05D002304 ORTHO05D002363 7.2e-25 119.0 302 33.8
CSS0002586 Camellia sinensis var. sinensis HOM05D002304 ORTHO05D002363 4.0e-23 113.2 299 35.1
COL.COLO4_24292 Corchorus olitorius HOM05D002304 ORTHO05D002363 1.7e-21 107.8 290 32.1
Thecc.03G109300 Theobroma cacao HOM05D002304 ORTHO05D002363 1.8e-20 104.4 291 32.0
TWI81G0902 Tripterygium wilfordii HOM05D002304 ORTHO05D002363 1.2e-19 101.7 286 34.3
Atru.chr9.440 Acer truncatum HOM05D002304 ORTHO05D002363 1.6e-19 101.3 290 32.4
Duzib205G0125 Durio zibethinus HOM05D002304 ORTHO05D002363 3.5e-19 100.1 291 31.6
Cpa.g.sc3.228 Carica papaya HOM05D002304 ORTHO05D002363 7.8e-19 99.0 288 34.4
Gohir.A03G071500 Gossypium hirsutum HOM05D002304 ORTHO05D002363 7.8e-19 99.0 274 33.6
Gohir.D03G098100 Gossypium hirsutum HOM05D002304 ORTHO05D002363 7.8e-19 99.0 274 34.3
Ciclev10021188m.g Citrus clementina HOM05D002304 ORTHO05D002363 1.0e-18 98.6 291 30.9
Duzib068G0189 Durio zibethinus HOM05D002304 ORTHO05D002363 2.9e-18 97.1 291 31.3
Gorai.003G103200 Gossypium raimondii HOM05D002304 ORTHO05D002363 2.9e-18 97.1 274 33.6
QL10p020791 Quercus lobata HOM05D002304 ORTHO05D002363 1.5e-17 94.7 284 31.3
CDE01G0724 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 2.5e-17 94.0 62 79.0
Manes.06G080500 Manihot esculenta HOM05D002304 ORTHO05D002363 8.0e-16 89.0 309 29.8
Sed0007661 Sechium edule HOM05D002304 ORTHO05D002363 1.4e-15 88.2 290 32.8
MELO3C017254.2 Cucumis melo HOM05D002304 ORTHO05D002363 1.3e-13 81.6 284 30.6
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 1.7e-13 81.3 292 29.8
CsaV3_1G003310 Cucumis sativus L. HOM05D002304 ORTHO05D002363 2.2e-13 80.9 284 31.0
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 2.9e-13 80.5 291 30.2
ClCG06G015410 Citrullus lanatus HOM05D002304 ORTHO05D002363 6.4e-13 79.3 282 31.2
Sed0003351 Sechium edule HOM05D002304 ORTHO05D002363 1.4e-12 78.2 291 29.2
PSO017G5249 Papaver somniferum HOM05D002304 ORTHO05D002363 5.4e-12 76.3 319 30.4
Gorai.001G066900 Gossypium raimondii HOM05D002304 ORTHO05D002363 9.2e-12 75.5 271 29.2
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 1.2e-11 75.1 292 27.1
Gohir.A07G058500 Gossypium hirsutum HOM05D002304 ORTHO05D002363 1.2e-11 75.1 271 28.4
Gohir.D07G063400 Gossypium hirsutum HOM05D002304 ORTHO05D002363 1.6e-11 74.7 290 30.7
PGSC0003DMG400006479 Solanum tuberosum HOM05D002304 ORTHO05D002363 7.8e-11 72.4 253 29.6
Manes.09G186400 Manihot esculenta HOM05D002304 ORTHO05D002363 1.0e-10 72.0 255 30.2
Sopen05g018410 Solanum pennellii HOM05D002304 ORTHO05D002363 1.7e-10 71.2 253 29.2
MBI15_g04988_MAGBIO Magnolia biondii HOM05D002304 ORTHO05D002363 3.0e-10 70.5 311 28.6
Lsat_1_v5_gn_4_113580 Lactuca sativa HOM05D002304 ORTHO05D002363 5.0e-10 69.7 263 29.7
Medtr7g021220 Medicago truncatula HOM05D002304 ORTHO05D002363 5.0e-10 69.7 244 31.1
Sp2g23550 Schrenkiella parvula HOM05D002304 ORTHO05D002363 1.5e-09 68.2 264 27.3
Nn2g15281 Nelumbo nucifera HOM05D002304 ORTHO05D002363 2.5e-09 67.4 199 30.2
Manes.08G102500 Manihot esculenta HOM05D002304 ORTHO05D002363 9.5e-09 65.5 250 28.0
Nn3g17544 Nelumbo nucifera HOM05D002304 ORTHO05D002363 1.2e-08 65.1 41 68.3
CAN.G302.5 Capsicum annuum HOM05D002304 ORTHO05D002363 1.6e-08 64.7 248 27.8
Lsat_1_v5_gn_1_32321 Lactuca sativa HOM05D002304 ORTHO05D002363 1.6e-08 64.7 268 26.5
Solyc05g023820.3 Solanum lycopersicum HOM05D002304 ORTHO05D002363 2.1e-08 64.3 169 31.4
Nitab4.5_0001408g0050 Nicotiana tabacum HOM05D002304 ORTHO05D002363 3.6e-08 63.5 246 28.5
Thhalv10005476m.g Eutrema salsugineum HOM05D002304 ORTHO05D002363 4.7e-08 63.2 256 28.5
Eucgr.K02629 Eucalyptus grandis HOM05D002304 ORTHO05D002363 6.2e-08 62.8 261 29.5
Aqoxy5G03200 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 8.1e-08 62.4 288 26.7
HanXRQChr16g0502201 Helianthus annuus HOM05D002304 ORTHO05D002363 8.1e-08 62.4 75 48.0
Sabra03G0119800 Salix brachista HOM05D002304 ORTHO05D002363 8.1e-08 62.4 256 30.5
ClCG06G018240 Citrullus lanatus HOM05D002304 ORTHO05D002363 1.8e-07 61.2 270 27.4
Ca_07089_v3 Cicer arietinum L. HOM05D002304 ORTHO05D002363 2.3e-07 60.8 243 29.2
TPR.G21591 Trifolium pratense HOM05D002304 ORTHO05D002363 2.3e-07 60.8 247 29.6
Eucgr.G01957 Eucalyptus grandis HOM05D002304 ORTHO05D002363 3.1e-07 60.5 266 26.7
FvH4_4g22930 Fragaria vesca HOM05D002304 ORTHO05D002363 3.1e-07 60.5 243 27.6
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 3.1e-07 60.5 243 30.0
PGR083G0760 Punica granatum HOM05D002304 ORTHO05D002363 3.1e-07 60.5 254 29.5
TWI18G0895 Tripterygium wilfordii HOM05D002304 ORTHO05D002363 3.1e-07 60.5 252 27.0
Ah.03g135680 Amaranthus hybridus HOM05D002304 ORTHO05D002363 4.0e-07 60.1 257 24.1
Thhalv10010601m.g Eutrema salsugineum HOM05D002304 ORTHO05D002363 4.0e-07 60.1 260 30.0
FAN12G0561 Fragaria x ananassa HOM05D002304 ORTHO05D002363 4.0e-07 60.1 243 27.6
TPR.G2933 Trifolium pratense HOM05D002304 ORTHO05D002363 4.0e-07 60.1 246 29.7
unitig_749.g13329 Utricularia gibba HOM05D002304 ORTHO05D002363 4.0e-07 60.1 246 28.5
Lj9P484T49 Lonicera japonica HOM05D002304 ORTHO05D002363 5.2e-07 59.7 62 48.4
Lalb_Chr10g0092171 Lupinus albus HOM05D002304 ORTHO05D002363 5.2e-07 59.7 243 29.2
FAN17G3093 Fragaria x ananassa HOM05D000011 ORTHO05D000018 6.8e-07 59.3 243 28.0
Nitab4.5_0000208g0020 Nicotiana tabacum HOM05D002304 ORTHO05D002363 6.8e-07 59.3 53 58.5
VMungo1383G0264 Vigna mungo HOM05D002304 ORTHO05D002363 6.8e-07 59.3 243 30.0
Aa31LG4G17340 Aethionema arabicum HOM05D002304 ORTHO05D002363 8.9e-07 58.9 260 29.2
FAN18G4021 Fragaria x ananassa HOM05D002304 ORTHO05D002363 8.9e-07 58.9 263 29.7
Glyma.06G165800 Glycine max HOM05D002304 ORTHO05D002363 1.2e-06 58.5 247 28.7
Medtr8g099820 Medicago truncatula HOM05D002304 ORTHO05D002363 1.2e-06 58.5 264 26.1
MELO3C026174.2 Cucumis melo HOM05D002304 ORTHO05D002363 1.5e-06 58.2 275 25.5
MD16G1128400 Malus domestica HOM05D002304 ORTHO05D002363 1.5e-06 58.2 252 29.4
Mapoly0108s0003 Marchantia polymorpha HOM05D002304 ORTHO05D002363 1.5e-06 58.2 56 53.6
Mapoly0110s0051 Marchantia polymorpha HOM05D002304 ORTHO05D002363 1.5e-06 58.2 56 53.6
Nitab4.5_0000060g0010 Nicotiana tabacum HOM05D002304 ORTHO05D002363 1.5e-06 58.2 246 28.0
VMungo1127G0264 Vigna mungo HOM05D002304 ORTHO05D002363 1.5e-06 58.2 38 63.2
CsaV3_1G000210 Cucumis sativus L. HOM05D002304 ORTHO05D002363 2.0e-06 57.8 275 25.8
Gohir.A09G247800 Gossypium hirsutum HOM05D002304 ORTHO05D002363 2.0e-06 57.8 255 27.5
Gorai.006G272900 Gossypium raimondii HOM05D002304 ORTHO05D002363 2.0e-06 57.8 257 27.2
Lsat_1_v5_gn_5_10720 Lactuca sativa HOM05D002304 ORTHO05D002363 2.0e-06 57.8 263 25.9
Potri.001G062800 Populus trichocarpa HOM05D002304 ORTHO05D002363 2.0e-06 57.8 253 29.2
CARHR157610 Cardamine hirsuta HOM05D002304 ORTHO05D002363 3.4e-06 57.0 254 28.3
FvH4_5g09120 Fragaria vesca HOM05D002304 ORTHO05D002363 3.4e-06 57.0 256 29.3
Gohir.D09G248600 Gossypium hirsutum HOM05D002304 ORTHO05D002363 3.4e-06 57.0 258 27.1
QL03p049930 Quercus lobata HOM05D002304 ORTHO05D002363 3.4e-06 57.0 264 27.3
Sc11g0000170 Simmondsia chinensis HOM05D002304 ORTHO05D002363 3.4e-06 57.0 43 53.5
SGA_v2.0_scaffold72G24181 Striga asiatica HOM05D002304 ORTHO05D002363 3.4e-06 57.0 134 29.9
vmacro16745 Vaccinium macrocarpon HOM05D002304 ORTHO05D002363 3.4e-06 57.0 269 26.8
Gohir.D12G195000 Gossypium hirsutum HOM05D002304 ORTHO05D002363 4.4e-06 56.6 271 28.4
EL10Ac6g13591 Beta vulgaris HOM05D002304 ORTHO05D002363 5.8e-06 56.2 38 57.9
Phvul.009G163900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 5.8e-06 56.2 67 43.3
PGR119G0501 Punica granatum HOM05D002304 ORTHO05D002363 5.8e-06 56.2 38 57.9
SMO364G0391 Selaginella moellendorffii HOM05D002304 ORTHO05D002363 5.8e-06 56.2 93 38.7
TAR374G0191 Trochodendron aralioides HOM05D002304 ORTHO05D002363 5.8e-06 56.2 286 26.6
BcaNung01848 Brassica carinata HOM05D002304 ORTHO05D002363 7.5e-06 55.8 38 63.2
BcaNung01850 Brassica carinata HOM05D002304 ORTHO05D002363 7.5e-06 55.8 38 63.2
Lalb_Chr13g0297071 Lupinus albus HOM05D002304 ORTHO05D002363 7.5e-06 55.8 63 42.9
MD04G1000300 Malus domestica HOM05D002304 ORTHO05D002363 7.5e-06 55.8 38 57.9
TWI75G1229 Tripterygium wilfordii HOM05D002304 ORTHO05D002363 7.5e-06 55.8 249 26.5
Cc04_g09450 Coffea canephora HOM05D002304 ORTHO05D002363 9.8e-06 55.5 272 26.5
Lalb_Chr07g0183691 Lupinus albus HOM05D002304 ORTHO05D002363 9.8e-06 55.5 251 25.1
Sabra01G0045200 Salix brachista HOM05D002304 ORTHO05D002363 9.8e-06 55.5 252 27.0
unitig_26.g10424 Utricularia gibba HOM05D002304 ORTHO05D002363 9.8e-06 55.5 252 26.2


User provided reference genes

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